Embiotoca jacksoni (black perch): 138209848
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Entry
138209848 CDS
T10523
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
eja00535
]
138209848
Proteoglycans [BR:
eja00535
]
Extracellular matrix (ECM) proteoglycans
Others
138209848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
138209848
NCBI-ProteinID:
XP_069024741
LinkDB
All DBs
Position
Unknown
AA seq
1875 aa
AA seq
DB search
MHFSVRPSLCLLGFLLVCVLPQPARGQVSSPRRFRAKVQGADKLHVSWKEPKGEFESYKV
VYSTRPGGEQKVVPVSKQEAKLLIEDFDPSKEYNFKISAVSGGRESKPLQAKHEAHRSAV
EAPQSQRRESGGAAEENNEISEAEDGFMCKTPAISDIVILVDGSWSIGRINFRLVRTFLE
NLVRAFSVEFDRTRIGLAQYSGDPRIEWHLNAHTTKQAVIDAVKNLPYKGGNTLTGLALT
FILENSFKPESGSRPGVPKIGILITDGKSQDDVIPPAQSLKDAGIELFAIGVKNADENEL
KAIASPPEQTHVYNVADFSVMSDIVEGLTKTVCDRVEQLDRQIKGGREPAPPPAAVAPPR
DLVTSEITARSFRVRWTHAPGQVEKYRVVYYPASGGQPDEKVVQGTENSVELNYLNSLTE
YQVAVFAVYRSSASEALRGSATTLALPMVNDLQLFDITHSTMRVRWKTAAGASGYMILYA
PLTEGDPADEKEVKVADSVNEVDLEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLLP
ARNLVFSDVDHSSARLTWDAPSQKVKGYRVMFVKTKGVQTNEVDVGRVTTWLLRNLTSLT
EYTVGVFAIYDEGQADVVTDSFTTKTVPDPLDLKSSDISTQSFRVSWQHAASDVVLYRLT
WTPTDGGDGEEALVNGNINTYLIKGLSPSTEYEVLLAAIYGNEVESDELILVESTVERTT
TVATTTTTTAAPRHGVRNLRIDEETTFSLRVAWQPVDARNVRHYRLNYVSARGDRAEETR
TVPVGQSSLVLQPLLSDTEYKIAITPVYPEGDGPTAGQMGRTLPLSAPKNLRVSEEWYNR
FRISWDVPPSPTMGYRVVYQPLSAPGPALETFVGEDVNTMLIVNLLSGTDYSVKVIASYT
TGSSDALSGRAKTLYLGVTNLSTYQVRMTSLCSQWQPQRHASAYRVGIESLVGSQKQETK
LSGGTNRHCFNNLKPNMQYKISVFAQLQDGTEGPAVTTTEKTLPIPTPAPTKPPTTTPPP
TVPPAKEVCKAAKADLVFLVDGSWSIGDENFLKIIRFLYSTTGALDGIGPDGTQVAIAQF
SDDARTEFKLNSYNDKERLLDAINKIAYKGGNTKTGRAIQHVKENIFTAEGGVRRGIPNV
LVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDA
FKKIEEKLVTFVCEAATATCPSVPMSGSTTPGFRMMELFGLVENRYSTVSGVSMVPGTFN
TFPCFHLHSDALIAQPTRYLHPEGLPSDYTITLLFRLLPNTPEEPFALWEILNKNNEPLV
GVILDNGGKTLTFFNNDYKGEFQTVTFEGTEIKKLFYGSFHKLHIAISKTSARVVIDCKM
VAEKTINAAGNITTDGLEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWANRDKCCELPG
LRKEVDCPALPKACTCTQDSKGPPGPAGLPGGPGIRGARGDRGEPGPVGPTGPVGDTGVP
GAQGPPGPQGPSGRAIIGAPGAPGERGQKGEAGQQGTQGIPGRAGGQGREGPAGTRGLPG
KDGPPGRQGPPGTMGTPGAPGSPGTSGPPGKHGELGPPGLPGGKGDKGERGDLQSAASVQ
AIARQVCEQLIQSHMARYNSILNQAPSPPVSIRTVPGPPGEAGRQGNPGPQGEQGPPGRP
GFPGQNGQNGQPGERGQLGEKGEKGSPGVGVQGPRGPPGPPGAQGQGRTGSQGSSGRPGN
PGAPGRPGVPGPVGTAGPPGYCDQNSCVGYNVGEGEDLTDVGAVPAVQLPSNVFQNYGEV
EEDDPYRYYQPNYPAPRPVSPDDPRARRRAPQRSQRSQRSQRRGPTETESARRGDGPEER
RRQLTEAGRERSAAF
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgcacttctcagtccgaccgagtctctgcctgctgggcttcctcctcgtctgcgtgctc
cctcagcctgcgcgaggccaagtgtcgtcgccacggagatttcgtgccaaagtgcagggc
gccgacaagctgcacgtgtcgtggaaagaaccgaagggagagttcgaaagctacaaggtg
gtttactccacgcggccaggtggagagcagaaggtggttccggtatcgaagcaggaggcc
aagctgctcatcgaagacttcgacccgtcgaaggaatacaacttcaagatctccgcagtc
