Embiotoca jacksoni (black perch): 138210611
Help
Entry
138210611 CDS
T10523
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03013
Nucleocytoplasmic transport
eja03015
mRNA surveillance pathway
eja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138210611 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
138210611 (acin1b)
03015 mRNA surveillance pathway
138210611 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138210611 (acin1b)
03041 Spliceosome [BR:
eja03041
]
138210611 (acin1b)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138210611 (acin1b)
Spliceosome [BR:
eja03041
]
Complex C
Other components
EJC/TREX
138210611 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
138210611
NCBI-ProteinID:
XP_069025964
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMCQNSFIKQYLAKQQELLRQRLEREAQQEEEADESPAVPEEDEDHSEDN
DSSSYVSDKRRAMSSQPSLARPEDRGAGQSVMGHGPGPTLHRQEAPEALGARMQRPTFHQ
GNQEPPAPSPPRAVASLSVRVLGQPDRQGLPPAVPRAQEKEGTAPSEPGSAHSVLHLSRS
AGASAAGQVNEDSDEGDDGDDESDDDEDWGPGPGGVRRGNRVPPPPQQMPPSVPSSSSAR
SKRKLQPPQHIPPPQVHHTPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDMDDQEGEGPPA
ARGPRAGSFPPLAMQRQDSDSSSRSSSPEPPVKRRPGPLSLLVHKMESERAFGAADATSA
AGGSGEATHSKAGSSIESPLQRLETKRQQENRLKEEKERERQQEQEEERRKTQEQERERK
RLEEEKEKERKLLEEERRREEKRLKEEQEKEKKRQEEEKRREEKRLKEEQERKQEAAKKG
RVVVTEAQDSGSSSDSDSKSDSSSRSSQSSSSSGDEKPPAKQMKKEDQGQDAEDVKKTNL
STGAEKRSLSKREVSEPSAAAVTEVEPGSESSMAQQPASGAEPESSEGRLEESTTPKAFA
ARKISLTSSKTSPAATDGGAGEEMGSAAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPD
IKVNQEAVVELHPEELQLSGDEENLDNNRGDPDKGLKIRRTVTQVVPGDSQENGQTNEEE
EEEEEEEEEEEEEEVEKPEREKQRRTSRDKRKNSVSEEASETQTSGSLDGEAKKVTPSDS
LVRRSISQQKSGVSVTIDDPVRTTKQPSPPRGKVSNIIHVTNLVRPFTLGQLKELLNRTG
SVVEEGFWIDKIKSHCFVTYATAEEAVETRAALHGVKWPPSNPKVLSVDFSEQDEMDFHK
GVLKPERVEEHVTQPGPPQNRLPPLMPERDRERERDREPERDRDRGVRDLWAEREREMER
RERARGEREWDRDKVREFARPGEDGERSRSRDRERRRRERAKSKERKTEKKEKADEPPAK
LLDDLFLKTKAAPCIYWLPLTEEQAAQRLVDRTERQKERERRRKEQQEEEEKKREEEKKE
RLKGREKDVGVATGGPAAGRGPDADRERDRGGRDREADKKRDGSHRPRRPSPGAAGGRRS
RSRSNPRDRRR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgagttgcggat
ctgaaagccgccctggagcaaagaaacctccccaaaagcgggcagaaaaacacactcatc
aagcgacttaaaggggctctgatgctggaaaacctgcagaagtcgtcctcctcccacagc
gggctgcagcccaactctcagatcggggaagagatgtgccagaacagcttcataaaacag
tacctggccaagcagcaggagctccttcgccagagactggagagagaggcgcagcaggag
gaagaggccgacgaaagcccagctgtaccagaggaggatgaagaccactcggaggacaac
gacagctcctcctacgtctctgacaagcgtcgagccatgtcgtcccagccctcactggcc
cggcccgaagatagaggagcaggacagtcggtgatgggtcacggccccggtcctaccctc
caccgccaagaagcccccgaggctctcggagctcggatgcagcgacccacctttcaccaa
ggaaaccaggagccacccgccccgtctcccccccgtgcagtcgcctccctgtcggtgcgt
gtcctggggcagcccgaccgccagggactgccccccgccgtgccccgagcccaggagaag
gagggcaccgcaccgagtgaacccggatccgctcattctgtcctccacctcagccgatct
gccggggcttctgctgcaggtcaagtaaacgaggacagcgacgaaggcgatgacggcgac
gatgagagcgacgacgacgaggattggggaccgggtcccggcggcgtacgaagggggaac
