KEGG   Embiotoca jacksoni (black perch): 138210035
Entry
138210035         CDS       T10523                                 
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
eja  Embiotoca jacksoni (black perch)
Brite
Transcription machinery [BR:eja03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     138210035 (chd1)
Chromosome and associated proteins [BR:eja03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     138210035 (chd1)
    SLIK complex
     138210035 (chd1)
SSDB
Other DBs
NCBI-GeneID: 138210035
NCBI-ProteinID: XP_069025041
LinkDB
Position
Unknown
AA seq 1800 aa
MAARSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDAAKSKEKMDPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQRQSSSN
SGSDEDSSSSDESDSSSGSKRRRNSGSSDSGSGSGSGSGSGSDSSAEDNSDETASDYEPS
HKIKSRKPPTKMNFRNGKKSSAQRKKAPKGSSSDDDDDNYKKMASAGPRRQATVNISYKE
DEDLKTDSDDLVEVLGEDVPQPEEDEFETLEKVMDSRIGRKRAVGSVTTVYTIEADGDPN
ANFNPNKEAGDVQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQEKKRWLK
AASPEDVEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWE
DGALIGKKFQKCIDCYMSRNQSKAIPFRECKVLKQRPRFVPMKKQPTYIGGDGLELRDYQ
LDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLSTLTSW
QREIHLWAPQMNVVVYLGDISSRNMIRTHEWMHVHNKRLKLNILLTTYEILLKDKSFLGG
VSWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
HSWEIFEEDHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQY
YKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKLPEDEFLNRAEALQQLIRS
SGKLVLLDKLLLRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEMRKQA
LDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQ
VNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNKEELS
AILKFGAEELFKEPEGEEQDPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSM
MEEEEIDIDSERSQRSWDDIIPGEQRRRMEEEERQKELEEIYLLPRMRNCAKQISFNASE
GRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPLE
RLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKTSGGRRGKVKGPTFRIS
GVQVNAKLVISHEEELAPLHKAIPADPEERKKYIIPCHSKAAHFDIDWGKEDDSSLLIGI
YEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQ
AGTANSRKRKPRSKKSKTLKPAKTEEVVKSPSSDVPSDKRSDEEEEQEEEEEITPVKTPS
RRSRPERVVIKEEEEEEEDEDEDDEEPEQEELSSSGEREVKEKEVKKEGKKEKKEESGDI
KETKETKEKKETKEAVHKQEESSDKNEVKPEVRDRTKKASDVPIHNTASGESVPGSEESE
ELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSN
PELIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTRGGNAHGYKHAD
IERLKDNSHQDDSSRDSYSSDRHPPSARYHDNSSSSKERHGSESHRKTSAGESRKRPYSS
FSNGKDHRDRDHYRPDSRDRDRDRQDRYYNDSKHRKLEDFRSSRDHRLDMKDHSHSDHRS
SYRYHSDWQTEQRASASGPRSPRDQRSPYDSRSPLGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq 5403 nt   +upstreamnt  +downstreamnt
atggctgcacgcagcgaggacgagagcgtgagcaacagcagcggagaatccagtaattct
gacgatgaatccggttctggatcgggctcggcgtcggggtccggctcaggctccagttcc
