Embiotoca jacksoni (black perch): 138208361
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Entry
138208361 CDS
T10523
Symbol
cacna1ba
Name
(RefSeq) LOW QUALITY PROTEIN: calcium channel, voltage-dependent, N type, alpha 1B subunit, a
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04010
MAPK signaling pathway
eja04020
Calcium signaling pathway
Brite
Ion channels [BR:
eja04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
138208361 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
MOLO1
Motif
Other DBs
NCBI-GeneID:
138208361
NCBI-ProteinID:
XP_069022297
LinkDB
All DBs
Position
Unknown
AA seq
2283 aa
AA seq
DB search
MILATIIANCIVLALEQHLPASDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKG
SYLRNGWNVMDFVVVLTGILATVGADFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAILMFAIIGLDFYMGKFHRTCFRTDTGEQVAEFPCGLEAPARTCGNG
TACTEFWIGPNFGITNFDNILFAVLTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVML
AEEDKNAEEKSLDGAWYKRKHTNSALVMSAVLKRTKKSKNDLINAEEGDDHFTDISSVAP
PGSPFARASIKNENSSYFRRKEKRIRFTIRRLVKSQSFYWTVLCLVGLNTLCVAIVHYDQ
PEWLTYALYLAEFVFLGLFLAEMSMKMYGLGPQNYFHSSFNCFDFGVIIGSIFEVIWAAI
KPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALL
GMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRGGMFSS
IYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAINKKLALQKAKEVKEVSP
MSAANISITAFLTRSRGNAHSSSSSICSVNSLSYVCTPVHQYLSKEQQKSLKAMSVWEQR
ANQLRRQNRASCDALYSELEPEERVHVSSALHIRPDMMTHLDRPLVVEPRDGPATGAGHQ
HHHHHHKPGMPEEAETAAEPPPPPPPPPSSAAPHQLRRHHRHRDRARTKEEANDNGDAGR
HHVHHSRSKDHDGSRGKEGKNERSRSREGGRKHRQRSVEDSGEGGGVPGEKEHRHHHSHR
QSRGGNGTVNSGGRGERRSRHKDGRSSNRDGDRNSNGANGERRRQLTHGSRGPSTVEGEE
ANEREKTHGHRFGDSEGESLAISPQQGSGGTSEPPDHAEDSDNERNDRRTGQSSVHIPPV
TITSPPGETTLIQMNMTEKTLEDLGQTGPRPILPYSSMFMFGQTNPVRRLCHYIVTLRYF
EMSILVVIAMSSIALAAEDPVWTNAPRNNVLRYLDYAFTGVFTFEMVIKMVDLGLLLHPG
SYFRDLWNILDFIVVSGALVAFAFSSQQGVTRGTKGKDISTIKSLRVLRVLRPLKTIKRL
PKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCKGQ
FLDYDKDEVAAMTREWRKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDKGPS
PGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAIN
AKPLTRYMPMNTQSFQYRMWKFVVSAPFEYSIMIMIAVNTVVLMMKFHGAPDFYEAMLKN
LNIVFTTLFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEINDRLLNLSFL
RLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLN
EDTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSRRACDERSGSQGKECGSDFAY
FYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIS
YKDMYNLLRVISPPLGLGKNCPNRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIK
LASGMVAQRLSDAELKKELSTVWPNLSQKTVDLLVTPHKHNELTVGKVYAALMIFDYYKQ
