Embiotoca jacksoni (black perch): 138210002
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Entry
138210002 CDS
T10523
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03320
PPAR signaling pathway
eja04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
138210002 (rxrba)
03320 PPAR signaling pathway
138210002 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138210002 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eja03310
]
138210002 (rxrba)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
138210002 (rxrba)
Nuclear receptors [BR:
eja03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
138210002 (rxrba)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
138210002
NCBI-ProteinID:
XP_069024983
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLVPSAASMTSLPPITTAGVNSPISSIGSPFSVIS
SSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLKQMSPHSPGPML
SQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMVDKRQRNRCQY
CRYQKCLAMGMKREVAKMNDRSVQEERQRNREREGEVESTSAVNEEMPVEKILEAEMAVE
QKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGW
NELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRAHNAEVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIILFNPDAKGLSNPSEVELLRERVYASLESYCKQKYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtagagattctcgcagcccagacagctcgtctgtgtcctccccgccgtcg
ggccagcgctcgcctccgctggttccctcggccgcttccatgacctccctgcctcccatc
accaccgccggggtcaacagtcccatcagtagcatcggctcccccttttccgttatcagc
tcctcgctgggctcgccctgcctacccggcacaccgtcggtgggttacggcccgatcagc
agcccccagatcaactcaacagtgtccatgtcagggctccatgcagtgagcagctccgac
gatgtgaaacctccactgggcttgaagcagatgtccccccacagcccagggccgatgctt
tcccagaaacgcctttgtgccatctgcggagacagatcctccggtaagcactatggtgtc
tacagctgtgagggctgcaaaggcttcttcaagcgaacagtgcgcaaagacctcacctac
acctgtcgggacaacaaagactgcatggtggataagagacagaggaaccgctgccagtac
tgtcgctaccagaagtgcctggccatgggcatgaagagagaagtggccaagatgaacgac
agatctgtccaagaggagcgacagaggaacagggaacgagagggcgaggtggagtcaacc
agcgccgtgaacgaggagatgccggtggagaagattttggaggcggagatggcggtggag
cagaagacggagcttcacgccgacggaagttcaggcggcagctctcccaacgatcctgtc
accaacatctgccaggcagcagacaagcagctcttcaccctggtggagtgggccaagagg
atccctcacttctccgagctgcccctggatgaccaggtcatcttgctacgtgcaggatgg
aatgaactcctgattgcgtcgttctcccatcggtccatctccgtgaaggacgggatcctg
ctggccaccggcctgcatgtccacaggaacagtgcccacagcgcaggtgtcggagccatc
tttgacagggcgcacaatgccgaggttggggccatatttgacagggttttgacagagctc
gtgagcaagatgagagacatgcaaatggacaagacagaactgggctgccttcgagcaatc
atcctcttcaacccagatgccaagggtttgtccaaccccagtgaggtggagctcctgaga
gagcgggtgtacgcatcgctagagtcttactgtaaacagaaataccctgaccagcagggc
aggtttgcaaagctcctcctgcggctcccggcgctgcgctccatcggcctgaagtgcctg
gagcacctgttcttcttcaagctgatcggtgacacgcccatcgacaccttcttgatggag
atgctcgaggcgcctcaccagctcacctag
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