Embiotoca jacksoni (black perch): 138210247
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Entry
138210247 CDS
T10523
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138210247 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138210247 (nup188)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138210247 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
138210247
NCBI-ProteinID:
XP_069025404
LinkDB
All DBs
Position
Unknown
AA seq
1748 aa
AA seq
DB search
MADSEMSVRSCRELWTILLGRSALREPAQIEAELDKHWDRLHQGLRYYKPPSSSSAGKVK
ENKDVAQPLKDFGLRISKILSLDEQQSVQLLQCYLQEDYRGTRESLKVVLKDERQSQALL
LKIADYYYEERMCLLRCVLLLLTYFQDERHPYRAEYSHCVNKLEKDLVSNYQSQFENLFK
AEAPTWETHGNLMTERQVSRWFLQCLREQSLLLEIIFLYYAYFEMSPSDLLSFTKMFKEQ
GFGLRQTNRHLVDKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDCTEQHQFSGAPDV
IKEMDQLLLTLGDIPHHGPVLLAWVLLRHTLRPDESNPVIRRIGNTALQLGVFKYFSTML
KGLGVSGNNCTASTAKMCIYGLLSFVITSFEEESLQTDGVATQCSHLIDAACEVLSAPSL
AEVFWEMKPNMGLGMILDSAAGMFPHKIGPLLQLLTALLSNKSTVKKVYNFLDKMSFYTQ
VYKHKPNDIVSKDDETLWRRQTPKLLYPLGTGQTNLWMPQGVLGQVMIGGEQGYVVRWDY
SFSSWTLFTCEVEMLLHVVSTADVIAHCARVKPLLDLVHKIISTDWTVSDCLLPLTSRIY
MLLQRLTSVINPPVDVIASCVNCLSVLAARMPAKVWASLHHTGFLPFASNPLTSMSQCVS
AEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLVTTLVKGQLGSTQNKGLIPCVLLVLKEM
LPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSTPTLQSLCIYSLANTEAGQ
AVVNIMGVGVDTIDMVLAAQPSSCGAEGPGQILIQTVKLAFSVTNNVIRLKPPSDAVSPL
EQALTQHSGHGNNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAI
RDAFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSEGSKEFLLGEWS
CLHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRTKAKFWENLTTPL
FGTLTPPSDTTEPCVLETCAFVMKIIGLEIYYAVSGSLEQSLKDGLQKFSNARRYEYWSQ
YVKSLVCHVAEMEEEGICYFPETQMLISAWRMLLILSTNHSDVMQLTEDSTKLKLFMDVL
DGTKAALTTPMSVPCLRLGSMMATLLLILLKQWKSVVAAAPDILSPLSLILESVLQADQQ
MMERTKAKIFSALISVLQIQGLNGGDISQLPQLLLSVCETVKDEVLALIDNTRHMSQTAD
TVEDEDSMETDSPRGLQKDQRDGVCVLALHLAKELCRTDEGGEHWVSVMRKVPVLPSVLS
AVELSLRSKHNLYFTEASLHLLLTLARTPQGAAAVAGAGVIQTICLPLLSVYEASSNGAS
QSFSRKSQDSACWPGVYRLCMSLMESLLKTLRYNFINEALDFVGVHQERILQCLNAVRTV
QSLACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDVQVNLCYLCQTCTYLLHSKKMLHH
YLQAKNGEALPPGPLPRTQRPPQTPTKEAAGGGGGEREEAEQKALLAVQCSLLKILSKTL
ATLQHFTPDCCQILLDQCMDLAEYRTLFALSFTTPAFDPDVAPSFGTLLATINVALSMLS
EMEKKKEPVSLSIASLASSEEIQALKSLLMFTMENCFYVLISQAVRCLKDPSILPRDKQR
LKQELSSELSTLLSSLSRHFRRGSPSSPAGGILPSAQSKPPTPGSKASHEGQEPFIQLVQ
AFVRLVQR
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcggagatgagcgtcaggagttgtcgagaattatggaccatactgctgggg
aggtcggcattgagagagccggctcagatagaggcagaacttgacaaacactgggacaga
ctgcatcaaggactccgttactacaaaccacccagctcatcgtctgctgggaaagtgaag
