Embiotoca jacksoni (black perch): 138209687
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Entry
138209687 CDS
T10523
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
eja Embiotoca jacksoni (black perch)
Brite
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
138209687 (helz)
3'-5' decay
Other 3'-5' decay factors
138209687 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138209687
NCBI-ProteinID:
XP_069024542
LinkDB
All DBs
Position
Unknown
AA seq
2142 aa
AA seq
DB search
MADRRAEKSCEEASRSLARREYEAAVSHSTDALVVLAPPSSSAPVPPSPPSLVAAAGPLR
SRALLYRIAAFLQLKNYDEADEDCKHVLAEEIARGDGSLQASLRSMLLDGSLQEVANILS
KALYGEPMNGIVAKDLTRLKMLFSEIEAVNREMAPEYTDEPDEEVQDGWQFRPPPRGVTS
SEEYTLCKRYLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENYME
TLIEKWMNSLSPEKVLSDSLEGVNVETSSRLSVTVTSKRSSHSWIFSLLCKPARKLYRIA
LLYDAHRPHFFITGVSAEERLQVVPKSCQEWTPGEETPVTVDNGLDHCVYKVAVGFSTEI
FGTFRQTIVFDFGSEPVLMQRIMVDAASIEDLEHLLAARQQLLMTAKRWDSSCKTIVEFC
PNETMAEMERGLLSRYHIPLSADQLFTQSVLDKTLTKDNYQARLHDLLYIEEIAQYKEVS
KFNIKVNLQLVNSFMLTGISVGAKYAQNGQLFARFRLTETLSEDTLAGRLVMTKVNSVLL
LPLGREGVSSQPPPGVKERVYEAVIEEKTKDYIFLRICKDCCQELGLQSDRELQVELQFQ
LNRLPLCEMHYALDRIRENNILFPDASLVPTIPWSPNSTSADPLGVTDPLLKTSGLKQHI
SVLRQWDEQLDPRLNAKQKEAILAITTPITMSLPPILIIGPYGTGKTFTLAQAVKHILRQ
EQSRVLICTHSNSAADLYIKDYLHPYVEAGNPHARPLRVYFRNRWVKTVHPVVQQYCLIS
STHITFQMPTREDILRHRVVVVTLSTSQYLCQLDLEPGLFSHILLDEAAQAMECETIMPF
ALASKTTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYPPEFPCRILLCENYRS
HEAIINYTSELFYDGKLMASGKQPSHKDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIV
ERVEELRKKWPVAWGKLDDGSIGVVSPYADQVFRIRAELRKKRMHEVSVERVLNVQGKQF
RVLFLSTVRTRHTCKHKQTAIKRKEQLIEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVV
GDPIALCSVGRCRKFWEHFISICHENSSLHGITFEQIKAQLEALELKKTYVLNPLAPEFI
PRALRPMQGHHSSSQALHPHHHPHPQHAQPAPNKQGPQQQQQQQQQQQQQQQQQSPPKGK
HTNHTEHLPPEGYVQPNPAVLMGNPIRAFTPPLGGTPAGMGKSPSPVQRIDPHTGASILY
VPAVYGGNMVMSMPLPLPWPGYQNRFAVDPRIMSHPAAMAYNFNLLQAQNRGSPIPYSGV
AHPSPLGMGQPSPDKELQADPIRNGKLEGCPKSEQNRLQTPERKNTDMKEKQANLDTGQS
RSLDSQTEGLVGFPNTLLHRKDPSAAQRPLNYHLAPPNPAFPPHPAAGRTFPQQYPVSRL
PYRVGQPQHPGMAQQSQQLSPAYTGGSHNASFFSGPIPAHRSVQSPTLDGPEAGGVEEMS
GTIRTPMGHPAGHHPGLSQHNRVSSFGEDGQDGNLGDGLDLQGPLALEALSQQQQAARLG
QWGEAAGPFLQGGVAFPLPQQLAHLAQPGVARFPHQLLRAASWGLGANMDDESVPPASSG
PAFTRYPGLLREMVPQEQPDPREAAEMQPPPQSRLLQYRQSQSRASGDPSSSLAAISNHA
GPFPSGLYSHDAGRELLNDNLLNNQALQQQQQQQQQHPGNPLYNTGSYPHQPPAHPASPP