NQARKMQQQKAPGSQWHFGTVFEPLLPSMQDEDLPGMVDSVELPSMPQARPSSTSLTNGG
ALPAHDHAIKPSSSWLKDKHKDAPQATSGRMLSRGPSEDRPDAAVAQESVEMGKMETSVS
STIPVLGSGLENQGRAASMPRLNTELQRSHSRHSAGIHLATVPDNSPMSRSASSVASQRP
PEVNLRDYTLEKPISQERPHHHHHHHHHRCHHRRDRDRDKRQRSLDTPLGGQPASSAGAP
GEPASDPAAPRERGQERGRSHERKHHHSSAEKQRYYSCDRYCSREHCHTKSATASCAVSP
GDGPEAGTKQGSGWVKGGPVALSSSSSTPSRGRRQLPQTPLTPRPGVAYKTANSSPVHFV
SSRASLSRGLSEHDALGHAGSRHFPCPVTRICSEPFLGRARGEAPDGPYGSLRDRLDVFR
DARRRLPGPRAGRSPRIAPPRGTGLPAPQQNLGVPNGYHFSFGGGSGARAPRYYPEVEED
EWC
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggccaccatcatagccaactgcatcgtgctggctctggagcaacacctcccg
gcctccgacaaaacccccatgtcggagcgtttggacgacaccgagccctactttattgga
atattttgtttcgaggccggcatcaagatcatcgctctgggctttgcctttcacaaaggc
tcctacctgcgtaatggctggaatgtaatggactttgtggtggtcctaacagggattttg
gccaccgtcggcgccgacttcgacctgcgaacactgagggcggtgagagtcctgcggccg
ctcaaactggtctccggcatcccaagtcttcaggtggtgctgaagtccatcatgaaagcc
atggttcctctgctgcagatcggcctgctgctcttcttcgccatcctcatgttcgccatc
atcggcctcgacttctacatgggaaagttccaccgcacctgcttcaggacggacaccggc
gagcaggtggcagagttcccgtgcggcctggaggccccggcgaggacctgcggcaacggc
accgcctgcaccgagttctggatcggacccaacttcggcatcaccaacttcgacaacatc
ctgttcgccgtcctcaccgtcttccagtgcatcaccatggagggatgggtggacatcctg
tacaacgccaacgacgcctcagggaacacgtggaactggctgtacttcatccccctcatc
atcatcggctccttcttcatgctcaacctggtgctcggcgtgctgtcgggggagtttgcg
aaggagagagagcgtgtggagaagaggcaggagttcctgaagctccgcagacagcagcag
atagaaagagagctgacaggctacctggagtggatctgcaaagcagaggaggtgatgctg
gccgaggaagacaagaacgcggaggagaagtctctggacggcgcctggtacaagaggaag
cacaccaactccgccctcgtcatgtcggcggtgctgaagaggaccaagaagagtaagaat
gacctcatcaacgccgaggagggagatgaccacttcacggacatctcgtctgtcgccccc
ccggggtcgccgttcgcccgggccagcatcaagaacgagaactcgtcctacttccggagg
aaagagaagaggatccgcttcaccatccgccgcctggtgaagtctcagagcttctactgg
accgtgttgtgtctggtcggcctcaacacgctgtgcgtggccatcgtccactacgaccag
cccgagtggctcacctacgctctgtacctggctgagtttgtgttcctgggcctcttcctg
gctgagatgtccatgaagatgtacggcctcggaccccagaactacttccactcctccttc
aactgttttgacttcggggtgatcatcggcagcatcttcgaggtgatctgggccgccatc
aaacccggcgcctcgttcgggatcagcgtcctgcgagcgctgaggctgctcaggatcttc
aaagtcaccaagtactggaactctctgagaaacctggtggtctccctgctcaactccatg
aagtccatcatcagcctgctcttcctgctcttcctcttcatcgtggtcttcgctctgctg
ggcatgcagctgttcggtggccagtttaatttcgaagacgaaacgccgacgaccaacttc
gacacgttcccggcggccatcctcaccgtgttccagatcctcaccggggaggactggaac
gccgtcatgtaccacggcatcgagtcgcagggcggtgtgcggggggggatgttctcctcc
atctatttcatcgtcctcaccctcttcggaaactacacgctcctcaacgtgttcttggcc
atcgctgtcgataacctcgcgaacgcccaggagctcaccaaggatgaagaggagcaagag
gaggccatcaacaagaagctcgctctccagaaggccaaggaggtaaaggaggtcagcccc