agcggcgggcgggagagcaaacctctgcaggccaaacacgaagctcatcgatcggccgtc
gaagcgccacagtcccagaggagagagagcggcggcgccgccgaggagaacaacgagatc
tccgaagccgaagatggatttatgtgcaaaactccggccatatccgacatcgtgatcctg
gtggacggctcctggagtatcggacgcatcaacttccggctggtcaggaccttcctggaa
aacctggtccgggctttctccgtggagttcgacaggaccaggatcggtttggcccagtac
agcggggacccgcggatcgagtggcatctgaacgctcacaccaccaagcaggccgtgatc
gatgcggtgaagaacctgccgtacaaaggagggaacacgctgacgggtctggctctgacc
ttcatcctggagaacagcttcaaaccagagtccggatccagacccggcgttcccaagatc
gggatcctcatcaccgacgggaagtcccaggatgatgtcataccccccgcccagagcctg
aaggatgctgggatagaactgttcgccatcggtgtgaagaacgccgacgagaacgagctg
aaggctatcgcctccccccccgagcagactcacgtctacaacgtggccgacttcagcgtg
atgagcgacatcgtggagggcctcaccaagacggtgtgcgaccgcgtggagcagctcgac
cggcagatcaaaggtggaagagaaccagccccgccccccgccgccgtggctccgccccgt
gaccttgtgacctcggagataacggcccgcagcttccgggtgaggtggacccacgcgccg
ggccaggtggagaagtaccgggtggtgtactaccccgccagcggagggcagcccgacgag
aaggtggtgcaggggacggagaacagcgtggagctcaactacctcaactccctgacggag
taccaggtggcggtgttcgccgtctaccggagctccgccagcgaggcgctccgaggcagc
gccaccacgcttgccctgcccatggtgaacgacctgcagctgttcgacatcactcacagc
accatgagggtccgctggaagaccgccgccggggcttctgggtacatgatcctgtacgcc
ccgctgactgagggagaccccgccgatgagaaggaggtgaaggtggcggactcggtgaac
gaggtggacctcgaaggactgacgccggccaccgagtacacggtgacggtgtacgccatg
tacggggaggaggccagtgacccgatgacgagccagcagacaacgctgccgctgctcccg
gccaggaacctggtcttctcagacgtggaccacagctcggcccgcctcacctgggacgcc
ccctcccagaaggtcaaaggttaccgcgtcatgttcgtcaagaccaaaggagtccagacc
aatgaggtggacgttggccgcgtgacaacctggttgctaaggaacctgacgtccctgacg
gagtacaccgtcggcgttttcgccatctacgatgaaggacaagccgacgtcgtgacggac
agtttcaccacgaagaccgtgcccgaccctctggatctgaagagtagtgacatctccacc
caaagcttcagggtgtcatggcaacatgcggcgtccgacgttgtgctgtaccgcctcacc
tggacgcccaccgacggaggagacggcgaggaggctctggtgaacgggaacatcaacaca
tacctgataaaaggactgagtccctccacggagtacgaggtgctgctcgccgccatctac
gggaacgaggtggagagcgacgagctgatcctcgtcgagtccaccgttgaaagaacgact
accgtcgccacgacaaccaccaccacagcagctcctcggcacggcgtgaggaacctgagg
atcgacgaggagacgaccttcagcctgcgggtcgcctggcaacccgtcgacgccagaaac
gtccgacattaccggctgaactatgtcagcgcgaggggagaccgagccgaggagacgagg
acagttccggtcggtcagagcagtctggtcctgcagcctctgctctcggacacggagtac
aagatcgccatcacgcctgtttaccccgaaggagacggaccgacggcaggacagatggga
cgaacacttcctctttcagccccgaagaacctgcgtgtctcagaggagtggtacaaccgc
ttcaggatcagctgggacgtcccaccatcacccaccatggggtaccgggtcgtctaccag
cctctgtccgcacccggtccggctctggagaccttcgtcggggaggacgtgaacaccatg
ctgatcgtcaacctgctgagtggcaccgattacagcgtcaaggtcatcgcctcgtacacc
accgggtccagcgacgccctgtcggggagggccaagaccttgtacctcggggtgaccaac
ctcagcacgtatcaggtgcggatgacgagtctgtgcagccagtggcagcctcaacgccac
gccagcgcctaccgggtcggcatcgagtcgctggtcggaagtcagaagcaggagacgaag
ctgagcggaggaacaaacagacactgtttcaacaacctgaagcccaacatgcagtacaag
atcagcgtgttcgctcagctgcaggacgggacggaaggacctgcagtcaccaccacggag