PSQVKYLLQEAQWSHGGTASVSPPQQNHLLGNQGHGLPYGLPIMAHPSRQEQVHLMQLHH
QHQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHQQNQGPDQESYHPL
SPRTSAATALHNVDEYEPRGPGRPLYQRRISSTYPDESSPASTHNALSQQSQQSQPCTSD
SQDHPHPHIQHHQHPHAPYGYPPHDHLWPSNGGGPAPFQNIPCNGAGTLVQHRELLASKG
LRQTEEQVKSEVTAAQQTHPHSLNSLQHQFPPLMPKNKQQQQQQPPPPPQQPPPLQQQPP
PQQQQQQQQQQQQQPPPQQQQQQQQQPPPPPPPPQAPTEPSQGAPNLSKPPTMSYASALR
APPKPRAVRPEQVKKNSDPLSLLQELSIGSSNGSNGYYSYFK
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggagagcggagaagtcatgtgaagaagccagcagatcgttagccaggcgg
gagtacgaggcggcagtcagccacagcacggacgccctggtggtccttgcacccccatca
tccagtgcccctgtcccaccgagccccccatccctcgtggccgccgccggacccctccgc
agccgtgccctgctctaccgaattgctgccttcttgcagctgaaaaactatgatgaagca
gatgaagactgcaaacatgtcctggcagaagaaattgccaggggagatggatcacttcag
gccagcttgcgttccatgttgttggatggcagcctgcaggaggtggccaacatcctatct
aaagccttgtatggagagccaatgaatggcattgttgcaaaagacctcaccagattaaaa
atgctcttctcagaaatagaggctgttaatagggagatggcaccagaatacacagatgag
ccggatgaagaggtccaagatggctggcagttccggcctcctcccagaggagtcaccagc
agtgaggagtacaccctctgtaaaaggtacctggagcagggtctgtgtcggtacggggcc
cagtgcacgtcggcgcactcgcaggaggagctgatggagtggcagaagcgctacgcgtca
cgcctcatccgcctcaaacagcagcaggagagcaagcacttcaccgagaactacatggag
accctaatagagaagtggatgaattccctctccccagagaaagtgctaagtgacagttta
gaaggagtgaatgtagagaccagctccaggctctccgttaccgtcacctccaaaagatcc
tcccactcctggatcttctccttgttgtgcaagccggccagaaagctgtaccgcatcgcc
ctgctgtacgatgcccacagaccacacttcttcatcacaggcgtgtcagctgaggagcgc
ctccaagtagtccccaagagctgccaggagtggaccccaggagaggaaactccagtgaca
gtagacaatggcctggaccattgtgtctacaaggtcgcagtgggcttcagcacagagatc
tttggtaccttcagacagaccattgtctttgacttcggctcagaacctgtgctgatgcag
cggatcatggtggacgctgcctctattgaagaccttgaacacctgctggcagccaggcag
cagctcttgatgacagcgaagcgctgggactcttcgtgcaagaccatcgtagaattctgt
cccaatgagacgatggccgaaatggagcgcggtctcctatcccgctatcacatccctctg
tcggccgaccagctcttcacccagtcagtcctggataagaccctgaccaaagacaactac
caggcccgactgcatgacctgctctacatagaggagattgcacaatataaggaagttagc
aagtttaacatcaaggtgaatctgcagctggtcaatagctttatgctgactggcatttct
gttggagccaagtatgcccagaatggacagctctttgcacgcttcagactcactgaaaca
ctctctgaggacacactggccgggcggcttgtgatgacaaaagtaaattcagtcctgctg
ctgccgctgggccgtgagggggtcagcagccagccgcctcctggggtcaaagagcgtgtt
tatgaggctgtgattgaggagaaaaccaaggactacatcttcctgaggatctgcaaggac
tgctgtcaggagttggggctacagtctgacagagaattacaggtggagctccagttccag
ttgaacagactgccactctgcgagatgcactacgccctggatcgcatcagagaaaacaac