atgtcggccgctaacatttccatcaccgcttttctaacacgcagtcgaggtaacgcgcac
tctagcagctcatccatctgcagcgttaactcactgagttatgtctgcactccagtccat
cagtacctgagtaaggagcagcagaagtcgctgaaggcgatgtcggtgtgggagcagaga
gccaaccagctgaggaggcagaaccgggccagctgcgatgcgctgtacagcgagctggag
ccggaggagcgtgtccacgtgtcctcggccctccacatccggcccgacatgatgacccac
ctggaccggccgctggtcgtcgagcctcgcgacggacccgcgacgggcgccggccaccag
caccatcaccaccaccacaagcccggcatgcccgaggaggccgagaccgccgccgaacct
cctcctcctcctccccctcctccttcctccgccgcccctcaccagctccggcgccaccac
cgccaccgggaccgggccagaaccaaagaggaggccaacgacaacggggacgccgggcgg
caccacgtccaccacagccgctccaaagaccacgacggcagccggggcaaagagggcaag
aacgagaggtcccgcagccgagagggaggcaggaagcaccggcagaggtcggtggaggac
agcggggaaggcgggggggtcccgggcgagaaggagcaccgccaccatcattcacaccgg
cagtcccgggggggtaacgggacggtgaacagcggcgggaggggcgagaggaggtcccgc
cacaaagacggacgctcgtccaacagggacggagacaggaactccaacggagccaacggg
gagaggaggagacagcttactcatgggtccagaggaccgtcgacggtggagggagaggag
gccaacgagagggagaagacccacggtcacaggttcggtgactcggagggggagtccttg
gccatctccccccagcagggctccgggggtaccagcgagcctccggaccacgccgaggac
tcggacaacgagaggaacgacagacggacaggccagtcctccgtccacatcccccccgtc
accatcacctccccacccggagagaccaccctcatacagatgaacatgaccgagaagacg
ctggaggacctcggtcagaccggacccagacccatcctgccctacagctccatgttcatg
tttggacagaccaatccggtgaggcgcttgtgtcactacatcgtcactctgcggtacttt
gagatgtccatcctggtcgtcatagcgatgagcagcatcgccctggcagctgaggacccc
gtctggaccaacgccccccgcaacaatgtgctcagatacctggactacgccttcaccggc
gttttcacttttgaaatggtgatcaagatggtggatctgggcctgctgctccatcctggt
tcctacttcagagacctgtggaacatcctggacttcatagtggtcagtggggcgctggtg
gcttttgcattttcatcgcagcaaggtgtgaccagggggaccaaaggcaaagacatcagc
accatcaagtctctgagggtcctccgagttctccggccgctgaagaccatcaaacgtctg
ccgaagctcaaggcggtgttcgactgcgtggtcaactctctgaagaacgtgctgaacatc
ctcatcgtctacatcctcttcatgttcatcttcgccgtcatcgccgtgcagctcttcaag
gggaagttcttctactgcaccgacgagtccaagggcctcgagaaggactgcaaaggacag
ttcctggactacgacaaggacgaggtggccgcgatgacccgcgagtggaggaagtacgag
ttccactacgacaacgtgctgtgggccttcctgacgctcttcaccgtctccaccggggag
ggatggcccaccgttttgaagcactccgttgacgccacctttgaggacaagggtcccagc
ccgggctaccggatagaaatgtccatcttctacgtggtctacttcgtggtcttcccgttc
ttcttcgtcaacatcttcgtcgccctgatcatcatcaccttccaggagcagggagacaag
gccctgtccgagtgcagcctggagaagaacgagagagcctgtatcgacttcgccatcaac
gccaaacctctgacgcgctacatgcccatgaacacgcagtccttccagtacaggatgtgg
aagttcgtggtgtcggctccgttcgagtactccatcatgatcatgatcgccgtcaacacc
gtggtgctcatgatgaagttccacggagctccggacttctacgaagcgatgctgaagaac
ctcaacatcgtcttcaccaccctcttctctctggagtgcatcctcaagatcatcgccttc
ggcccgctgaactacctgaaggacgcctggaacgtcttcgactttgtgaccgtgttggga
