Embiotoca jacksoni (black perch): 138210740
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Entry
138210740 CDS
T10523
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138210740 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138210740 (nup54)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138210740 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
138210740
NCBI-ProteinID:
XP_069026136
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MAFSFGGATSNTAASTSGFSFGSFGAKTAASTAFGFGPAAAAATASSGFGTLAAPGFGAA
ATTTAAPATGFSFGSTNTGFGGLGAGNTMAGGFSFGGFGLNANPAAVSFNVGCFGTATTT
GTVFNFGNSLASTGAFGGFGATTTTAAAPGSTFSFAAPANTAGGLFGNAQNKGFGFSSGL
GTGAAAGTSGFGTGLGTTGLGGFGGFNIQPTQQQQGGLFGQQAQQQGQTQPTHLYQQVTA
LSAPTLLGDERDTILAKWNQLQAYWGTGKGYYSNNNPPVDFTQENPFCRFKAVGYSCVPM
SKDEDGLVVLVLIKKEAEVRAQQQHLVESLHKVLGSNQTLTVNVDGVKALPNDQTEVIIY
VVERSPNGTSKRIPATTLFGYLEQANVKLQLAQIGVTMSVTRTELSPAQLKQLLQNAPAG
VDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMNKQHQTRVDIISNDISELQK
NQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNA
PTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQQQDGLSHLISVIKD
DLEDIKLIEHGLSDSGHMRGGILS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgctacgagtaacacggcggcaagcacgtccgggttttcc
tttggttcatttggtgccaagaccgcggcatcaacagcgtttggcttcggccccgcagcc
gccgccgccactgcctcctccggattcggcactcttgcagcccccggttttggggcagcc
gccaccaccactgctgcaccagccacaggatttagcttcggctccaccaacactggattt
ggggggctaggagctggaaacaccatggctggtgggtttagttttggggggttcggttta
aatgccaacccagcagcagtcagctttaatgtggggtgctttggtacagcaaccaccact
ggcactgttttcaattttggtaatagcctggctagcacaggtgcatttggtggttttgga
gcaacaacaacaactgctgctgcgccggggtccacttttagctttgctgccccagccaac
accgcaggcggcctgtttggtaacgcgcagaacaaagggtttgggttctcgtctgggctc
ggcaccggggccgccgctgggacgtcgggatttggaaccggattaggaacaactggcctg
ggtggtttcggaggctttaatatccagccaactcagcaacagcaaggaggcttgttcggc
cagcaggcccagcagcagggacagactcagcccacccacctttaccagcaggtcactgct
ctgtcagctcccaccttgttaggagatgagcgcgacaccatcctcgccaaatggaaccaa
ctccaggcttactggggcaccgggaagggctactacagcaacaacaacccacctgtggac
ttcacacaggagaacccgttctgccggttcaaggcggtgggttacagctgcgttccaatg
agcaaggatgaggatggtttagtggtcttggttctcatcaaaaaggaagctgaagtgcga
gctcagcagcagcatctggttgagtcgctccacaaagtcctggggagcaaccagacactc
accgtcaatgtagacggtgtcaaagccctgccaaacgaccagacagaggtgatcatttat
gtggtggagcgttctcctaatggcacctccaagcggatcccggctaccacactcttcggc
tatctggagcaggctaacgttaagctccagctcgcccagatcggagtgaccatgtcagtc
acgcgcacagagctgtctccagcgcagctcaaacagctgctgcaaaatgctcccgccgga
gtggatcccatcatttgggagcaggctaaggtggacaatcctgacccagagaagttaatc
ccagtgcccatggtggggtttaaagagctgctccgcaggctgcagatccaggagcagatg
aataaacagcaccagaccagagtggatattatctccaatgacatcagtgaactgcagaag
aaccaggcgaccacggtggccaagatcgcccagtacaagaggaagctgatggatctttct
cacagggtgctgcaggtgctgatcaaacaggagattcaaaggaaaagtggatatgccatc
caagtagatgaggagcatctcagagtgcagctggacaccattcagtctgaactcaatgcc
cccacacagttcaagggtcggttgaatgaattaatgtctcaaatccggatgcagaaccac
tttggagctgtgagatcagaggagcgctacagtgtcgatgcagaccttctcagagaaatc
aaacaacacttgaaacagcagcaggatggtttaagtcatttgatcagcgtcatcaaagac
gacttggaagacatcaaactcatagagcatgggctgagcgacagcggacacatgagagga
ggcatcctgagctga
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