Embiotoca jacksoni (black perch): 138210342
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Entry
138210342 CDS
T10523
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138210342
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eja01009
]
138210342
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138210342
Protein phosphatases and associated proteins [BR:
eja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138210342
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Protocadherins
138210342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
138210342
NCBI-ProteinID:
XP_069025532
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MAALRRAVLAVVLLLASCGAAPTDILYRVPEEQPPNTLIGSLAADRGLPDTGHLYKLEVG
SPYLRVDGKTGDIYTTEIPIDRETLKDCRNVFEGDKCFLEFEVSITDMVKGIGSGPRLIE
GRIEVLDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGSNGVAEYSLSTGPDA
DQLFTLQVAVDSDEKLPQLVVMGNLDREKKDSYDLNIRVVDGGRPPRASSALLRVTVTDQ
NDNAPKFERSHYEAELPENSPLGHSVLQVRANDADTGTNGEIDYSLHQASETVQRLLRID
RSTGIIYVKGMVDREEESFLKFFVVAKDRGPNSKSSKVLVTINVRDQNDNAPAIEIRGIG
LVTHQDGVANISEDMPIGKPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRK
RKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSSNSLRVQVTDVNDNTPIFSPTLLEV
DFPEGNQPGDQVLYIVATDADSGTNAELVYSIVEPSATRLFEIDGNSGEVRVKNLLDREE
TERYEFRVAAADKGLPSKTGTATVVINVLDRNDNDPKFMLNGYSFSVIENMAPLNPVGVV
TVTDADKGENSQVRLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKAMDAGDPP
RSSYVGVTINVLDENDNAPYVTKPANSSYTYLTPVTPPETRVEVVEAEDIDAGPNAELYY
AITGGNPYGLFQISPNSGEITLAQEFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVFVNN
TKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVAVVVIR
HRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQKGL
KFNLITDNVNDSPRICLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQDL
PATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTANQAQDLQDASQHS
YYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMT
GNCTHECTEFGHSDSCWMPGQLSPDRKVSKNAAQLSTFVPYQEMDGQEQLMANGSPKPLT
MEERGPGGGSKVANMRFMTPYSSAYPGGGDSSGKDCGLEEIPLSQAVEYHSAATPTGQTS
KREIYL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgagacgggcggtcctggccgtcgtcctgctgctggcgtcgtgcggcgcg
gcgcccaccgacatcctgtatcgggttcctgaggagcagccgcccaacacgctgatcggc
agcctggcggcggaccggggtctgcccgacaccggccacctctacaagctggaggtgggc
tcgccgtacctgcgggtggacgggaagaccggagacatctacaccaccgagatccccatc
gaccgcgagacgctgaaagactgccgcaacgtgttcgagggcgacaagtgcttcctggag
ttcgaggtgtcgatcaccgacatggtgaagggcatcggatcggggccgcggctcatcgag
ggacgcatcgaggtgctcgacatcaacgacaacacgccgcagttctcctcgcccatcctc
accctgtccatccccgagaacacccacatcggcgccctcttctccatccccatggcgacc
gacagggactccggctccaacggcgtggccgagtactcgctgagcaccgggcccgacgcc
gaccagctcttcaccctgcaggtcgccgtggactcggacgagaagctgccgcagctggtc
gtcatgggcaacctggaccgcgagaagaaggactcgtacgacctgaacatccgcgtggtg
gacggcgggaggccgccgcgggcgagcagcgctctgctgcgcgtcaccgtcaccgaccag
aacgacaacgcgcccaagttcgagaggagtcactacgaggcggagctgccggagaacagc
ccgctgggacactcggtgctgcaggtccgagccaacgacgccgacaccggcaccaacggc
