Embiotoca jacksoni (black perch): 138208234
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Entry
138208234 CDS
T10523
Symbol
htt
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138208234 (htt)
04131 Membrane trafficking [BR:
eja04131
]
138208234 (htt)
03029 Mitochondrial biogenesis [BR:
eja03029
]
138208234 (htt)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138208234 (htt)
Membrane trafficking [BR:
eja04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138208234 (htt)
Mitochondrial biogenesis [BR:
eja03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
138208234 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
138208234
NCBI-ProteinID:
XP_069022078
LinkDB
All DBs
Position
Unknown
AA seq
3157 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLSRITKRQEETVQETLAAAMPKI
MACLGHFANDGEIKVLLKSFVANLKSSSPTIRRTAASSAVGVCQHSRRTSYFYTWLLNVL
LGLVVPVDEEHPSHLILGVLLTLRYLMPLLQQQVNTTSLKGSFGVMRKEADVQPTPEQLL
QVYELTLHYTQHWDHNVVTAALELLQQVFRTPPPELLHMLITAGSIAHGTVFRQDIESRA
RSGSILELIAGGGSSCSPLLLRKQRGKILSGEEDGLEDDPERTEVTPGAFTASVVGADGS
SAAQVDIITEQPRSSQHTLQPGDSVDLSASSEQGGGGGTSASGTPESPNENEEEMLSRSS
SGGANITPETADYTTPENATPEGGPLGEGGTLLSTNDRSLPPSDSSQTTTEGPDSAVTPS
DVAELVLDGSESQYSGMQIGTLQDEEDEGAPSSSQEEPLEPFAQSALALSKPHLFEGRGH
NRQGSDSSVDRFIPKDEPAEPEPDNKPSRIKGPIGHYTDKGVEPLVHCVRLLSASFLLTG
QKNGLIPDKEVRVSVKALAVSCVGAAAALHPEAFFNSLYLEPLDGLPVEEQQYISDVLCL
IDHGDPQIRGATAILCGAIIQAALTKTRYNIHTWLASVQSATGNPVSLVDLVPLLRKTLK
DVSSVTCKMACSAVRHCIMTVCSSTLSELGLQLVIDLFALRDSSYWLVRTELLETLAELD
FRLVNFLERKTETLHKGDHHYTGRLRLQERVLNDVVIRLLGDDDPRVRHVAASTVSRLVP
RLFYDCDQGQVDPVVAIARDQSSVYLQLLMHEAQPPSQFTVSTITRTYRGFNLSSAVSDV
TLENNLSRVVTAVSHAFTSSTSRALTFGCCEALCLLASNFPVGTWSTGWHCGYVSSSSHF
SSRSSLNRSRGRALSLSQPSAAPSSSTTSSAPDTERRTLTVGMANMVLSLLSSAWFPLDL
SSHQDALLLSGNLLAAVAPKCMRNPWAGEEEGSSGNTSGGPNKMEEPWAALSERSLVVMV
EQLFSHLMKVLNICAHVLDDTPPGPAVKAALPSLSNTPSLSPIRRKGKEKEGVEPSVAPM
SPKKSNEVNTGRPADGTGSTAVNKSTTLGSFYHLPPYLKLYDVLKATHTNYKVTLDLHSS
QEKFGSFLRSTLDVLSQLLELATLHDIGKCVEEILGYLKSCFSREPTMATVCVQQLLKTL
FGTNLASQYEGVLSGPSRSQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMV
QAEHEQDTSGWFDVMQKASNQLRSNIANATRNRGDKNAIHNHIRLFEPLVIKALKQYTTS
TSVALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFF
FLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKAD
AGKELDTQKEVVVSMLLRLVQHHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMIA
RQQMHLDSPEALGVLNTLFETVAPSSLRPVDMLLKSMFTIPATMASVATVQLWVSGILAV
LRVLVSQSTEDIVLSRVHELSLSPHLLSCLTIRRLHQPSPFSSDPPAADTLGSQEANGEA
QKAPPEETFARFLLQLVGVLLDDISTRQVKVDITEQQHTFYCQQLGTLLMCLIHVFKSGM
FRRITAAASRLLKGENGGGQTGTEISLFYPLEGLNSMVQCLITTHPSLVLLWCQVLLIIN
YTNYSWWAEVHQTPKRHSLSCTKLLSPQSLGEGEEEKPESRLAMVNREIVRRGALILFCD
YVCQNLHDSEHLTWLIVNHVRDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCDNL
TTPTMLKKTLQCLEGIHLSQSGSLLMLYVDKLLSTPFRVLARMVDTLACRRVEMLLAETL