agctcctccagcagcagcagccaatcagggagcagcgactcaggaagtggctcagactcc
ggcagccagtcagactctgacgcggcgaaatccaaggagaagatggatccaccaaataag
tccaacatcgacggagccgagttctggaagtcgaacccaagcatcctcgcggtgcaaaga
tctgctatgctcaggaaacagcagctccagcagcagcaacagagacagagctcctccaac
agtggatccgatgaggactcctcgagtagcgacgagtccgactcatcgagtggatccaaa
aggagaagaaattcaggctcctccgactccggatcgggttctggatctgggagcggttct
ggatcggactcatcggcggaggacaacagcgatgaaacggcatccgactacgagcccagt
cacaaaatcaaaagcagaaagcctccaaccaagatgaactttcgtaacggaaagaaaagc
agcgcgcagaggaagaaagccccgaagggctcttcctccgacgatgacgacgataactac
aagaagatggcgtcggcggggccgcgtcggcaggccaccgtcaacatcagctacaaggag
gacgaggacctgaagacggactcggacgacctggtggaggttctgggcgaagatgtcccg
cagcccgaggaggacgagttcgaaacactggagaaagtgatggacagcaggataggaagg
aaaagagcagtcggaagtgtaaccactgtatacacaatagaagcagacggagaccccaac
gccaacttcaaccccaacaaagaggccggggacgtccagtacttgataaagtggaagaac
tgggcccacatccacaacacgtgggagaccgaggagacgctcaaattacagaacgtcaag
ggcatgaagaagctggacaacttcaagaagaaggatcaggagaaaaagagatggttaaag
gcggcttcaccggaggatgttgaatatttcaactgtcaggaggagctgatggacgacctg
cactctcagtaccagctggtggagcgaatcatagggcattcaaaccagaagtcggcggcg
ggctacccggactacctgtgcaagtggcagggtttaccgtactcggagtgcagctgggag
gacggcgcgctgatcggcaagaagttccagaagtgcatcgactgctacatgagcagaaac
cagtccaaggcgattccatttagagaatgcaaggtgctgaagcagagacctcggttcgtg
cccatgaagaagcagccgacgtacatcggaggggacggcctggagctccgagactaccag
ctggacagtctgaactggatggcccactcctggtgcaaaggcaacagttgcatcctcgct
gatgagatgggtttggggaaaaccatccagaccatctccttcctcaactacctgttcaac
gagcaccagctgtacgggcccttcctgctggtggtgccgctctccacgctcacctcctgg
cagagagagatccacctgtgggccccgcagatgaacgtcgtggtctatctgggagacatc
agcagcaggaacatgatcagaactcatgagtggatgcacgtccacaacaagaggctgaag
ctgaacatcctcctcaccacatacgagattcttctcaaagacaagtcgttcctgggcggc
gtcagctgggccttcatcggtgtggacgaggcgcaccggctgaagaacgacgactccctt
ctctacaagaccatgatcgacttcaagtccaaccaccggctcctgatcaccgggacgccg
ctgcagaactccctgaaagagctctggtccctgctgcacttcatcatgcctgagaagttt
cactcgtgggagatcttcgaggaggaccacggtaaaggccgggactcgggctacaccagc
ctgcacaaagagctggagccgttcctgctgcgccgcgtcaagaaggacgtggagaaatct
ctgccggccaaagtggagcagattctccgagtggagatgagcgccatccagaagcagtat
tacaaatggatcctgaccaggaactacaaggctctgagtaaaggtaccaaaggcagcacg
tcgggcttcctgaacatcatgatggagctgaagaagtgctgtaaccactgttaccttatc
aaactgccggaggacgagttcctcaacagggctgaagctctgcagcaactgatccgcagc
agtgggaagctggttctgctggacaaactgttgctgcgtctgaaggagagaggccaccgc
gtcctgatcttctcccagatggtgcggatgctggatatcctggccgactacctgcggagc
cggcagttcctctttcagaggttagacggctccatcaagggggagatgaggaagcaggcg
ctggatcattttaacgctgaaggctccgaggacttctgcttcttgctgtctacgcgtgcg
ggcggtctgggcatcaacctggcgtcggccgacaccgtcgttatctttgactcagactgg
aacccccagaacgacctgcaggctcaggccagagcccaccggatcggccagaagagacag
gtgaatatctaccgtctggtgaccaaaggctcggtggaggaggacatcatcgagagggcg
aagaagaaaatggtgctggaccacctggtcattcagaggatggacaccacggggaaaact
