Embiotoca jacksoni (black perch): 138210037
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Entry
138210037 CDS
T10523
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
eja Embiotoca jacksoni (black perch)
Brite
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
138210037 (taf1c)
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
138210037
NCBI-ProteinID:
XP_069025045
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Position
Unknown
AA seq
1097 aa
AA seq
DB search
MDYQFPRQLFPSFYNCGPPNSVLRHCAGDWGCYSGVRPQVGPPRSDQHGPLDTRRREPDR
PGGSGPLSSWTFTSKHQVRAETWRHTEPVPVPLLPPKNAFLWPLTPPDPLDFTEHMQNFF
MDHSQDAFGCMSDILGENFNFRRKVKKKYRNDSVNMWRVKYFLEMLKFNICPETYQSRVL
NGYSSLLSDVVHAVPPELLGSLLYEELTEQKDRLLFSEGATGGALAFVPFSQSSGSSQHG
CLLYPSSIGLDRLNFHTVELQHHRGSSSCVDTSSSKPVSFQLKGPIRQISCSCLFNDCCV
AVRSDHLCGVWRFGEGKEPRLLQVVDTREVATCISVSPHILGEVLVASESGAVNLWTVGR
GLQEVRAEDSNLYFNAKSPWRWCEFSAHPRVMLYADRTGVELSDMRESPVSSHTLFRISS
TSECRSGERLMLCRYLGDAHSFHHLITTQYSAYIMDERFPCVPMLKLDHMMQSPPVFCHV
VPGSASSGSVGELNTTKVLLGSGRSQEITLLQYSGGRAEASSSRGPPQALLRPRDSLNRL
PVQIPHRLHTAANRLSSPAAGLSGIQKRAASGVEECMCVLQLTEAGDIFYQILEPQQPLA
DTSRPPAADDQLELRRAARSQTRHSLKEATMLRRKAAEQLPAASQTVASNTSSDEDVVGP
TQGLTQHGVVPETPERQEPDSDSEDSQSRRRSQNLKRPWLQVVVNDDPELDQVNGLEAGG
NVAEDGGDEEEEETLLQLSNSILDTWKRWLQKLMQKSYKKKPRPHCSQHVTMDTTNLLRL
SDDNERDPSEKERVRRLREELRSGMFSRSLLLHGAVSAFIGAPDVVPVPTEVNAEHWTDP
VSQRLTVSWQGEEAWRAWWEDKLGMNKEAKVQALRRKRKKEKEAKRAGSHRWELTGSFTS
SVSYQSDLDDFSERGWSSAASQGEWSDTEGRRGSGRMLDVSEQETDGAPTSSTVRSETLL
PSPVNTPQRVEDGQDDQETPSWTRPISLSPTDSPASTPASRRRSSCPADDYLSSLVEPQD
GPSKHDGYFLEEGGSLPPRPPPAASSSRARTPPRTQRADLSKDFWLGSPQSLPFSQSSQA
RLSQASQPKNKKSRMGF
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggattaccagttcccgcggcagctttttccttcgttttacaactgcgggcctccgaac
tcggtcctgagacactgcgccggagactggggctgctactccggggtccgacctcaggtg
ggtccgccgcgctccgaccaacacggtcctctggacacacggagacgtgaacctgaccga
cctggcggctccggtcctctctccagctggacgtttacgtccaagcatcaggtcagagcg
gagacgtggcgtcacaccgagccggttccggttcccctcctgcctcccaaaaacgctttc
ctttggcctttaacgcctcctgatccactggacttcacagaacatatgcagaacttcttc
atggatcactcgcaggacgccttcggctgcatgagcgacatcctcggagaaaacttcaac
ttcagaagaaaagtgaaaaagaaataccgcaacgattcagtgaacatgtggagggtgaaa
tatttcctggaaatgctgaagtttaacatatgtcctgagacgtatcagtccagagtgctg
aacggctacagcagcctgctgtcggacgtggtgcacgccgtccctccggagctgctgggc
tcgctgctgtacgaggagctgacggagcagaaggaccggctgctgttctctgaaggagcc
accgggggcgctctggccttcgtccccttctcacagagcagcggcagctctcagcacggc
tgcctcctctatcccagcagcatcggactggaccgcctcaacttccacacggtggagctg
cagcaccacagagggagctcttcctgtgtggacaccagcagcagcaaacctgtcagcttc