QNSVAQLPVEELDRIQEYLQTSGLAQRHQRFYSLLDRFRATVADKSSPTPPVTSHPLDGD
PPPAPELVIADKEWYVALVKSQCCLRGDVSLLETTELLTKLPPADLFNTMSCKEFNLSLL
CPCLSMGVQRLARGQGSLLLETALQVTLEQLAGVTGSLPAPHQSFLPPPQPQPYWHQLGD
VYDEPSFYPRVLSLCRALSQYLLSVSQLPSSLHIPSDKEHLITTFTCTAAEVVVWRLLQD
HLPLSVDLQWALSCLCLALQQPCVWNKLSTPEYSTHTCSLIYCLRLTIAAVAVSPGDQLL
HPEKKKAKGDRDDEGDQVDSAHAGHMIEWQACEIMAELVEGLQSVLSLGHHRNCVFPAFL
TPTLRNIVISLSRLPLVNSYTRVPPLVWKLGWSPQPGGEFGTTLPEIPVDFLQEKDVFRE
FLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAIT
SLVLSAMTLPTAGNPAVSCLEQQPRNKSLKALETRFGRKLAVIRGEVEREIQALVSKRDN
IHTHHPYHAWDPVPSLSAASAGTLISHEKLLLQINTERELGNMDYKLGQVSIHSVWLGNN
ITPLREEEWGEDEEDDADTPAPTSPPLSPINSRKHRAGVDIHSCSQFLLELYSQWLIPGS
PSNRRTPTILISEVVRSLLAVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLVPAI
CKAAAVLGMDKAIAEPVCRLLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPTV
SEYLLSNLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFMAGVIQLCGVMVSAS
EDSTPSVIYHCVLRGLERLLLSEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTCM
YTGKEKASPAGRPAHSDPQAPDSESIIVAMERVSVLFDRIRKGLPSEARVVSRILPQFLD
DFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQ
RTPVAMAMWSLSCFFVSASTSQWISALLPHVISRMGSSEVVDVNLFCLVAMDFYRHQIDE
ELDRRAFQSVFETVASPGSPYYQLLGCLQSIHQDTSL
NT seq
9474 nt
NT seq
+upstream
nt +downstream
nt
atggccacgatggagaaactgatgaaggccttcgagtctctgaagtctttccagcagcag
cagggaccgccgaccgccgaggagctcgtccagagacaaaaaaaggagcaagccaccaca
aagaaggacagggtgacccactgcttgacaatatgtgaaaacattgtggctcagtcactg
agaacatccccagagtttcagaaactgcttggcatcgccatggagatgttcctgctctgc
agtgatgacagcgaatcagatgtccggatggtagccgatgagtgcctgaacaaaatcatc
aaagcgctgatggactccaacttgcctcgactgcagctggagctgtacaaagaaattaaa
aagaacggtgcctctcggagtctgagggcagccttgtggaggtttgctgagctcgcccac
ctcatcagaccgcagaaatgcagaccttatctggtcaacctgctgccgtgcctctccaga
atcactaagcggcaggaggagacggtgcaggagacactggctgcagcaatgcccaagatc
atggcgtgcttgggacactttgccaatgacggcgagatcaaggtgctgctcaagtctttc
gtggccaacctgaagtccagctctcccacgatcagacggacggccgccagctcggccgtc
ggcgtgtgccaacactccagacgcaccagctacttctacacctggctccttaatgtgctg
ctgggcctggtggttcctgtggatgaagaacatcccagccacctgattctgggggtgctg
ctgacccttcgctacctgatgcccctcctgcagcagcaagtcaacaccaccagcctcaaa
ggaagctttggagtcatgagaaaagaggctgatgttcagccgacacctgaacaactgctg
caggtgtacgagctgaccctgcactacacgcagcactgggatcacaacgtggtcacagct
gctctggagctcctgcagcaggtgttcaggacccccccgccggagctcctgcacatgctc
atcaccgccggcagcattgcacacggcaccgtcttccgccaggacatcgagagccgcgcg
cgctctggcagcatcctcgagctaattgcagggggagggtcctcctgcagtccactcctt
ctcaggaaacagagaggtaaaatactttctggggaggaggatggtttggaggatgacccc
gagaggactgaggtcactcctggtgccttcacagcgtcggtcgtcggtgcggacggctcc
tctgcggctcaggtcgacatcattaccgagcagccacgttcctctcagcacactctgcag
cccggtgactccgtggacctcagcgcctcctcggagcaaggcggcggcggcgggacgtcc
gcgtcgggcactcccgagtcacccaatgaaaacgaggaggaaatgctgagtcggagctcc
