Embiotoca jacksoni (black perch): 138208850
Help
Entry
138208850 CDS
T10523
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138208850
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138208850
Chromatin remodeling factors
BAF complex
138208850
PBAF complex
138208850
GBAF(ncBAF) complex
138208850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138208850
NCBI-ProteinID:
XP_069023131
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MSGGGGRSSHVGETNQRLKADYKEGACCSSRSKRTRAMSAPDPPMGGTPRPGPSPGPGPS
PGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPSGYGPDNMHPLHKPMEALHEKSLS
EESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHSPLGGSDHSSPVPSNGPPSGPLMP
SSASSSSSGGPGSVSTPLDGPSGDQHTLGPNNRPGPPGSSGPGPSPGPNLGPGVPSLVSG
LETTGPAGPVGPGGPSGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMP
GMQQQQPMPSLAPGTGGGPGGGPGGPGPGPGPMGSAYSRAHGMMGPNMPPPGPSGTPAGM
QGQNPNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQS
PGQPAQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRLQARITHRIAELENLPGSL
AGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALDAKAYKRSKRQSLREARI
TEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSITGKILKLTKAVATYHANTE
REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHK
AAQALKEKKKKKKKKKKLEIAEGQTPALGPDGEPLDETSQMSDLPVKVIHVDSGNILTGV
DAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEVGCFEEEEELHPSAAPVEEKKKIA
DPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYSVAHAVTERVEKQSSLLING
QLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMELKRLNGPYLIIVPL
STLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKQVLAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKV
EYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMF
QQIEESFSEHLGFSGGIVQGADLYRASGKFEVLDRILPKLNVTNHKVLLFCQMTSLMTIM
EDYFAYRSFKYLRLDGTTKAEDRGMLLKTFNEPGSDYFIFLLSTRAGGLGLNLQSADTVV
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEQDEVWGQDVCLRINEEDEVPDDETVNQMIARSEEEFD
QFMRMDLDRRREDARNPRRKPRLMEEDELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQR
KEVDYSDSLTEKQWLKAIEEGTLEEMEEEVRHKKTTRKRKRDRDLDLPGPSSSLGSRGRG
DKDDDGKRQRKRGRPPAEKLSPNPPALTKKMKKIVDAVIKYKDSASGRQLSEVFIQLPSR
KELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLFQNAQTFNLEGSLIYEDSI
VLQSVFTSLRQKIEKEEESEGEDSDEEEEELEEGSESESRSVKVKIRLGRKDKGGDRGKG
RSRRTGRTRAKPVVSDDDSEDEQEEERSPSATDEEA
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtggaggggggcgctcgagccacgtcggtgaaacaaatcaacgcttgaaggca
gattacaaagagggtgcctgctgctcatccaggagcaagagaaccagggctatgtcagcg
ccagatcctcccatgggaggcacccctcgtccaggtccctcccctggtccgggtccttcc
cctggtgcaatgttgggtcccagccccgggccctccccaggctcctctcacagtatgatg
ggccccagccctggtcctccctcctctggacactctcagccagggccctctggatacggc
ccggacaacatgcaccctctgcacaaacccatggaggccttgcacgaaaagagcttgagt
gaggagagtcgcttcagtcagatgaagggactgtctatgagacagggcgggcacagtggc
atgggtcccccacccagtcctctggaccaacactcacaaggctaccactctccattaggc
ggctctgaccactccagccctgtcccttcaaatggtcccccctctgggcctctcatgcca
tcatctgcctcctcatcgtcctctggtggccctggctctgtctctacacctttagacggc
cccagtggagatcaacacactttgggtccgaataaccggcccggccctccaggaagttct
ggaccaggtcctagccctggacccaatcttggtcctggtgtccccagccttgtttctggc
cttgaaactactggccccgctggaccagtaggtcctggtggccctagcgggccaactccc
ttcaaccagaaccagcttcaccaactcagagcccagatcatggcttataagatgctggcc
cgggggcagcccctgccagatcacctccagatggctgtccagggaaagaggccgatgccg
gggatgcaacagcagcagcccatgccgagcctggctcctggaactggaggagggccagga
ggtggtccaggaggaccaggtccaggacctgggccaatgggctcagcatacagccgagct
catggaatgatgggtccaaacatgcctcctccaggcccttcagggactccagctgggatg
cagggacaaaaccccaatggacccccaaagtcctggcctgaaggccccatggtgaatgca
gcagccccctccaacgcaccccaaaaactgatcccccctcagcccactggccggccctct
cctgctcccccttcagttcccccagccgcctccccagtcatgcccccacagacgcagtcc
cccggccagccagcgcagcctactccaatgatgccttaccacgccaagcagaaccgcatc
acccccatccagaaaccctgtggcctggatccggtggagatactgcaggagagggagtac
aggttacaggctcgtataacccatcgcatcgctgaacttgagaacctgccgggttctctg
