Embiotoca jacksoni (black perch): 138208226
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Entry
138208226 CDS
T10523
Symbol
ccdc88aa
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
eja Embiotoca jacksoni (black perch)
Brite
Cilium and associated proteins [BR:
eja03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138208226 (ccdc88aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138208226
NCBI-ProteinID:
XP_069022063
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Position
Unknown
AA seq
1761 aa
AA seq
DB search
MESGVFLPCLDQFMLSPLVTWVKTFVPDDGGMQLDFSELLDGIFLNDIMTQINPSVAPQG
ANKVSTDPSQRIHNLNFLVQQIKTCYLDNLRQLIMIPLPNVLLLGRTPYCEQSLDEMKKL
LLLLLGCAVQCERKEEYIERIQTLDFDTKAAIAAHIQELTHSQENVLDLQWMESSEVHPD
EMEAAARNMAAHLRLLLDQRDAHLETIAELMQEKDGVVSLLSSPSSPQSAIYSPSMQQQQ
QVGAQQHLAVELADSKAKIRRLRQELEEKSEQMLDGRHELENMEAELKRIQQENSQLLVD
ARAARTYRDELDALRERAIKADKLESEVGRYREQLHKIEFYKAKVEELKEDNRVLQETKE
VLEDQLEGWRARSDRIHQLEKHSLLLKARVHDMEQEKEADRRRTEELQEENLALCLAQRR
SMEESQHLGWELEQLSKTTENSQGQQTVSEEVSERTRSRMLKLEKENQSLLRTIEEFRAA
SINNSTQTKHGRQVVCNTNNCTSSADESSAVQTSCSNTENHTNGFPRSLVTQQMLFGDSN
CHQRLHTEELEGVQSEILLAENPHLHIREKGQLEDGGSAEHFKEMMSDLEVLENNHNRLC
CLVGSRDRSPGSKSSSPCHDSILTGLPTRSSYASKQTQRLEAKCRALDTVNQHLQTSLDN
ADRRVQRLEAEVQELEAENQSLQATLEELRISARRLEQLETEKQSLEHETTALERDKRQL
EKENRRLRQQTEIQEANLDSSNVCMASLEKELRSLVKEVEGLRETAERVKGLERDNRELS
KQAAIDQRTLTTLREELVSEKLKTQQRGNELERLAYELEMKVLNQESTQQAEQEPPDNSR
FKMLESELESSLKKSLQIKDDKIAALEARLQESSSLNQQLRQELRTVKLSYEALQQRQEE
ESTTSSSTPPRESGRVVSEWLRESQEATKELLKLKDRLIEVERNNATLEAESQAMHAQLK
QLESQSDSQQAQILALQRQAASLQENNTALQTHNANLQVEKSTLNSQSASLMAQNAQLQQ
HRSGTESERDGAVREREELRGFHEQLLRDHERLAVLHERQAVEYETLMGKHGCLKNAHRT
LELEHRTLQDRYNSLLQQRNKLEDLEKALKEEQIRMTLEKEQHRTTASECCRLRDEKDWL
NQTYRQLLNDNEVLTADHKQLKSQLNEAKLEHTWLEADFSKLKKDFQQLDITSTKLTNQC
ELLNQLKGNLEEENRHLLNQIETLMLQNRTLLEQTMQSKDLFHVEERQYIDKLNDLRRQK
EKLEEKIMDQYKFYEPSPPRRRGNWITLKLKKLMKSNSREHGPERPRTPTHSSAAEPHIS
CHDNRSFLSSDGSGGSASTSAGDAISPQRNSTTLKMFPRMRNRLKDRDKVKSLFRRSMYK
DSNDSAVPSGYEDNDELQNHGLNGVQSRAHSESSGEFNVSLENEPWSNGSSPVQRPPSRR
SSSSYQPPSDASTPQHTKQKEKEKASTMPTTNSSRIQSTPKQRQPVMSQDFWLTRGTKSI
RRGSRGKVTRRSSDSGGKINPALNGMISKLSCSKVEATRASACSPITVLYVQGKSSSMSG
CLNCFSTPLGKEVRLKGSRSPKSLPRASSVISTAEGSSRHSSVSSECRMTPKTDALPVQV
SEERHNQEETSSQKQQPDTKSSEPVPSAPVKPPRDPAAVPTEQPRSPVQESLLGSSFTFN
SVFSNTIFSDSVVTAATSLDVLDTHQTSLCPNPPTLQNCPLSQETADDDTPQMLLDSQKE
PSPNAEPAAGLEGRDEPLTVT
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggagtttttctgccctgtctggatcagttcatgctgagcccacttgtcact
tgggtgaagacattcgtgccggatgatggaggcatgcagttggatttctccgagctgctg
gatggaatctttttgaacgacataatgactcaaataaacccctcagttgcaccgcagggt
gcaaacaaagtgagcacagatccgagtcagcggatccacaacctgaactttcttgtgcag