agcggcggggccaacattaccccggagacggccgactacaccacgccggagaacgccact
ccagaaggaggacccctgggagaaggcggcacactactaagcactaatgatcgctcgctt
ccacccagcgactcctcccagaccaccacggagggcccggactccgccgtcaccccttca
gatgtagcagaactggtcctggatggcagtgagagtcagtactctgggatgcagatcgga
acactacaggatgaagaagatgaaggagcaccatcttcctcccaagaagaacccctagaa
ccgttcgcacagtcagcgctggctctgagcaagcctcatctcttcgaaggccgaggtcac
aaccgacagggttcagacagcagtgtggaccgcttcataccaaaggacgaacccgccgaa
cccgaacctgataataagccatcacggataaagggtccgattggacactatacagacaag
ggggtggagccactggtgcactgtgtgcggcttctttctgcttccttcctgctgacaggg
caaaaaaatggtttgattcctgacaaagaggtgcgagtgagtgtgaaggccttggcggtc
agctgtgttggagccgcagcagcgctgcatcctgaagccttctttaactccctctacctg
gagccgctggacggcctcccagtagaagagcagcagtatatcagtgatgtcctgtgcctc
atcgaccacggggacccccagatcagaggggccacggccatcctctgtggagccatcata
caggccgcactcaccaaaacacgctacaacatacacacttggctggccagtgtgcagagc
gcaacaggtaaccctgtgtccctggtggacttggtacctttgctccggaaaactctgaaa
gacgtatcctccgtcacctgcaagatggcgtgctctgcagtgaggcactgcatcatgacc
gtgtgcagcagcaccctgagtgagctcggcctgcagttggtcatagacctgtttgcattg
agggactcctcctattggctcgttcgcactgagctcttggaaactctggctgagttggac
ttccgattagttaatttcttggagaggaaaactgagacgttgcataaaggagatcatcac
tacactgggcggctgcggctgcaagaacgagtcctgaacgatgtggtcatacgtctgttg
ggagatgatgatccgagagtgcgacacgtggccgcctctactgtcagcagactggttccc
aggttgttctatgactgcgaccagggccaggtggacccggtcgtggcgatcgcccgggac
cagagttcagtctacctgcagctgcttatgcatgaggcacaacccccctcccagttcacc
gttagcacaatcacaaggacgtaccgaggcttcaacctgtccagcgccgtctccgatgtc
acgttggagaacaacttgtccagagttgtcactgccgtctctcacgctttcacctcgtcc
acctccagagccctaactttcggctgctgtgaggctttgtgcctcctggcttcaaatttt
ccggtgggcacttggagcaccggctggcactgtggctacgtcagctccagcagccacttc
tcttcccgttctagtctgaaccgcagcagaggcagagccctcagtttgtctcagcccagc
gctgctccttcatcttcaaccacttcatctgcaccagacaccgagcggaggactctgaca
gtaggaatggccaacatggtgctctctttactgtcctctgcctggtttccgctggatctc
tcttcacatcaagatgcactcctgctttctggcaacctgcttgctgctgtggctcctaaa
tgcatgcgcaacccctgggctggagaggaggaaggcagcagtgggaacaccagtggaggc
ccaaacaagatggaggaaccctgggcggcgctgtcagaacgttccctggtggtcatggtg
gagcagctcttctcccacctgatgaaggtgctcaacatctgcgcccatgtgctggacgac
actccaccaggaccagctgttaaggctgctctcccttccctgagcaacaccccctccctc
agtcctatccgcaggaaaggcaaggagaaggagggtgttgagcccagcgtcgcccccatg
agcccaaagaaaagcaacgaggtcaacacaggcaggccagcggacggcacagggtcaaca
gccgtgaacaaatctaccacccttggcagcttctaccacctgcccccgtacctcaagctc
tacgacgtgctgaaggctacacacaccaactacaaggtgacgttggacctccacagcagc
caggagaagtttggaagtttcctgcggtccacgttagatgttctgtctcagctgctggag
ctcgccacacttcacgacatcggcaagtgtgtggaggaaattttgggctacctcaagtcc
tgcttctccagagaaccaaccatggctactgtttgtgtgcagcagttgttgaagaccctg
tttggtaccaacctggcctcccagtatgagggtgtcctgagtggaccgagtcgttcccag
ggcaaggctctccgtctgggctcctccagcctgcgacccggcctctaccactactgcttc
atggctccgtacacacacttcacccaggctctcgccgacgcaagtctgcgtaacatggta