atccttttccctgatgctagcctggtccccaccatcccctggagccccaacagtacctcc
gcggaccccctaggggtcacggaccccctgttgaagacctctggtttaaagcaacacatc
tcggttttgaggcagtgggacgagcagctggatccccgtctaaatgccaagcagaaggag
gccatcctggccatcaccacacccatcacaatgtccttacccccaatcctcatcattggt
ccctatggtaccggcaagaccttcaccctggcccaggctgtcaagcacatccttcgccag
gaacagagcagggtcctgatctgcacccactccaacagtgcggctgacctttacattaag
gactaccttcatccatatgttgaagcaggcaatcctcatgccagacctctcagggtatac
ttcaggaaccgctgggtgaagacggtccacccagtggtccagcagtactgtctgatctcc
agcacacacatcacttttcagatgcccacaagggaggacatcctcaggcaccgcgtggtg
gtggtcaccctcagcacctcccagtacctctgccagcttgacttggagcctgggttgttc
agtcatatcctgctggatgaagcagcccaggccatggagtgtgaaaccatcatgcctttt
gctctagctagcaagaccacccgcatcgtgctggctggagaccacatgcagctcagtcca
tttgtgtacagcgagtttgcacgggagcgtaacctgcacgtgtcgcttctggaccgactg
tatgagcattacccccctgagttcccctgtcgcatcctgctgtgcgagaactaccgctcc
cacgaagctatcatcaactacacgtcagaattgttttatgatggaaagctcatggcaagt
gggaagcagccctcccataaggacttctaccctctgaccttcttcacagccagaggagaa
gatgtccaggagaagaatagcactgcctactacaacaatgctgaggtgtttgagattgtg
gaacgggtggaggagttgcgcaagaagtggccggtggcctggggtaaactggatgacggg
agcatcggggtggtgtcaccgtacgccgaccaggtgttccgcattcgtgctgagctccga
aagaagaggatgcatgaggtcagcgtggagagagtgctcaatgtccaaggtaaacagttc
cgggtgctgttcctcagcacggtgcgcacacgacacacctgcaagcacaagcagacggcc
atcaagcgtaaagagcagctgattgaggactcgacggaagacctcgactacggcttccta
tccaactacaagctgctcaacacggccatcaccagagctcagtccctggttgcagttgtg
ggagaccccatagcactgtgctctgtagggcggtgcagaaaattctgggagcactttatt
tccatctgccacgaaaactcgagcctacatgggatcacctttgagcagatcaaggctcag
ctggaggcactagagctgaagaaaacctacgtcctcaacccactggccccggagttcatc
ccacgagccctcaggcccatgcaaggacaccactcgtcttcgcaggccctccatccgcac
catcacccacatcctcagcatgcacagcctgcccccaacaagcagggtccacagcagcaa
caacaacaacaacagcagcagcagcagcagcagcagcagcagtcaccccctaagggaaaa
cataccaaccacacagagcaccttccacctgaaggatatgtccaacccaacccagctgtg
ttgatgggaaaccctattcgggcattcacaccacctttgggtggtacaccagctggtatg
ggcaagtcgcccagtcctgtgcagaggatcgatcctcatacaggtgccagtatcctctac
gttccagctgtgtatggtggaaacatggtcatgtccatgcccctgcctctgccttggcca
ggttaccagaatcgctttgccgtggatcctcgcatcatgagtcacccagcagccatggcc
tacaacttcaacctgttgcaggcacagaatcgaggctcccccattccttacagtggagtg
gcacacccctcccctctgggaatgggccagcccagtcctgacaaggagctgcaggctgat
cccatcagaaatggtaaattagaaggatgtccaaagtcagagcagaaccgtctccagacc
ccagaaagaaaaaacacagacatgaaggaaaaacaggcaaatttagacacaggccaaagt
cgaagtctggattcacagaccgaagggctggttggatttcccaacacgctgctccatcga