agcatcaccgacatcctggtgaccgaaatcaatgaccgcctgctgaacctcagcttcctg
cggctcttcagggcggcgcgcctcatcaagctgctgcggcagggctacaccatccgcatc
ctgctctggaccttcgtgcagtccttcaaggctctgccgtacgtttgcctgctgatcgcc
atgctcttcttcatctacgccatcatcgggatgcaggtgttcggcaacattgacctgaac
gaggacacggcgatcaatcaccacaacaacttccggacgttcctgcaggctctcatgctg
ctgttcaggagcgccaccggggaggcgtggcacgagatcatgttgtcgtgtttgagccgc
cgagcctgcgacgagcggtcggggtctcaggggaaggagtgcggcagcgacttcgcctac
ttctactttgtctccttcatcttcctctgctccttcctgatgttgaacctgttcgtggcc
gtcatcatggacaacttcgagtacctgacccgggactcctccatcctggggcctcatcac
ctcgatgagttcatccgggtttgggccgagtacgacccagccgcctgcggacggatttcc
tataaggatatgtacaatttgttacgtgttatctcgccccccctcggcttagggaagaac
tgcccgaatagggtagcatacaagcgcctcgtcaagatgaacatgcccatcgccgacgac
aacacggtacacttcacctccaccctgatggcgctgatccgcacggcgctggagatcaag
ctggcctcaggaatggttgcccagcgactgtctgatgctgagttgaagaaggagttgtcc
acggtgtggcccaacctgtctcagaagaccgtggacctgctggtgacgcctcacaaacac
aacgagctgacggtggggaaggtctacgctgccctgatgatcttcgactactacaagcag
aaccaagcgaggaagatgcagcagcagaaagcaccgggctcccagtggcatttcgggact
gtgtttgagccattgctgccttccatgcaggatgaagacctgcccgggatggtcgacagc
gtggagcttcccagcatgccgcaggcccgacccagctccacctccctcaccaacggaggc
gcgctgccggctcacgatcacgccatcaagccgtcgtcctcctggttgaaggacaaacac
aaagacgctccgcaggccacgagcgggaggatgttgtcccggggcccgtcggaggaccgg
ccggacgccgccgtcgctcaggagtcggtggagatggggaagatggagaccagcgtcagc
agtacgatcccggtccttggatcgggtctggagaaccagggccgagcagcttcgatgcct
cgactcaacacagagctgcagcggagccactcccgtcactctgctgggatccatctggcc
accgtccccgacaacagccccatgtcgcgctcggcctccagcgtggcctcacagcggccc
ccggaggtcaacctgagggactacaccctggagaagcccatcagccaggagcgaccccac
caccaccaccaccaccaccaccaccgctgccaccaccgccgggaccgggaccgggacaag
aggcagcggtctctggacacgcccctcggcggtcagcccgcctcctccgcaggtgcacca
ggagagccagcgtcggacccggccgcccccagagagcgaggccaggagcgcggccgctcc
cacgagaggaagcatcatcactcctcggcggagaagcagcgctactactcctgcgaccgc
tactgcagccgggaacactgccacaccaagtcggccaccgccagctgcgccgtctccccc
ggcgacgggccggaggccggcaccaagcagggcagtggttgggttaaaggcggcccggtg
gcgctgagctccagttctagcacgccgagccgcggacgtcggcagctcccccagaccccc
ctcaccccgcggcccggggtggcctacaagactgccaactcctcccccgtgcactttgtg
tccagccgggcctctctgagccgcggcctgtcggagcacgacgccctcggccacgccggc
tcccgtcacttcccctgccccgtcacccgcatctgctccgagcccttcctgggccgggcc
cgcggcgaggccccggacggcccgtacggcagcctccgggaccggctggacgtcttccgg
gacgcgcggcgccgtctcccgggcccccgcgccggacgctcacctcggatcgcgccgcct
cgcgggacgggacttcccgctccgcagcagaacctcggcgtgcccaacgggtaccacttc
agcttcgggggcggctccggcgccagggcacccaggtattacccggaggtggaggaggac
gaatggtgctag
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integrated database retrieval system