agagttcctcctccgccgcagcagatgccacccagtgtcccgtcatcatcgtctgcaaga
tccaaacgcaagctccagcctccgcagcacatcccaccaccgcaggtacaccacacaccc
atgcagctgcgccaccccactcctcctccctctccgcctcccaacctcttcccacttcct
gacactccaaagcagagtccaccagacatggacgaccaggagggagaaggcccaccggct
gcacgcggcccacgggcgggctctttcccacctctggccatgcagcggcaggactccgac
tccagctctcgttccagcagtcctgaaccgcccgtgaagcgccggccggggccgctctct
ctgctcgttcacaagatggagtccgagagggctttcggtgcagcggacgccacgtcagct
gccggcgggtcaggagaggcgacgcactccaaagccggctcatccattgaatcgccgctg
caaaggctggagacaaagaggcagcaggagaacagactgaaggaggagaaagagagagag
cgacagcaggagcaggaggaagaaagaaggaaaacacaggagcaggagagagagaggaaa
cgcctggaggaagagaaggaaaaggagcgaaagctgctggaagaggagaggagaagagag
gagaaacggctgaaggaggaacaagaaaaggagaagaaacgccaggaagaggagaagaga
agagaggagaaacgtctgaaggaggagcaggaaaggaagcaggaggcagccaagaaaggc
cgggtggtggtgactgaggcccaagattcaggctcctcgtcagattctgactccaaatca
gactcctcttcacggtcctcacaatcatcatcctcctctggggatgaaaagccacctgcc
aagcagatgaagaaggaggaccaaggacaagacgcagaagatgtgaaaaagactaacctg
agtacaggagcggaaaaacgatccctttcaaaaagggaggtgtctgagcccagtgcagcc
gctgtgacggaggtggaaccgggctctgagagctccatggcccagcagcccgcctccggg
gctgagccggagagcagcgagggtcgcctggaggagagcaccactcctaaggcttttgcc
gctcgcaagatatccctcaccagcagcaagacatctccagccgccacagatggaggagca
ggtgaagagatgggaagcgcagcggggaggaagaggcgatggggctccagcacggcagtc
accgctaagaaaccgtccatcagcatcaccaccgactcactgaagtctttgattccagac
atcaaagtgaaccaggaggctgtcgtggagcttcacccagaagagctgcagttgtcgggg
gatgaggagaacctggacaacaaccggggcgacccggacaaaggcctcaagatccgacgc
accgtcacacaggttgttccaggtgacagccaagaaaatggacagacaaatgaagaagaa
gaggaagaggaggaggaagaagaagaagaagaagaagaagaagtggagaaaccagagaga
gaaaaacaacgccggacctccagagacaaaaggaagaacagtgtgtctgaggaagcctcg
gaaacacagacgtctggcagcctggacggggaggccaagaaagtcacccccagcgacagc
ctggtgcgtcgctccatcagtcaacagaagtcaggcgtgtccgtcaccatcgacgacccc
gtccgcacgaccaagcagccgtcgccgcctcgtgggaaagtttcaaacatcatccacgtg
acaaacctggtgagacctttcaccctgggccagctgaaggagcttctgaaccggaccggc
agcgtcgtggaagaaggtttctggatcgacaagatcaagtctcactgcttcgtcacgtac
gcgacggcggaggaggcggtggagacccgggccgccctccacggggtcaaatggcctccg
agcaatcccaaggtgctcagcgtggacttcagtgagcaggacgagatggactttcacaaa
ggcgtcctgaagccagaaagggttgaggagcacgtgacccagccgggtcctcctcagaac
cggctgccccctctgatgcccgagagggaccgggagagagagcgggaccgggagcccgag
cgggaccgggaccggggcgttcgggacctgtgggcggagcgggagagagagatggagcgt
cgggaacgggcgcggggcgagcgggaatgggaccgggacaaggtccgggaattcgccaga
ccgggagaggacggcgaaagatccagatccagagacagagagaggaggaggagagagaga
gccaagagcaaggagaggaagaccgagaagaaggagaaagcagacgaacctccggccaaa
ctgctcgacgacttgttcctgaagaccaaagcggctccgtgtatctactggctccccctc
accgaggagcaggcggcgcagcggctggtcgaccgcacggagcgccagaaggagcgcgag
cgaaggcgcaaggagcagcaagaggaggaggagaagaagcgggaggaggagaagaaggag
aggctgaagggccgcgagaaggacgtcggcgtggcgacgggcggcccggcggccgggcga
ggacccgacgccgacagagagcgggaccgcggcggccgagacagagaggccgacaagaag
agggacggcagccaccggcccagacgaccctcgccgggcgcggcgggtggacggcggtct
cgtagtcgtagcaaccccagagaccgacgccgctga
DBGET
integrated database retrieval system