caagctgaacatgagcaggacacctcgggatggtttgatgtgatgcaaaaagcctccaac
cagctgaggtccaacatcgcaaatgcaacacgtaacagaggagacaagaacgccatccac
aaccacatccgactctttgagccgctggtgatcaaagctctgaagcagtacaccaccagc
acctctgtggccctgcagagacaagtgctggacctgctcgcccagctggtgcagctcaga
gtcaactactgcctgctggactcggatcaggtgttcataggcttcgtcctaaagcagttt
gagtacattgaagtcgggcagttcagagattcggaggccatcattcccaacatctttttc
ttcctggtgctgctgtcttatgagcgctatcactccaagcagattatcagcatcccaaag
atcatccagctgtgtgacggcatcatggccagcggcagaaaggctgtcacacacgccatc
cctgccttgcagccaatagttcatgacctgtttgtcttgaggggctcaaacaaagccgat
gcaggcaaagagctggacacacagaaggaggtggtggtgtccatgctgctccgactcgtc
cagcaccatcaggtgttggagatgttcatccttgtgctgcagcagtgtcacaaagagaac
gaagacaagtggaagagattgtccagacagattgctgatgtcattcttcccatgatcgcc
aggcagcagatgcacctggactctccggaggctctgggagtgttgaacactctgtttgag
acggtggcgccctcctctctgcgacctgtagacatgctgctcaagagtatgttcaccatc
ccagccaccatggcgtctgtcgctacagtccagctgtgggtgtccggtatcctggcggtg
ctgcgggtcctcgtctcccagtccaccgaggatatcgtcctgtcgcgggtccacgagctg
tcactctccccacatctcctctcctgcctcaccatccgccgcctgcatcagccgagcccc
ttctccagcgacccgcccgctgctgacacgctcggcagccaggaagctaacggtgaagcg
caaaaggctccgcctgaggaaaccttcgccaggttcctcctccagctggtgggtgtgttg
ttggatgacatttccacccggcaggttaaagtggacatcactgagcagcaacacaccttc
tactgccagcagctcggcacgctgctcatgtgtttaatacacgtcttcaaaagtggaatg
tttcgcaggatcacagctgcagccagccgtctgctgaagggcgagaatggaggcggacag
acgggcactgagatcagcctcttctaccccttagagggtctgaacagcatggtgcagtgc
ctcatcaccacccacccgtccctggtgctcctctggtgccaggtcctcctcatcatcaac
tacaccaactactcctggtgggctgaggttcatcaaacacccaaaagacacagcctctcg
tgcacgaagctgctgagccctcaatccttgggggaaggcgaagaggagaagcccgagtcc
cggttagcgatggttaacagggagattgtacgcaggggtgcactcatcctcttctgtgac
tacgtgtgtcagaacctccacgactcagagcatctgacctggctgattgtcaaccacgtg
cgcgacctcatcagcctttcccatgaacctccggtgcaggacttcatcagcgccgtccac
cgcaactcggcggccagcggcctcttcatccaggccatccagtcccgctgtgacaacctc
actactccaaccatgttgaagaagactcttcagtgtttggaaggcatccacctcagtcag
tctggatccctgctgatgctttatgtggacaagctgctcagtacgcccttcagggttttg
gctcgcatggtggacacgctggcctgtcgcagggtcgagatgttgctggctgagacgctg
cagaacagtgtagcccagctgcctgtggaggaactggacaggatccaagaatacctccag
accagtggtttggctcagaggcaccagaggttctactctctgctggacaggttcagagcc
actgttgctgacaagagcagccccacccctcctgtgacatcacaccccttagatggggac
ccgccccctgcccccgagctggtcattgcagataaggagtggtatgtggctctggtgaag
tctcagtgctgccttcgtggagacgtttccctgttggagacgacagaacttcttaccaaa
ctacctcctgctgatctcttcaacaccatgagctgcaaggagttcaacctcagcctgttg
tgtccgtgcctcagtatgggggtgcagcggttagcacggggtcaagggtcacttttgttg
gagactgccttgcaggtgaccctggagcaactggcaggggtcaccgggtcacttcctgcc
cctcaccagtccttcctgccgccgccccaaccgcagccatactggcaccagctgggtgac
gtgtatgacgagcccagtttctaccccagagttctgtcgctgtgcagagcgctgtcccag
tacctgctcagtgtgagccagctaccttcttcactacatattccctctgacaaggagcac
ctcatcaccactttcacctgcactgccgctgaggttgtagtgtggcgcctgctgcaggac
