Embiotoca jacksoni (black perch): 138209913
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Entry
138209913 CDS
T10523
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138209913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138209913
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138209913
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138209913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
138209913
NCBI-ProteinID:
XP_069024827
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKVDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSVQVDAVRKIKDDVEYYMDSSQDPDFEENEFLYDDLDLEDIPQSLLA
TSPPGHSHLEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSSSSSSVSGLTSSSLVSMATIAGGGSGGSGGNGHHG
NPGSLLLSNTSAGSYSNATQQQPSTQQQQQQQQQQQQQQQQQAKNSITSSSPSSSSVPIS
NPSTSTSSYPVSSSSTSSSPPNATTQGLFTSISQLQALSGSTPTSNSLGLSLGLSLGKGG
MSGSITTSPMSGGLGLSGMPASLSTMAGLLSSSTPAPYAQAAASGAIGSGLPGSFGGVGA
ATTIGGVGSIGGGNLTVGGPTSSPGGLLGAAPGLGSIGSGILGLGSGQSGMQGSSLVSLS
PVGGLAPGSGVGVIGSNGGSSGSAGGGVTGGNSSLSVRPPSRQKQNGSTSYSAVLADSTT
DSALNSASQSQSSQPLSLTSTANQPKDTGPSLLGSLSLSSSSPSPASYSEAKAVSGGSLL
NGPLSYSQSDSIKPQEPLSSLKSMAERAALSSGIEGDVSSLHLNPDIFPSSTAAPSGPPS
APQPSLSEVSIPPSLGVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDSERIRQYLMRNP
SPTLPFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKY
MMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggaa
ggagttgaacagtttgaagacatttggcaaaagcttcacaacgcagccaacgcgaaccag
aaggagaaatatgaagcagacctcaagaaagagattaaaaagctacagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaaaaggcagctcgtagagaac
cgcaaactcatagaaacgcaaatggagcggttcaagatcgtggaacgagaaaccaaaacg
aaagcgtactcgaaagagggtctgggtctggcccagaaggtggacccggcccagaaggag
aaggaggaggtcggcacgtggctcacgaacacgatagacacgctgaacatgcaggtggac
cagttcgagagcgaagtggagtctctgtcggtccagaccaggaaaaagaaagtagacaaa
gagaagcaggaccggattgaggagctgaagaagtttatcgagaagcatcggtaccacatc
cggatgctggagacgatactgaggatgctggacaacgactcagtgcaggtggatgccgtc
aggaagatcaaggatgacgtggagtattatatggactcgtctcaggatcccgacttcgag
gagaacgagtttctctacgacgacttggacctggaggacattcctcagtcgctgctcgcc
acctccccaccgggacactcgcacttggaggacgagatcttccagcactccagcagcacc
cccacctccaccacctcgtcctcgcccatccccccgtcgccggccacttgcactacagag
aattcggaagacgacaagaagcgtggacgttcgacagacagtgaagtcagtcagtcgccc
gtgaagaacggaaacccctcatcctcgttatcttcctcttcttcctcctcctcctcctct
tcctcctcctcctcctcttcttcttcctccgtctcgggactgacctcatcctcattggtc
tccatggcgaccatcgccgggggaggaagcggcggctctgggggcaacggtcatcacggc
aacccggggagtctcctcctctccaacacctccgctggcagctacagcaacgccacccag
cagcagccgtcaacgcagcaacagcaacagcaacagcaacaacagcagcagcagcagcag
cagcaggccaaaaactccatcacctcctcctccccctcctcctcctcagtgcccatctcc
aaccctagcacctccaccagcagctaccccgtctcctcctcctccacctcgtcctctccg
cccaacgccaccacgcagggcctcttcacctccatctcccagctgcaggcgctgtcgggc
tccacgccgacctccaacagcctgggcctcagcctgggtctctctctggggaaaggcggc
atgtccggctccatcaccaccagcccgatgtccgggggcctcggcctgtcggggatgccg
gcgtccctgagcaccatggcgggcctcctgtccagctccactccggcgccctacgctcag
gccgccgcctcgggcgccatcggctccggcctgccgggctccttcggcggcgtcggcgcc
gccacgaccatcggcggggtgggctccatcggcggcggaaacctcacggtcggcgggccg
acgtcctcgccgggcgggctgctcggagcggcgccggggctcggcagcatcggctccggg
attctgggtttgggttccggtcagtcggggatgcaggggtcctccctggtgtcgctcagc
ccggtggggggtttagcgccgggtagcggagtcggagtgatcgggagcaacggaggcagc
tcgggctcagcggggggcggagtcacgggaggaaactcgtcgctctcggtccgaccgccg
agccgacagaagcagaacggtagcacaagttacagcgctgtgttagcagacagcacaaca
gactccgccctcaacagtgccagccaatcacaaagcagccaaccattgtctttgacctcc
acagccaatcagcctaaggacacgggtcccagtttactgggctctctgagtttgtcgtcc
agctccccgtcgccggcctcctacagcgaggccaaagcggtgagcggcggcagcctgctg
aacggaccgctgtcctactcgcagtccgacagcatcaagccccaggaacctctgagcagc
ctcaagtccatggccgagcgagcagcactcagctcagggatcgagggagacgtgtcctcc
ctgcacctcaacccagacatcttccccagcagcacggcggccccctccggccccccgtcg
gcgcctcagccctcgctgtcggaggtcagcatccccccgtcgttgggggtgtgtcctctg
gggccggtgcccctgtccaaagaccagctctaccaacaggccatggaggaggcggcgtgg
acgcacatgccgcacccgtccgactccgagagaatcaggcagtacctgatgaggaacccc
agccccaccctgcctttccaccaccaggtgccgccgccccactcggacaccgtggagttc
taccagaggctctccacggagaccctgttcttcatcttctactacctggagggcactaag
gcccagtatctggcagccaaagccctgaagaagcagtcgtggaggttccacacaaagtac
atgatgtggtttcagaggcacgaagagccgaagaccatcacggacgagttcgagcaggga
acgtacatttactttgactacgagaaatggggccagcggaagaaggaaggtttcacgttt
gagtaccggtaccttgaagaccgagacctccagtga
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