aaagacccctcagctgcccaaagacccctcaactaccacctggcaccacccaacccagct
tttcctccgcatcccgccgctggaagaaccttcccccaacagtatccagtctctcggctc
ccttatcgggtcggccagcctcaacacccagggatggcccaacagagtcagcagctcagt
cctgcctacacgggtggaagccacaacgcttccttcttcagtggccccattcccgctcac
agatctgtccagtcgcctactttggatgggccggaggctggaggggtggaggagatgagt
ggcaccattaggactccaatgggccacccagcaggccaccacccaggcctgtcacagcat
aacagggtcagcagctttggggaggacggacaagatggaaacctgggagatggtttggac
ctccagggtcccttggctctagaggccctgagccagcagcagcaggcagcgaggttaggc
cagtggggggaggcagcaggccctttcctccagggcggcgtcgcctttcctctgccccaa
cagctcgcccacctcgctcagcccggcgtggctcgcttcccccatcagctgctccgggca
gctagctggggcctcggtgccaatatggatgatgaaagtgttcctcctgcctcttctgga
ccagccttcaccaggtacccaggcctcttgagagagatggtcccacaggagcagcctgat
cccagggaagcagctgagatgcagcccccacctcagtctcgtctcctccagtaccgccag
tcccagtcccgtgcctcaggtgacccttcatcctctttagccgccatctccaatcatgcc
ggcccttttccatcaggactctactcccacgacgcaggtcgcgagctccttaacgacaac
cttctcaacaaccaagccctgcagcagcagcagcagcagcagcagcagcacccggggaac
cccctgtacaacactggtagctacccacatcagccaccagctcaccctgccagccctcct
ccctcccaggtcaaataccttctgcaagaggcccagtggtcccacggtggaactgcatct
gtgagcccaccacagcagaaccacctgttagggaaccagggccacgggcttccttatgga
ctgcccatcatggctcatcccagcaggcaggagcaagtccacctgatgcaacttcaccat
cagcaccagcagcagcagcaacatcaacagcaacaacaacagcagcagcagcagcagcag
cagcaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcaacaacaa
caacaacaacaacatcaccaacaaaatcaaggtccagaccaggaatcctaccatccactg
tcccccagaacatcagcagccacagcccttcacaatgtagatgagtatgaacccagaggc
cccggtcggcctctctatcagcgccgcatctcctccacgtacccagacgaatcatctcca
gccagcactcacaacgccctgtcccagcagtcccagcagtcccagccctgcacgtcagac
tcccaggaccacccgcatccacacatacagcatcatcaacacccacatgctccatacggt
tatcccccacatgaccacctctggcccagtaacggcgggggtcccgctccgtttcagaac
attccgtgtaacggagccggcacactcgttcagcatcgggagcttctggcttccaagggc
ctccgtcagacagaggagcaggtaaagtccgaggtcacagcagcacagcagacgcaccca
cactccctcaactcccttcagcaccagtttcctcctctcatgcccaagaacaagcagcag
cagcagcagcagccgccgccgccgccgcagcagccgccgccgctgcagcagcagccgccg
ccgcagcaacagcaacaacaacaacaacaacaacagcagcagccgccgccgcaacagcag
cagcagcagcagcagcagccgccgccgccacctccgccaccacaggctcccacagagccc
agccagggggctccgaatttaagcaagccacccaccatgtcctacgcgagcgccctccgc
gctccacccaagccccgggctgttcggcctgaacaggtcaaaaagaacagcgaccctctc
tccctcctacaagagctgagtataggaagttcaaacggtagcaatgggtactattcctac
tttaaatga
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