gaaaacaaagatgttgcacaaccactgaaggactttggtctgaggatcagtaaaatattg
agtcttgatgagcagcagagtgtgcagcttttacagtgctacctacaggaggactacaga
ggaacccgtgaatcattaaaggtcgttctcaaggatgagcggcaaagccaggcattactg
ctgaagatagctgactattactatgaggagcgcatgtgcctgctcagatgtgttctcctc
ctgctgacgtactttcaggacgagcgacatccctacagggctgagtacagtcactgtgtc
aataagctggagaaggacctggtgagcaactaccagtcacagtttgagaatctcttcaag
gcagaagcaccgacatgggaaactcatggaaacctcatgacggagaggcaggtgtctcga
tggttcctgcagtgtctgagagaacagtcgctgctgctggagatcatctttctctactac
gcgtactttgaaatgagcccatctgatctgctgagcttcactaaaatgttcaaagaacaa
ggctttggtttgcggcagaccaacagacacctcgtagacaagagcatggatgctctagtc
gaccggatcgggtacttgagctctctcatcctggttgaaggaatggacatagacttcctg
cacaagtgtgctctggaggattgtacagaacagcaccagttctctggtgctcctgacgtc
ataaaggagatggatcagctgctgctgactttaggtgacatccctcatcacgggccggtg
ctgttggcctgggtcctgctgagacacacactgagaccagacgagtccaacccagtgatc
aggaggataggcaacaccgccctgcagctgggggtgttcaagtacttctccaccatgctg
aaaggcctcggagtctcaggcaacaactgtacagcaagcacagcaaaaatgtgcatctac
ggcctcctctcatttgtgatcacgtcttttgaagaagaaagcctccagaccgacggtgtg
gcgacgcagtgctcccacctgatcgatgctgcctgcgaggtcctctctgctcccagcctg
gctgaagtcttctgggaaatgaagccgaacatggggctgggaatgatcctagacagtgca
gccggcatgttccctcataagatcggacctctgctgcagcttctgactgcactgctgtca
aacaagtccaccgttaagaaggtgtacaactttttggataagatgtctttctacacacaa
gtttacaaacacaaacccaatgacatcgtctccaaggatgacgagacgctgtggaggagg
caaacacccaaactcctctaccctctcggcaccgggcagacgaacctgtggatgccgcag
ggagttctgggccaggtgatgatcggaggtgaacagggctacgtggtgcgctgggattac
tccttcagctcctggactctcttcacctgtgaggtggagatgctgctccacgtcgtctca
actgcagatgtaatagctcactgtgcacgcgtgaagcccctcctggatctggtccataag
atcataagcaccgactggaccgtgtcagattgtctgctgccgctcacttcacgcatttac
atgctgctgcagaggttgacgtcggtcatcaaccccccggtggacgtgatcgcctcctgc
gtgaactgcctctctgtcctggctgccaggatgccagcgaaggtgtgggccagtctgcac
cacactggtttcctccccttcgcctccaaccctttgaccagcatgtctcagtgtgtcagt
gctgaggggatgaaagcaggtaactatggcaacctgctggtccagattgagcagcccagg
ggggagtatgccgtgaccatcgctttccttcgtctcgttacaactctggtcaagggtcag
ctgggcagcactcagaacaaaggtctgatcccctgtgtgctgctggttctaaaggagatg
ctgcccacgtaccacaagtggcgttacaacacctatggagtcagagagaggatcggttgt
cttattttggagctgatccatgctattctcaatctgagcccagagggagaggaccagggc
agcactcccaccctgcagtctctgtgcatctacagcctggcaaacactgaggctggacag
gctgtcgtcaatatcatgggagttggagtggacaccatagacatggtgctggctgcgcag
cccagcagctgtggcgccgagggtcccggtcagatcctgatccagacggtcaaactggcc
ttttccgtcacgaacaacgtgatccgtctgaagccgccgtccgacgccgtgtcccctctg
gagcaggcgctgacgcagcacagtggccacggcaacaatctcatcgttgtcctggccaaa
tatatttaccacaaacacgatccggcgctgcctcgcctcgccatccagctgctcaaaagg
ctcgccacggtggctcccatgtcggtctacgcttgcctcggcagtgacgcggcagccatc
cgggacgcgttcctcacgcggctgcagagcaagaccgaagacatgaggatcaaggtcatg