caaatcaagacgtgttatctggataatctgagacaattaatcatgataccgttgccaaac
gtgttgctgcttggccggactccttactgtgaacaaagtctggatgaaatgaagaaactc
ttgctgttgctgttgggatgtgccgtccagtgtgagaggaaagaggagtacatcgagagg
atccagacgcttgacttcgacactaaagctgcaatagctgcacatatccaggagttgacc
cacagtcaggagaacgtgctggatctccagtggatggagtccagcgaggtgcatccagac
gagatggaggccgcagcgaggaacatggccgcacacctgcgactcctgctggaccagagg
gacgcccatctggagaccatcgcagagctcatgcaggaaaaggacggtgtggtgagtttg
ctcagtagtccgtccagcccgcagtctgccatctactctcccagcatgcagcagcagcag
caggtgggggcccagcaacacctggcggtggagctggctgactccaaggccaagatcaga
cgactcagacaagaactagaggagaagagtgagcagatgctggacggcagacatgagctg
gagaacatggaggcggagctgaagaggatccagcaggagaactcacagctgctcgtggac
gctcgtgcagctcgaacgtaccgcgacgagctggacgccctgagagagagagccatcaag
gcggacaagctggagagtgaagtgggacgttacagggagcagctgcacaagatcgagttc
tacaaggccaaagtggaggagctgaaggaggataacagggtgctgcaggagaccaaagag
gttttggaggatcagctggaaggctggagagcccgctcagatagaatccaccagctggag
aagcacagtctgctgctgaaggcccgggtccacgacatggagcaggagaaggaggccgat
cggaggcgcaccgaggagttgcaggaggagaacctggctttgtgtttggctcagagaagg
agcatggaggagtcccaacacctgggctgggagttagagcagctctccaagaccacggaa
aactcccagggccaacagactgtgagcgaggaggtcagtgagaggacacgcagtcggatg
ctgaagctggagaaggagaaccaaagtctcctgaggaccatcgaggagttccgagctgct
tctattaataacagcacgcaaaccaaacacggccggcaggtggtgtgtaacaccaacaac
tgtacctcatcagcagacgagtcctcagcggtgcaaacctcctgctcaaacacggaaaac
cacactaacggattccctcgtagtttagtaacacagcagatgctgtttggagattcaaac
tgccaccagcgactccacacggaggagctggagggagtccagagcgagatcctcctcgca
gagaatccgcatctccacattcgggagaaaggacagctggaggacggaggcagcgcagag
catttcaaagaaatgatgtctgatctggaagtcttagaaaacaatcacaatcggctgtgt
tgtttggtcggctcacgtgaccgctcgcccggctcaaagagcagcagtccgtgccacgac
agcatcctcaccggcctgccaacacgctcctcctacgccagcaagcaaacccagcggctg
gaggccaagtgcagggccctggacacggttaaccagcatctacagacctcacttgacaac
gcggaccggagagttcagcgtctggaggcggaggttcaggagctggaagcagagaaccag
agtctgcaggccaccttagaagaactcaggatctctgcaagacgcctggagcaactggaa
acagagaagcagagccttgagcacgaaactactgctctggagagagacaagaggcagctg
gagaaggagaatcgacgcctccggcagcaaacggagatccaggaggccaacttagacagc
agtaacgtctgcatggcgagcttggaaaaggagctgcgttctctggtgaaggaggtggag
gggttgagggaaactgctgagcgggtcaaaggcctggagagagacaacagagaactgagc
aagcaggcagctatcgaccagaggacgctgacaaccctccgagaggagctggtgagtgag
aagctgaagacccagcagagaggcaatgaactggagcggctggcctatgagctggagatg
aaggtcctgaaccaggagagcacgcagcaggcagaacaagagccgccagacaacagcagg
ttcaagatgctggagtcagagctggaatcatctctgaaaaagtctctgcagattaaagac
gacaagatagccgctctggaggctcgtctgcaggagtcctcctccctcaaccagcagctg
cgccaggagctgaggactgtgaagctgagttatgaggccttgcagcagaggcaggaggag
gagtcaacgacatcaagctccacccctccgagagagagcgggagagtcgtgagcgagtgg
ctgcgtgaaagtcaggaagctaccaaagaactgctgaagctcaaagaccgcctcatcgaa
