Embiotoca jacksoni (black perch): 138209086
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Entry
138209086 CDS
T10523
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138209086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eja03041
]
138209086
03009 Ribosome biogenesis [BR:
eja03009
]
138209086
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138209086
Spliceosome [BR:
eja03041
]
Complex A
U2 snRNP components
U2 related factors
138209086
Complex B
138209086
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
138209086
Ribosome biogenesis [BR:
eja03009
]
Eukaryotic type
90S particles
Helicases
138209086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_25
Cas3-like_C_2
SRP54
Flavi_DEAD
AAA_29
nSTAND3
Atrophin-1
nSTAND_NTPase5
DUF3915
Motif
Other DBs
NCBI-GeneID:
138209086
NCBI-ProteinID:
XP_069023547
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSEGRDKDRDREDRSRDRDRDRDRDRDRDRDREPKPTIAPSN
SMAAVASLPPLKQMAMHQQLNPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDIITRHQS
FVLVGETGSGKTTQIPQWCVDMVRGLPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQ
EVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGV
LKEVVRQRADLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAA
IRTVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQ
QQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVES
LLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLK
KLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMV
IASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHAFK
QNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALCT
GFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKP
EWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLESKEYSQY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagacatcgtctggatttgggcgacgactactcctctagtaagaagaggtct
gaagggagagacaaggaccgagaccgcgaggaccgctctagggacagggaccgagatcgg
gaccgggacagagacagagaccgggacagagaaccaaagccgactattgccccctctaac
agcatggcagccgtggcaagcttaccaccactcaagcagatggccatgcaccagcagctc
aatccattcaccaacctgccgcacacaccgcgctactatgagatcctgaaaaagaggtta
cagctcccagtgtgggagtacaaggaacgcttcacagatatcattacgcgtcatcaaagc
tttgttcttgtcggagagacgggctctgggaagacaacacagatcccacagtggtgtgtg
gacatggtgaggggtttgcctggaccaaagcgagcggtagcttgtactcagcccaggaga
gtggcagctatgagcgtggctcagagggtggcagatgaaatggatgttatgcttggacag
gaagttggctactccatccgatttgaggactgtagctctgccaagactatactgaagtac
atgacagatggtatgttactaagagaagctatgaatgacccgctgctggagcgatatggt
gtgatcattctggatgaggcgcacgagcgaactctggccacggatatcctgatgggagta
ttgaaggaagtggttcgtcaaagagctgatctgaaggtgattgtcatgagtgccacacta
gatgccgggaagttccaagtgtacttcgacaactgtcctttgctaacaattcccgggcgt
acccatcctgtagagatcttttacacccccgagccagagcgggactacctggaagcagcc
atccgcacggtcatacagattcacatgtgtgaggaagatgagggtgactgccttctcttc
ctcactggtcaagaggaaatcgatgaggcctgtaagcggattaagcgtgaggttgacgac
cttggacctgaagtcggagacatcaaaatcattccactgtattccacgttgccgccacag
cagcagcaaaggatctttgagcctcctcctccaaggaagcccaacggtgcaataggaaga
aaggtcgtcgtatcaacaaacattgctgagacttctctaacaattgacggtgtggtgttt
gtcattgatcctggatttgccaaacaaaaggtgtacaatcctcgaatcagagttgagtct
ctgctcgtcacagccatcagtaaagcttctgcccagcagagggcaggacgagctggaaga
acacgtccagggaaatgtttccgcctttacactgagaaggcctacaaaacagagatgcag
gataacacataccctgagattcttcggtccaacctagggtctgttgtgctccagctgaaa
aagctgggtattgatgaccttgtacactttgacttcatggatcccccagcacccgagaca
ttaatgagggccctggagctgctgaattacctggcagcacttaatgatgacggtgacctg
acggagctgggctccatgatggcagaatttcctttggacccccagttggcgaagatggtc
attgcgagctgcgagtttaactgctccaatgagatcctttccattactgccatgctgtca
gtcccacagtgttttgtccgtcccacggaggctaagaaggcagcagacgagtccaagatg
aggtttgctcacattgatggagaccacttgacgctgctcaacgtctaccacgccttcaaa
caaaaccatgagtctaaccagtggtgctatgacaactttgtcaactaccgttcactgatg
tctgctgacaatgtgcggcagcagctgtccaggatcatggaccgcttcaacctgcctcgt
cggagcacagagttcaccagcagagattactatatcaacatccggcgagcgctctgcacc
ggcttcttcatgcaggtggctcatctggagcgcacaggccattacctcacagttaaagac
aaccaagtggtccaactgcacccatccacagtcctggaccacaaacccgagtgggtcctc
tacaatgaatttgtcctcaccaccaagaactacatccgcacttgcacagacatcaagcca
gagtggctggtgaagattgcaccccagtactatgaaatgagtaacttcccacaatgtgaa
gctaaaagacagctggagcgaattattgccaaactagagagcaaagagtattcccagtac
tga
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