gctggtgatttacgtaccaaagctactatcgagctcaaagccctccgactgcttaacttc
cagagacagctgcgtcaagaggtggtcgtgtgtatgcgacgcgacacagctctggagacc
gcccttgatgccaaggcctacaaacgaagcaagcgtcagtctctgcgagaggcccgcatc
acagagaaactggagaaacagcagaagattgagcaagagcgcaaacgcagacaaaaacat
caggagtacctcaacagcatcctccagcatgccaaagacttcaaggagtaccaccggtca
atcacaggcaaaattctgaaactgaccaaagctgtggccacttaccatgccaacaccgaa
cgggagcagaagaaggagaatgagcgtattgagaaggagaggatgaggaggcttatggct
gaggatgaggagggttaccgtaaactgattgaccaaaagaaggacaagcgcctggcctac
ctgctgcagcaaactgatgagtacgttgccaacctcacagagctggtcagagctcacaaa
gctgcacaggccctcaaggagaagaaaaagaagaagaagaaaaagaagaagttggagatt
gcagagggtcagactcctgccttggggcctgatggagagcctctggatgagacgagtcag
atgagtgacctgcccgtgaaggtcatccatgtggacagtgggaacatcctgacaggggtg
gatgctcccaaagctggacagctggagacctggctggagatgaacccaggttatgaggtg
gctccccgttcggacagtgaggacagcgaggaggaggaagaggaggaggttggttgtttt
gaagaagaagaggagcttcatccttcagcggctccggtcgaggaaaagaagaagatcgca
gatcctgacagcgaagatgtatcagaggtggacgtccggcacatcattgagaacgctaaa
caggatgtggatgacgagtatagcggtgcagcgtttgctcgaggactccagtcatattac
tctgtggctcacgccgtcacagagagggtggagaaacagtccagtttgttgataaatgga
cagctcaaacagtatcagattaaaggtctggagtggctggtttccctttacaacaacaac
ctaaatgggatcctggctgatgagatgggtctgggaaaaaccatccagactatcgccctc
atcacatacctcatggagctcaaacggctcaacggaccctacctcatcattgtgcccctc
tcaactctttctaattgggtgtatgagtttgacaagtgggcaccaactgttgtgaaagtg
tcctacaagggatctcctgctgccagaagagcctttgtgccccaactgcgtagtggcaag
tttaacgttttactcaccacttatgagtacatcatcaaggacaaacaagtactggccaag
atccgctggaagtacatgattgtggacgaaggtcaccgtatgaaaaaccaccactgtaaa
ctgacccaggtcctgaacacccactaccttgctccgcgacgtgtcctgctgacagggacg
ccgctgcagaacaaactgcctgagctgtgggcgctgctcaatttcctcctgcctacaatc
tttaagagctgcagcaccttcgagcagtggtttaatgcccctttcgctatgactggagag
aaggtggacctgaatgaggaggagactatcttgatcattcgtcgtcttcacaaagtgcta
cggcccttcctgttacgaagactaaagaaggaagtggaggcgcagcttccagagaaagtg
gaatacgtgatcaagtgtgacatgtcgtctcttcagagggtgctgtacaggcacatgcag
gccaagggcgtcctgctcactgacggatcagagaaagacaagaagggtaaagggggcaca
aagacactgatgaacaccatcatgcagctgcggaagatctgtaaccacccgtatatgttc
cagcaaatagaggaatccttctctgaacatttaggattctctggtgggatagtccagggt
gctgacctgtatcgggcctcaggaaagtttgaggtgttggatcgaatcctgccgaagctg
aatgtcacaaaccacaaagtgctgctcttctgtcagatgacatcgctcatgaccatcatg
gaagactactttgcctaccgcagcttcaagtatctgcgactggatggcacgacgaaggct
gaagacagagggatgttactgaagacattcaatgaaccaggatcagattactttatattt
ctgctgagcaccagagctggaggccttggcctcaacctgcagtctgctgacacagtggtt
atttttgactctgactggaacccacaccaggacctgcaggctcaggacagagcccaccgt
ataggtcagcagaacgaggtgcgagtgctgcgtctctgtacagtcaacagcgtggaggag
aaaatcctggcagcagccaaatacaaactgaacgtagatcagaaggtcattcaggccggc
atgtttgaccaaaagtcttccagccacgagcgcagggctttcttacaggccatcttggag
cacgaggaacaagatgaggtctgggggcaagacgtctgtctacgcattaatgaggaggat
gaagtgccagatgatgagacagtcaaccagatgattgccaggagtgaagaagagtttgac
cagtttatgcgtatggacctggaccggcgacgtgaggatgcacgtaacccgcggcgaaaa
cctcgtctgatggaagaggacgagctgcccacttggatcatgaaggacgatgcagaggtc
gagcggctgacctgtgaggaagaagaggagaaaatgtttggacgaggttctcggcagcga
aaggaggtggactacagcgattccctgaccgagaagcagtggctcaaggcgatagaggag
ggcacactggaggagatggaggaagaggtgcgccacaaaaagacgacccgcaagaggaag
agggaccgggacctggatctccctggtccctcctcttccttagggagccgtggacgaggg
gacaaagatgacgatgggaagagacagaggaagcggggacgaccacctgctgagaaactc
tccccaaatcctcccgctctcacgaagaagatgaagaaaattgtggacgctgtcatcaag
tacaaagacagtgccagtgggcgtcagctgagtgaggtgttcatccagcttccatctcga
aaagagctgccagagtactatgaactgatccggaagccggtggacttcaggaaaatcaaa
gagaggattcgaagtcatcgctaccgcagtcttggtgacctggagagagacgtcatgctg
ctcttccaaaacgctcagaccttcaacctggagggatctctgatttatgaggactctatt
gtgctccagtcggtgttcaccagcttgaggcagaagatcgaaaaggaggaggagagtgaa
ggagaggacagcgatgaagaagaggaggagctggaggagggatcagagtcagaatctcgc
tcagtgaaagtgaaaatccgtctaggcaggaaggacaaaggtggcgatcgggggaaggga
cgcagcagacgaacaggacgcaccagagccaaacctgtcgtcagtgacgacgactctgag
gatgagcaggaagaggagcgttcccccagcgccactgatgaggaggcctga
DBGET
integrated database retrieval system