gtcgagagaaataatgcgacactggaggcggagagtcaggcgatgcacgcccagttgaag
cagttggagagtcagtctgacagtcagcaggctcagatcctcgccctgcagaggcaggct
gcctcgctgcaggagaacaacacagctctgcagacgcacaacgctaacctgcaggtggag
aagtctacgctgaactcccagagtgcctccctcatggcccagaatgctcagctgcagcag
caccggtcggggacggagagcgagcgggacggagccgtacgggaacgcgaggagctgcgc
ggctttcacgagcagctgctacgagatcacgagcggctggcggttctgcatgagcgacaa
gccgtggagtacgaaaccctgatgggcaaacatggctgtttgaaaaacgcccaccgcact
ctggaactggagcatcgcacgctgcaggacagatataacagcttgttgcagcagcgcaac
aagctggaggatctggagaaagccctgaaggaggaacagatcaggatgactctggagaaa
gagcagcacaggacgactgcttccgaatgctgccggctccgtgatgagaaggactggctg
aaccagacgtaccgtcagcttctcaacgacaacgaggttctgacggcggatcacaagcag
ctcaagagtcagctgaacgaggccaagctggagcacacctggctggaggccgacttctcc
aagctcaaaaaggactttcagcagctggacatcacctccacaaaactcaccaaccagtgt
gaattgctgaaccagttgaagggaaacctcgaggaggagaatcgccacctgctcaaccag
attgaaaccttgatgctacagaaccggacgttgttggagcagacgatgcaaagcaaggat
ctgtttcacgtcgaagagcgacagtacattgacaagctaaatgatttaaggaggcagaag
gagaagctggaggaaaagataatggaccagtataagttttatgagccctcgcctcctcgc
agacgtggcaactggataactctgaagctgaagaagctgatgaaatccaacagccgtgag
catggacctgaacgcccacgcacccccacgcactccagcgctgccgagcctcacatctcc
tgtcacgacaacagatccttcctcagctcagatggctccggaggctccgcctccacttct
gcaggtgacgccatctcaccccaacgcaacagcaccactctgaaaatgtttccccgtatg
aggaacaggctgaaggacagagacaaagtcaagtccctcttccgtcgttccatgtacaag
gattcaaacgacagcgccgtgccatctggatatgaggacaatgacgagctgcagaatcac
gggctgaatggggtccagagtcgagcccacagcgagagcagcggtgagttcaacgtgagc
ctggagaatgagccgtggtctaacggcagcagtccggtccagcggccgccgtcacgccgc
tcctcctcctcctaccagccgcccagtgacgcctccaccccccaacacaccaagcagaag
gagaaggagaaggcctccaccatgcccacaaccaacagctcacgcatccagtcaacacca
aaacagagacagccggtgatgtcgcaggacttctggctcacaagggggacgaagagcatc
cgaagggggtccagagggaaggtgacccgtcgctcgtcagactcgggaggcaaaatcaac
ccagcgctcaacgggatgatttcaaagttgagctgcagcaaagttgaagcgacccgagcc
tccgcctgctcaccgatcacagtgctgtatgttcagggtaagtcgtcctcaatgtcgggc
tgcctcaactgcttctccacccctctggggaaggaggtgcgactgaaagggtccaggtcg
ccgaaaagtctcccccgagccagcagtgtgatctccacagcagagggctcgtcccggcac
tccagcgtgagcagcgagtgcaggatgacacccaaaactgacgcactccccgtccaggtt
tcagaggagagacacaatcaggaggaaacatcgagtcagaaacagcaaccagacactaag
agcagcgagccggtgcccagcgcgcccgtcaaaccccccagagacccggcggcggtgccc
accgagcagcccaggtctccggtgcaggagtcgcttttaggctcctcgttcacgttcaac
tccgtcttctcaaacaccatcttcagcgattctgtggtcactgccgcgaccagtctggac
gtgctcgacacccaccagacctccctctgcccgaatccacctacgctgcaaaactgccca
ctcagccaggaaactgccgacgacgacacaccgcagatgctgctggactcgcagaaagag
ccgagtccaaatgcagaacctgcagctgggctggaagggagagacgagccgctcacggtt
acataa
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integrated database retrieval system