atcctggagttcctcaccgttgctgtggaaacgcagcccggcctcatcgagctcttcctc
aacctggaagtcaaagatgggagcgaggggtcaaaggagtttctgctgggtgagtggagc
tgtcttcacgtggtgttggacctgatagactctaaacagcaggggaaatactggtgtccc
ccgctgctgcaccgagccgccctggccttcctcctcgccctctggcaggatcgcagggat
agtgccatctccgtgttacgcaccaaagcaaaattttgggagaatttgacaacacctctt
ttcgggaccctcacccccccttcagacaccacggagccgtgtgttctggagacctgcgcg
tttgtcatgaagatcatcggcctggagatctactacgccgtcagcggttccttggagcag
tctctgaaggacggccttcagaagttctccaacgcacggcgctacgagtactggtcccag
tatgtgaagtcactggtgtgccatgtggccgagatggaggaggagggcatctgctacttc
cccgagacccagatgttgatctctgcctggcggatgctgctgattctgtccacgaaccac
tcggatgtgatgcagctaacagaagactcgaccaagctgaagcttttcatggacgtcctg
gacgggacgaaagctgctctgaccacgcccatgtctgtgccttgtcttcgtctcggatcc
atgatggccactctactcctcatcctcctcaaacagtggaaaagcgtggtggcagctgct
cccgacatcctgtctcccctctcgctcatcctggagagcgtcctgcaagccgaccagcag
atgatggagaggaccaaagccaaaatcttctccgcgctcatctccgtgctgcagattcag
ggactcaacggtggagatatttcccagctgccccagctgttgctgtctgtgtgcgagacg
gtgaaggacgaggtcctggcgctaatcgataacactcgtcacatgagtcagacggcagac
acggtggaggacgaggacagcatggagacggactctcctcgcggcctgcagaaggaccag
agagacggggtgtgtgttttagccctccacttagcgaaggagctgtgtcgcaccgatgag
ggcggggagcactgggtgtcggtgatgaggaaggtccccgtcctgccgtcggtgctcagc
gccgtggagctcagcctgcgctccaaacacaacctgtacttcaccgaggcgtctctccac
ctgctgctcacactcgcccgcactcctcagggcgccgcggctgtcgccggagccggagtc
atccagaccatctgcctccctcttctcagcgtgtacgaggcgtcgtcgaacggagcgtcg
cagagtttctcccgcaagtcccaggactccgcctgctggccgggcgtgtaccgcctctgc
atgtctttaatggagagtctgctgaagactctgcgctacaacttcatcaacgaagccctg
gactttgtcggagtgcatcaagaacgcatcctgcagtgtctgaacgccgtgcggacggtc
cagagcctggcctgtctggacgaggcggatcacacagtcggcttcctgctgcagctctcc
agcttctgtaaggagtggcagtttcaccttcccaaactgctccgggacgttcaggtaaat
ctgtgctatctgtgccagacctgcacgtacctgctgcacagcaagaagatgctgcaccac
tacctgcaggctaaaaacggcgaggcgttgccccccgggcccctccccaggacccagcgg
cccccccagaccccgactaaagaggcagcgggtggaggcggaggggagagagaggaggct
gagcagaaggccctgctggccgtgcagtgcagcctcctgaagatcctcagcaagacgctg
gcgacgctgcagcacttcacacccgactgctgccagatcctcctggaccagtgcatggac
ctggccgagtaccggaccctgttcgcgctcagcttcacgactccggcgtttgaccccgac
gtggctccttcgttcgggacgctgctggccaccatcaacgtggccctgagcatgctgagc
gagatggagaagaagaaggagccggtttccctgagcatcgcttcactcgcttcgtcggag
gagatccaagcactgaagtctctgctgatgttcaccatggagaactgtttctacgtgctg
atctctcaggccgttcgctgtctcaaagatccctccatcctccctcgagacaaacagagg
ctcaaacaagagctcagctccgaactgagcactctcctctcgagcctgtcccgccacttc
cggagaggatctccgtcgtctccggccggcggcatcctcccctccgctcagtccaaaccg
cccacgccgggctccaaggcgagccacgaaggacaggagccgttcatccagctcgttcag
gcgttcgtcaggctcgtgcagagatag
DBGET
integrated database retrieval system