gtcctccatacgggcgctgctccctccagttcagcgccgttcaacaaggaggagctgtcg
gccatcctgaagtttggtgctgaggagcttttcaaagagccggagggcgaagagcaggat
cctcaggaaatggacatcgacgagatcctgaagagagcggagacgagggagaacgacccc
ggaccctccacggtgggggaggagctcctgtctcagttcaaggtggccaacttctccatg
atggaggaagaggagatcgacatcgactctgagcgaagccagaggagctgggacgacatc
atccctggggagcagaggaggaggatggaggaggaggagagacagaaggagctggaggag
atttacctgctgcctcgcatgaggaactgtgccaaacagataagctttaacgctagcgaa
ggccggcagagtaggaacaggaggtactccgggtcggacagcgactccccctcagaccgg
aagaggccaaagaaacgaggacggcctcggaccatcccgcgagaaaacatcaagggtttc
agtgatgctgagatccggaggtttgtcaagagctacaaaaagtttgggggaccgctggaa
aggttggacgcgatcgctcgggacgctgaactcgtggataagtccgaacatgacctgaaa
cgtttggcagagacggttcataacggatgtgtgaggacgctccgagaaaacccctgtgga
ccagagaagacctcaggcggcagaagagggaaggtgaaaggcccgacgttcaggatctct
ggagtccaggtgaacgccaagctggtcatctcccacgaagaagagctggcgccgctgcac
aaggccattcctgccgaccccgaggagagaaagaagtatataatcccgtgccactcgaag
gcagcacacttcgacattgattgggggaaggaggacgactcgagcctcctcataggaatc
tatgaatatggatatggcagctgggagatgattaagatggacccggatctcaacctgaca
cacaagctcctaccagacgaccctgacaagaagccgcaggccaagcagctgcagaccaga
gccgactacctcatcaagttactgagcaaggacctggccaagaaagaagcccagaaacaa
gcggggacggccaactcacgcaagaggaaacccaggagtaaaaagagcaaaaccctgaag
cccgccaagaccgaagaggtggtgaagagcccgtcctcggacgtcccatcggacaagagg
tccgacgaggaggaggagcaggaggaggaggaggagatcacgccggtgaagacgccgagc
agacgcagccgaccggagcgggtggtgatcaaggaggaggaggaggaggaagaggacgag
gacgaggacgacgaggagcccgagcaggaggagctgtcttcatcgggggagcgcgaggtg
aaggagaaagaggtgaaaaaggaagggaagaaggagaagaaggaggagagcggcgacatc
aaagagaccaaggagacgaaggagaagaaggagacgaaggaggcggtgcacaagcaggag
gagagctcggacaagaacgaggtgaagccggaggtacgagatcggaccaagaaggcatcc
gacgtgccgatccacaacacggcgagcggagagagcgtgccggggtccgaggagtccgag
gagctggaccagaggaccttcagtgtgtgtaaggagaggatgcggccggtgaaagcagcc
ctgaagcagctggacaggccggagaaaggactgtcggagcgcgagcagctggaacacacc
cggcagtgcctcatcaagatcggagaccacatcaccgagtgtctgaaggagtactccaac
cccgagctcatcaaacagtggagaaaaaacttgtggatattcgtctccaagttcaccgag
ttcgacgccagaaaactccacaaactgtacaagcatgcgatcaagaagaggcaggagaac
gcccaggcgatggagcagaacaccagaggagggaacgcccacggctacaaacacgcagac
atcgagaggctgaaggacaactcgcaccaggacgacagcagcagggacagctacagctcc
gacaggcatccgccgtcggcccgttaccacgacaacagcagcagcagcaaggagaggcac
ggctccgagtcccacaggaagacctcggcgggggagtccaggaagaggccgtactcctcc
ttcagcaacggcaaagaccaccgggacagagaccactacagaccggacagccgggacaga
gacagagacagacaggacagatactacaacgacagcaagcacaggaagctggaggacttc
cgcagcagcagagaccaccggctcgacatgaaggatcattcccactcggaccaccgctcc
tcctaccgctaccactccgactggcagacggagcagcgggcctcggccagcgggccccgc
tccccccgagaccagcgctccccgtacgactcgcgctcgccgctgggtcaccgctcgccg
ttcgactactcctcagaccacaagagcacaccagagcagatctggagcagccgcaagaca
taa

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