Embiotoca jacksoni (black perch): 138210343
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Entry
138210343 CDS
T10523
Symbol
pcdh12
Name
(RefSeq) protocadherin-12 isoform X1
KO
K16499
protocadherin delta 2
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138210343 (pcdh12)
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Protocadherins
138210343 (pcdh12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
138210343
NCBI-ProteinID:
XP_069025536
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All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MLLALLLVLSLCSETLTSELSSITIQYRVWEEQPAGSSVGRLVDDLRRRDEAGPLEDFQV
VEQGKALPFSVTTRDGVVSTQGRLDREQLCRGSDLCEVAFSVLYRKSGAVNCLRVRVEVM
DMNDHSPTFPSALQEVEISETAGLRMRIPLDRAVDPDAGPNSLQTYSLSVNQHFDLDVTV
ALGGTKQAELVVIKELDREVQASFDLTLVAWDKGNPPRSGSTLVRVHIQDSNDNSPTFED
CSPTVALTEDTALGTTIIKLKATDPDQGANGEVEYSFSKHTRPEVRRLFDVDQQTGAVSL
KAPLDYEAQSSHEVIVQASDRGPNAIPSHCKVHVKLTDVNDNAPRIRMTWTPANSRAATV
LEGAPVDTFLALVTVSDADSGDNGKVTAVIQEGSGPFRLKRIHGDNYMIVTDGRLDREDV
MKYNITLRAMDYGAPPLSCVEHLPVYVLDENDNSPAFSSSVYKASFKENNAAGHHALTVE
ADDVDLELSGRVSYSLSASVDQEAKTQYFSVHPKTGVISARRPLDYEESPSYSFIVQAVD
HGHPPLTSTATVQIDIEDVNDNYPTIKEPKPRKGVASLSVPVNAYKGEIVTELGNEVEEA
VTTLPINPSARDGLVGFLASTIKAEDLDSGLNGDLQYFITDGNPYGLFWLDQTTGQLFVN
TTNATELIGKTFKVDIAVSDMGTPSLTTKATLDVTFINLKDHLKNSSPGNRGRLSFTMMM
AVCLGATCLLLLLAIALVTTFCRPEKRDNRAYNCRQAESSYTRHPRRPQKNIRKSDIQLI
PVIRGRKEEPPQDDAEAQPLTPPPVSEDQQTERQYNLIPSVMNTSFHSQGYLEADATQPA
AHHSRTLRKPGNIELDGALPLTPATSYRTLRKSRNPSSSSSNSHSSTLKRQIHPDREAAE
LPRSASQATLRRPKTSDGRATQDADHRQMLRNLVRLSMAAFGDSIELSSASPEVQQISQL
LSLLHQGQLQPRTNFRGNKYSHRNGRYGGQDCSDWQSTKDSGHGESEAGDVDWEPGRESP
VDLQLEEGLNNLFNNPDEVFSEVSDPAWMARLSLPLAGDYHDNVFVPDGPPSPESEVLPR
SGLDSTSSSSFSTFGKTPEKDGPLGGALLSEVSTLFEMLMTQKADAHPGPRPDVLYRLSA
AYRRSLGLDAAGSANTTAAGNAPKNSGNTEKRAGPTASSGLYQ
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggctctgcttctggttctgagtctttgctctgagactctcacctccgagttg
tcgtcgataactatccagtaccgggtttgggaggagcagccggcgggatccagtgtcggc
cgtctggtggatgacctccggcggcgggacgaggccggtcctctggaggatttccaggtg
gtggagcagggcaaagcccttcctttctccgtcaccactcgagacggggtcgtctccacc
cagggccggctggacagggagcagctgtgccgcgggtcggacctgtgcgaggtggccttc
agcgtcctctacaggaaaagcggagccgtgaactgcctgcgggttcgcgtggaggtgatg
gacatgaacgaccacagtcccactttccccagcgctctgcaggaagtggagatctcggag
accgccggcctcaggatgcggatccctctggaccgggcggtggacccggacgccgggccc
aacagcctgcagacctactccctgtccgtcaaccagcactttgatctggacgtgacggtt
gctctgggtgggacgaaacaggcggagctagtggtgatcaaagagctggacagggaggtt
caggcctcctttgacctcaccctggtggcatgggacaaagggaacccacctcggtctggg
agcacattggtccgtgttcacattcaggactccaatgataacagccccacgtttgaggac
tgcagtcccactgtggcgctaaccgaggatacggccctcgggacgaccatcatcaagctc
aaggccaccgatccagaccagggcgccaacggggaggtggagtactcgttcagcaagcac
acacgtccggaggttcggcggctcttcgacgtggatcaacaaaccggagccgtgagtctc