aagacactacccatcccgaccccggcgcccaccaagccccccaccaccaccccgcctccc
accgtcccccccgccaaggaagtctgtaaggcagccaaggccgacctcgtcttcctggtc
gacggctcctggagcatcggcgacgaaaacttcctgaagatcatccgtttcctgtacagc
accaccggagcgctggacgggatcggaccggacggcacgcaggtggccatcgcccagttc
agcgacgacgcccgaaccgagttcaagctgaactcgtacaacgacaaggagcgtctgctg
gacgccatcaacaagatcgcctacaagggaggaaacaccaagacaggtcgagccatacag
cacgtgaaggagaacatcttcacggcggagggcggagtcaggagggggatccccaacgtc
ctggtcgtcctgaccgacggacgatcccaggacgacgtcaacaaagtctccaaggagatg
cagatggaaggttacatcgtgttcgccatcggcttcgccgacgccgactacggcgagctg
gtgagcatcgccagcaaaccaagcgacagacacgtcttcttcgtggacgacctggacgcc
ttcaagaagatcgaggagaaactggtgacgttcgtgtgcgaagccgccaccgccacttgt
ccatctgtaccgatgagcggcagcacaacgccaggtttccgtatgatggagctgtttggg
ctggtcgagaaccgctacagcaccgtctccggcgtttccatggtacccggcaccttcaac
actttcccctgtttccaccttcacagcgacgccctgatcgcgcagcccaccaggtacctc
caccccgaggggctgccctccgactacaccatcaccctgctgttcaggctgctgcccaac
acgcccgaggagcccttcgccctctgggagatcctcaacaagaacaatgagccgctggtg
ggagtcatcctggacaacggaggaaaaactctgaccttcttcaacaacgactacaaagga
gagtttcagacagtcaccttcgaagggacggaaatcaaaaagctcttctacggcagcttc
cataagcttcacattgcgatcagcaagacgagcgccagagtggtgatcgactgcaagatg
gtggctgagaaaaccatcaacgcggcgggaaacatcaccacggacggcctggaggttctg
ggcaggatggtccgctccagggggaacaaggacaactcggcaccgttccagctccagatc
tttgacatcgtctgcagcacctcgtgggccaacagagacaagtgctgcgaacttcctggt
ctgaggaaggaggtcgactgtccggccctgcccaaagcctgcacctgcacccaggacagc
aaaggccccccaggccctgctggactaccaggcggtccgggaatcagaggagcccgagga
gaccgcggagagcccggcccggtggggccgaccggtcccgtcggggacaccggtgtaccc
ggagctcagggacccccggggccacagggacccagcggtcgcgccatcatcggagccccg
ggcgctccgggcgagaggggccagaaaggagaggcgggacaacaaggaactcagggaatt
cctggtcgagccggaggtcaaggaagagaaggacctgcaggaaccagagggctgccaggg
aaggacggccccccgggcagacaggggcccccgggaactatggggaccccaggagccccc
ggatccccgggaacctccggccctccgggaaaacacggagaactgggaccaccgggtctt
cctggaggcaaaggagataaaggtgaacggggtgacctccagtcggcggcgtcggttcag
gccatcgccaggcaggtctgtgagcagctcatccaaagccacatggcgcgctacaactcc
atcctgaaccaggcgcccagtccaccggtgtccatccgcacagtgcccggaccccccgga
gaggccggccgacagggaaacccgggtccccagggagaacagggacccccgggaagacct
ggcttcccagggcagaacggacaaaacgggcaaccgggagaaagaggtcaactaggagag
aagggcgagaagggatctccgggtgttggtgtccaaggacccagaggacctccaggacct
cccggtgctcaaggacaaggccgaaccggcagccagggttcgtcggggcgacccggaaac
cccggagcccccggtcgacccggggtccccggacccgtcggcaccgcgggacctccgggt
tactgcgaccagaactcctgcgtgggctacaatgtcggagagggcgaggatctcactgac
gtcggcgctgtccccgcagtccaactgccgtccaacgtcttccagaactacggcgaggtg
gaggaggacgacccgtaccgctactaccagcccaactacccggcgccgcgccccgtgtcg
cccgacgacccccgcgctcggcgacgtgcaccgcagcgctcgcagcgctcgcagcgctcg
cagcgtcgagggccgacggagaccgagtcggctcgaagaggagacggaccggaggagcga
cggcgccaactaactgaggcgggacgcgagcggagcgccgctttctga
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integrated database retrieval system