cacctgcccctgagtgtggacctgcagtgggctctgtcctgcctgtgtctggccctgcag
cagccctgcgtctggaacaagctctccaccccagagtacagcacacacacctgctccctc
atatactgcctgcgcctcactatcgcagcagtggctgtgagtcctggtgaccagctgctg
catccagagaagaaaaaggcaaaaggagaccgagatgatgaaggagaccaggtggactca
gcgcatgccggccacatgatcgagtggcaagcgtgtgaaatcatggccgagctggtggaa
gggctgcagagcgtactttccctgggtcaccataggaactgtgtattccccgcttttctc
acaccgacactgcgcaacattgtgatcagtctgtcccgactgccgctggtcaacagctac
acccgagtacctccactggtttggaaactgggctggtcccctcagccgggaggagagttc
ggcacgacgctgccggagatccccgtggacttcctgcaggaaaaggacgtcttcagagag
tttctctaccggatcaacacactgggctggagcagcaggactcagtttgaggagacgtgg
gccactctgctgggggtgctggtcacccaacccatcaccatggaccaggaggaggagaca
cagcaggaggaggacttggagcggacccagttgaatgtgttagcggtgcaggccatcacc
agcctggtgctgagtgccatgaccctgcccaccgctggcaaccccgcagtcagctgtctg
gaacagcagccccgcaacaagagcctcaaagccctggaaactcggtttggaaggaaactt
gcagtgattaggggcgaagtggagagagagattcaggctcttgtgtcgaagagagataat
atccacacgcaccacccgtaccacgcctgggaccctgtgccctcgctgtcagcagcctcc
gcagggactctgatcagccatgagaaactgctgctgcagataaacacagagcgggagttg
ggcaacatggactacaaactggggcaggtctccatccattcagtgtggttgggtaacaac
atcactcctctaagggaggaagagtggggtgaggatgaagaggatgacgcagacactcca
gcacccacctcccctccactatctcccatcaactccaggaagcatcgtgcaggtgtggac
attcattcgtgttctcagtttctcctggagctctacagccagtggttgatccccggctcc
ccgagtaacaggaggaccccgaccatcctcatcagtgaggtggtccgatcgctgctggcg
gtgtcggacctgttcacggagaggaaccagttcgacatgatgttctccaccctgatggag
ctgcagaaactccatccaccagaggatgagatcctcaatcagtacctggtgcctgccatc
tgcaaggcagccgctgtgctgggcatggacaaagcgatagccgagccggtgtgtcgcctg
ttggagacgaccctgcgcagcacccacctgcccagccgcatgggggccctgcacggggtg
ctgtacgtgttggagtgcgacctgctggatgacacggccaaacagctgatccccaccgtc
tccgagtaccttctctccaacctgagggccatcgctcattgtgtaaacctgcataaccag
cagcatgtgttggtgatgtgcgcagtggccttctacatgatggagaactaccctctggat
gtaggagctgagttcatggctggagtcatacagctgtgcggtgtgatggtgtcggccagc
gaggactccaccccctccgtcatctatcactgcgtgcttcgcggtctggagcgcctcctg
ctgtcggagcagttgtcccgcgtggacggagaggcgctggtcaaactcagcgtggaccgg
gtcaacatgccgtcgccgcacagagccatggccgccctgggcctcatgctcacctgcatg
tacaccggcaaggagaaagccagccctgccggccgccccgcccactccgaccctcaggcc
cccgacagcgagtccatcattgttgccatggagagggtgtccgtgctctttgacaggatc
aggaagggtttacccagcgaggctcgagtggtttccaggattctgcctcagtttctggac
gacttctttccgccacaggacgtcatgaacaaggtcatcggagagttcctgtccaatcag
cagccttacccacaattcatggccaccgtcgtctacaaggttttccagaccctccacgcc
acgggccagtcgtcgatggtgcgcgattgggtgctgctgtctctgtccaacttcacccag
cggaccccggtggccatggccatgtggagcctctcctgcttcttcgtctcggcctccacc
tcccagtggatctccgctctacttccacacgtgatcagccggatgggctccagcgaggtg
gtggacgtcaacctgttctgcctggtggcgatggatttctaccggcaccagatcgacgag
gagctggaccgcagggctttccagtcggtctttgagacggtggcgtcgccgggcagcccg
tactaccagctgctgggctgcctgcagtccatccaccaggacacgtcactctga
DBGET
integrated database retrieval system