aaagcacctctggattatgaggcccagtcctctcacgaagtgatcgtacaggccagcgac
cgcggacccaacgccatcccctctcactgcaaagtccacgtcaagctcacggacgtcaac
gacaacgcgccgaggatacgcatgacctggacgccggccaattcacgtgccgcaacggtg
ctggaaggagcgccggtggacaccttcctggctctggtgaccgtctctgatgcggattca
ggagacaacgggaaagtgaccgcagtcattcaggagggatcgggcccgttccgccttaaa
cggatccacggtgataactacatgatcgttaccgatgggaggttggatcgagaggatgtc
atgaaatataacatcacgctccgggcgatggattacggagctcccccgctgtcttgcgtc
gaacaccttcctgtctacgttctggacgagaacgacaactccccggcgttctccagctcc
gtctacaaggcctccttcaaggagaacaacgcggcgggtcaccacgctctcacggtagaa
gccgacgatgttgacctggagctcagcgggagagtttcctactccctgagcgcctctgtt
gaccaggaggctaaaacgcaatacttctccgttcacccgaaaactggcgtcatcagcgcc
cggcggccgctggactacgaggaatctcccagctactccttcatcgtgcaggccgtcgac
cacggacatccaccgctcacaagcacggccactgtgcagatcgacatcgaggacgtaaac
gacaactaccccaccatcaaggagccaaaaccgaggaagggcgtggcttctctgagcgta
cccgtcaacgcatacaagggggagattgtgaccgaactggggaacgaagtagaagaggcg
gtcaccactttgccgattaatccctcagccagagacggactcgttgggttcctagcgtcc
acgattaaagctgaagatctggactcgggactcaacggagatctccagtacttcatcacg
gatggaaacccgtacggactcttctggttggaccaaactaccggccagttgtttgtaaat
accaccaacgctacggagctcattgggaaaaccttcaaggtggacatcgctgtgtctgac
atgggaacgccaagcctgaccacaaaggccactctggatgtgaccttcatcaacctcaag
gaccacctgaagaactcgtcaccagggaaccgcgggcggctcagcttcaccatgatgatg
gcggtctgcctcggcgcgacatgcctgcttctgcttctggccatcgctttggtgacgacg
ttctgccgccccgagaaacgggacaaccgggcctacaactgcaggcaggccgaatcgagc
tacacccgccatcctcggcgccctcagaagaacatcaggaagtctgacatccagctgatt
cccgtcatccgggggcgaaaggaggagcccccccaggacgacgccgaggcccaaccgctg
actccgcctccggtgtcagaggaccaacaaaccgagaggcagtacaacttaataccgtca
gtgatgaacacgagcttccattcccaaggctacctggaggcggacgccactcaacccgcc
gcccatcactccagaacacttcgaaaacccggaaacatcgaactcgatggagctttgcct
ctgacgcccgccacgtcgtaccggactcttcgcaaatccagaaacccgtcgtcgtcttcc
tccaactcgcattcgagcacgttgaagcggcagattcatcccgacagagaagcagctgag
ctgccgcgttcggcgtctcaggcgacgctgcggaggccgaagacttcggacggacgagcg
acgcaggacgccgaccatcggcagatgcttcgtaacctggttcgtctgtccatggcggcg
ttcggagactccatcgagctgtcctcggcctccccagaggtccagcagatctcccagctc
ctgtcgctcctccatcagggtcagctgcagcccaggaccaacttccgcggaaacaaatac
tctcatcgaaacggccggtacggaggtcaggactgctccgactggcagagcaccaaagac
agcggacacggcgagagcgaagccggagacgtggactgggaaccgggacgagagtcgccc
gtcgacctgcagctggaagaaggactcaacaacctgttcaacaaccccgacgaggttttc
tcggaggtcagcgacccggcttggatggcccgactctccctcccgctcgccggagattac
cacgacaacgtcttcgtccccgacgggcccccgtcgcccgaaagcgaggttcttccccgg
agcggcctggactccacctcctcttcctccttctccaccttcggtaaaactccggagaag
gacggcccactgggcggagctctgctgtctgaggtcagcactctgttcgagatgctgatg
acgcagaaggccgacgcccaccccggcccccggcccgacgtcctgtaccgactctcggcg
gcgtaccgccgctccctgggcctggacgccgccggcagcgccaacacgaccgccgcaggc
aacgcaccaaagaactctgggaacacggagaagagggcggggccaactgcatcctcagga
ctttatcaatga
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integrated database retrieval system