cagctcaaaggccccatcagacagatcagctgcagctgcctcttcaacgactgttgtgtt
gccgtgcgctcagatcacctctgtggagtttggaggttcggtgaagggaaggagccccgg
ctgctgcaggtggtcgacaccagagaggtcgcgacctgcatcagcgtcagtcctcatatc
ttaggtgaagttctggtggcgagtgagagcggagcggtgaacctgtggaccgtcggccga
gggctgcaggaggtccgggcggaggacagcaacctgtacttcaacgccaagtcgccatgg
agatggtgcgagttctccgcccaccccagagtgatgctgtacgcagacagaacgggcgtg
gagctctcagacatgagggagagtccggtgtccagccacactctgtttcgtatcagcagc
acctcagagtgtcggagtggagagagactgatgctgtgcagatatctgggagacgcccac
tccttccatcacctcatcaccacacagtactcggcctacatcatggacgagcgttttccc
tgcgtgcccatgctgaagttggatcacatgatgcagtccccgcctgtgttttgtcacgtg
gttcctggctctgcctcctctggttcagtgggtgaattaaacaccacgaaggttctgctc
gggtccggcagatctcaagagatcaccctgctgcagtactcaggaggccgggcggaggcc
agttccagtcgaggtccacctcaggctctgctcagacccagagacagtctgaaccggctc
ccggtccagatcccacaccgcctgcacacggcagccaacagactgtcctcacctgctgca
ggtctgtctggtatccagaagagagcagccagcggtgtggaggagtgcatgtgcgtcctg
cagctgacggaggccggagatattttctatcagattctggagcctcagcagccgctcgcc
gacacgtctcgacctccggcggcagacgaccaactcgagcttcgacgagcagccagatca
cagacacgacattcactgaaagaagccacgatgttgaggagaaaagcagcagagcagctt
ccagcggcgtctcagacggtcgcgtcgaacacgtcgagcgacgaggacgtcgtcggaccc
actcagggtctgactcagcatggcgtcgtacctgaaacaccggagagacaggaaccagac
tctgactccgaggactcacagtcacgacgaagaagtcaaaacctgaagcggccgtggctg
caggtggtcgtcaacgacgatccagagctggaccaggtgaatgggttggaggctggcgga
aatgtggctgaagatggaggtgatgaggaggaggaggagactctactgcagcttagcaac
agcatcctggacacatggaaacgctggctccagaaactaatgcagaaaagttataaaaag
aagccccgcccacactgctctcagcacgtcaccatggatacgaccaacctgctgcgcctc
tccgatgataacgaaagagatccgtcagagaaggagcgtgtgcgccgcctgagggaggag
ctgaggtcaggtatgttctcacgctcgttgctgctgcacggcgccgtctccgccttcatc
ggggctccggatgtcgtaccggtaccgaccgaggtgaacgcagagcactggaccgacccg
gtcagccaaagactcaccgtctcctggcagggggaggaggcgtggcgggcgtggtgggag
gacaagctggggatgaacaaggaggcgaaggtacaggctctgaggaggaagaggaagaag
gagaaggaggcaaagagagccggcagccaccgatgggagctgaccgggagcttcacctcc
tccgtcagctaccagtcggacctggacgacttctccgagaggggctggtcctcagcggcg
agccagggggagtggtcagacacggaggggaggagggggagtggccgtatgctggacgtt
tcagagcaggagacggacggagcgcctacatcctccaccgttcggtctgagactctcctc
ccctcccccgtcaacacacctcagagggtcgaagatggacaggatgaccaggagactccc
agctggacccgccccatctctctgtccccgacagacagccccgcctccacaccggccagc
cggaggaggagcagctgtccagcggacgactacctcagctccctggtggaaccgcaggac
ggcccatcaaaacatgacggttatttcctggaggaggggggcagccttccccctcggcct
ccacctgcagcctcctcctctcgggcccgaacccccccgaggacccagagggcggatctc
tccaaggacttctggttgggctcccctcaatctctgcccttctcccagagttcacaggct
cgactgtcgcaggcgtctcaacccaagaacaagaagtctcggatgggattttga
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