Embiotoca jacksoni (black perch): 138208211
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Entry
138208211 CDS
T10523
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eja03041
]
138208211
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138208211
Spliceosome [BR:
eja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138208211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138208211
NCBI-ProteinID:
XP_069022045
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MRGGSSYGDRDRDRDRDRGRDRPRFGATSGRGGPPPMKFGNPGERLRKKRWNLDELPKFE
KNFYSEHPEIQHMTPFDMEEFRRKKEITIRGAGCPKAVTAFHQAKFPQYVMDVLMHQNFK
EPTAIQAQGFPVALSGCDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAP
TRELAQQVQQVSYEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESG
KTNLRRCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKDVRQLAEDFLR
NYVQINVGALELSANHNILQIVDVCMETEKDNKLFQLMEEIMAEKENKTIIFVETKKRCD
DLTRRMRRDGWPGMCIHGDKSQPERDWVLAEFRSGKAPILIATDVASRGLDVEDVKFVIN
YDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQFV
GSGRGGGGGGGGGGGRMRYRGNNSNNPNIMFQEVCDRRIRSGGDGKDGRSGFNSRNSRDA
ERSSSSYRDRSRDRRTGYGSASDQYQSYGGGGGGGYNSRSGVQSGGGGGQNQPGELHAPF
GPALPPPPPPPTSGGPLPLMAQQFAASQPLLMGFTGQLPYPFGSPPPPPPGPHPK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagggtcctcctatggagacagagacagagacagagacagagaccgcggacga
gacaggccacggttcggggccacgagcggtcgcggtggaccgccgccaatgaagtttggg
aatccgggagaacgcctccgcaagaagaggtggaacctggacgagctgccaaagtttgag
aaaaacttctactctgaacaccctgaaatccaacacatgactccgttcgacatggaagag
tttcgcagaaagaaggagatcaccatcagaggcgccggctgtccgaaggctgtcactgct
tttcaccaggcgaagtttcctcagtacgtgatggatgtgctgatgcatcagaacttcaag
gagcccacagcgatccaggctcagggtttccccgtcgccctgagcggctgcgacatggtg
ggaatcgcacagacgggctccggaaagacgctggcttaccttcttcctgctatcgtgcac
attaaccaccagccctatctggagaggggagatggtcccatttgtctggtgctcgccccg
accagagagctggcgcagcaggttcagcaggtctcgtacgagtacggcaagtcttcacgt
atcaaaagcacctgtgtctacggtggagcgcccaaaggacctcagatcagagacctggag
aggggtgttgagatctgcatcgccacacctggtcgcctcattgacttcttggagtcgggg
aagaccaacctgcggcgctgcacctacctggtgctggatgaggcggaccgcatgttggac
atgggctttgaaccgcagattcgcaagatactcgatcagatcaggcccgacagacagact
ctgatgtggagtgcgacgtggccgaaggatgttcggcagctcgccgaggacttcttgagg
aactacgtccagatcaacgtcggcgctctggagctcagcgccaaccacaacatcctgcag
atcgtcgatgtctgcatggagacggagaaggacaacaaactctttcagctgatggaggag
atcatggctgaaaaggagaacaaaaccatcatctttgtggagacgaagaaacgctgtgac
gatctcacgaggaggatgaggcgcgacgggtggccgggcatgtgtatccatggagacaag
agccagccagagagggactgggtactcgcagaatttcggagcggcaaagctcccatcctg
atcgccacggatgtcgcctctcgtggtctggatgtggaagatgtgaagttcgtcatcaac
tatgactatcccaactcctctgaggattacgtccatcgtattggacgtacggcccgcagt
accaacaagggcaccgcctacaccttcttcaccccggggaacctgcggcaggcccgagac
cttgtccgggtgttggaggaggcccggcaagccatcaatcctaaactacttcagtttgtg
ggctccggccgtggaggaggaggaggaggaggaggaggcggcggcagaatgcgttaccgt
ggcaacaactccaacaaccccaacatcatgttccaggaggtgtgcgatcggcgcatacgc
tccggcggagacggcaaagacggccgcagcggcttcaacagccgcaacagccgcgacgca
gagcgctcgtcgtcctcctaccgggacagaagccgggaccgcagaaccggctacggctcg
gcctcggatcagtaccagagctacggcggcggcggcggcggcggctacaactcccgcagc
ggagtccagtccggcggcggcggaggtcagaaccagcccggtgagctgcacgctccgttc
ggcccggctctgcctcctcctcctcctcctcctacgtcgggggggccgctgccgctgatg
gctcagcagtttgcagcatcacagccgctgctcatgggcttcacggggcaactgccatac
ccgtttggttcccctcccccccctcctccgggcccacatccaaagtag
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