gagatcgactacagcctccatcaggcttcggagaccgtccaaaggcttctgcgcatcgac
cgctctacgggcatcatctacgtcaaaggtatggtggaccgagaagaagaaagtttcctc
aagttctttgtggtggccaaagatcgggggcccaattccaagagttccaaagtcctggtg
acgatcaacgtcagggaccagaacgacaacgccccggccatcgagatccgcggtatcggc
ttggtgacgcaccaggacggtgtcgccaacatctccgaggacatgcccatcgggaaaccg
gtggcgctggtccaggtgtcggaccgcgacgagggggaaaatgccgtggtgacgtgcgtg
gtcgccggtgacgtcccgttccagctccgacccgcgagcgagtccgccaacgatcggaag
aggaagtacttccttcagacgacgacgctgctggattacgagcgcgttaaggattacagg
atagaaattgttgccgtggattctgggaacccggcgctgtccagctctaactccctcaga
gtccaggtgacggacgtgaacgacaacacgccgatcttttcccccacgttgctcgaggtg
gacttccctgaaggcaaccagccgggcgaccaagtgctatacattgtggcgacggacgcg
gacagcggcaccaacgcggagctggtctacagcatcgtggagccctcggccaccaggctc
tttgaaatcgacggcaactccggggaggtccgcgtgaagaacctgctggatcgggaagag
acggagcgctacgagttccgcgtggcggcggcagacaagggcctcccgagtaaaaccggc
actgctacggtggtgataaatgttctggaccgcaatgacaatgaccccaagttcatgctg
aacggctacagcttctcagtcattgagaacatggctccgctcaatccggtcggcgtggtg
accgtcacggatgccgataagggtgagaattcccaagtgaggctctttgtggaaccggac
aacggcaagtttgtgatccagaacggcacgggaaccatcctgtccagcatctccttcgac
cgtgagaaggagagcacctacaccttccgcctgaaggccatggacgccggtgatccgcct
cgatcctcctacgtgggagtgaccatcaacgtcctggacgagaatgacaacgccccctac
gtcaccaaaccggccaactcctcctacacgtacctgacgcccgtcacaccaccggagacg
cgtgtggaggtggtggaggccgaggacattgacgccggacccaatgctgagctgtactac
gccatcacaggcggaaacccatacggcctattccagatctcacccaacagcggggagatc
actctggcgcaggaattcaccggcaaacacaaagggctccaccggctggtcgtgagagtc
agcgataaaggcaaacctcctcgccacaccaccgctctggtccacgtcttcgtcaacaac
accaagtccaacgtgtccctcattgaggcgctggtgggacacagcctctacacccctctg
gaccgggacattgccggagatcccaactacgccctcgctcagcgcagcaacatcctgtac
ggcagcctcgccggtatcgccggcgtgatcctggtcatcgtggccgtggtggtcatcaga
caccggctgcagaaggacaccaagagcggctaccaggccggcaagaaggaaagcaaggac
ctgtacgctcccaagcaggggcccaaaaatggcaaagggaaaaagagcaagaaggggaag
gctccgaaaccggccaagccgctggaggaggacgaggaggccagcctgcagaagggcctc
aagttcaacctcatcaccgataacgtcaacgacagccccagaatctgcctgcccctcaac
tacccgccgggaagccccgatctgggccgccactaccgctccaactcccccctcccgtcc
atccagctgcagccgcagtcgccctccgcctccaagaagcaccaggccgttcaggacctg
cccgccaccaacaccttcgtggggacgggcgacaacaactccacgggctccgaccaatat
tcggattacagctacaaggccaacccacccaaatacagcaacaaacagctgccccaccgc
cgagtgaccttctccacggccaatcaggcgcaggatctgcaggacgcgtcccagcacagc
tactacgacagcggcctggaggagtcggagacgccgagctccaagtcgtcgtcggggccg
cggatcgggccgctggcgctgccggaggaccactacgagcgcaccacgcccgacggcagc
atcggagagatggagcacccggagaacgacctcaggcctcttcccgacgtggcgatgacc
ggtaactgcacccacgagtgcaccgagttcggccactccgactcctgctggatgcccggc
cagctttcccccgaccgcaaggtgtccaagaacgccgcccagctctccaccttcgtgcct
taccaggagatggacgggcaggagcagctgatggccaacggcagccccaagcccctgacg
atggaggagcgcgggccgggcggcggctccaaagtggccaacatgcggttcatgacgccc
tacagcagtgcctaccccgggggcggagactcgtccgggaaagactgtgggctggaggag
atcccgctgagccaggcggtggagtaccactccgccgccaccccgaccggccagacctcc
aagagggagatctacctgtga
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