KEGG   Embiotoca jacksoni (black perch): 138210740
Entry
138210740         CDS       T10523                                 
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
eja  Embiotoca jacksoni (black perch)
Pathway
eja03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:eja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    138210740 (nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eja03019]
    138210740 (nup54)
Messenger RNA biogenesis [BR:eja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     138210740 (nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C
Other DBs
NCBI-GeneID: 138210740
NCBI-ProteinID: XP_069026136
LinkDB
Position
Unknown
AA seq 624 aa
MAFSFGGATSNTAASTSGFSFGSFGAKTAASTAFGFGPAAAAATASSGFGTLAAPGFGAA
ATTTAAPATGFSFGSTNTGFGGLGAGNTMAGGFSFGGFGLNANPAAVSFNVGCFGTATTT
GTVFNFGNSLASTGAFGGFGATTTTAAAPGSTFSFAAPANTAGGLFGNAQNKGFGFSSGL
GTGAAAGTSGFGTGLGTTGLGGFGGFNIQPTQQQQGGLFGQQAQQQGQTQPTHLYQQVTA
LSAPTLLGDERDTILAKWNQLQAYWGTGKGYYSNNNPPVDFTQENPFCRFKAVGYSCVPM
SKDEDGLVVLVLIKKEAEVRAQQQHLVESLHKVLGSNQTLTVNVDGVKALPNDQTEVIIY
VVERSPNGTSKRIPATTLFGYLEQANVKLQLAQIGVTMSVTRTELSPAQLKQLLQNAPAG
VDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMNKQHQTRVDIISNDISELQK
NQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNA
PTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQQQDGLSHLISVIKD
DLEDIKLIEHGLSDSGHMRGGILS
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggcgttcagttttggcggcgctacgagtaacacggcggcaagcacgtccgggttttcc
tttggttcatttggtgccaagaccgcggcatcaacagcgtttggcttcggccccgcagcc
gccgccgccactgcctcctccggattcggcactcttgcagcccccggttttggggcagcc
gccaccaccactgctgcaccagccacaggatttagcttcggctccaccaacactggattt
ggggggctaggagctggaaacaccatggctggtgggtttagttttggggggttcggttta
aatgccaacccagcagcagtcagctttaatgtggggtgctttggtacagcaaccaccact
ggcactgttttcaattttggtaatagcctggctagcacaggtgcatttggtggttttgga
gcaacaacaacaactgctgctgcgccggggtccacttttagctttgctgccccagccaac
accgcaggcggcctgtttggtaacgcgcagaacaaagggtttgggttctcgtctgggctc
ggcaccggggccgccgctgggacgtcgggatttggaaccggattaggaacaactggcctg
ggtggtttcggaggctttaatatccagccaactcagcaacagcaaggaggcttgttcggc
cagcaggcccagcagcagggacagactcagcccacccacctttaccagcaggtcactgct
ctgtcagctcccaccttgttaggagatgagcgcgacaccatcctcgccaaatggaaccaa
ctccaggcttactggggcaccgggaagggctactacagcaacaacaacccacctgtggac
ttcacacaggagaacccgttctgccggttcaaggcggtgggttacagctgcgttccaatg
agcaaggatgaggatggtttagtggtcttggttctcatcaaaaaggaagctgaagtgcga
gctcagcagcagcatctggttgagtcgctccacaaagtcctggggagcaaccagacactc
accgtcaatgtagacggtgtcaaagccctgccaaacgaccagacagaggtgatcatttat
gtggtggagcgttctcctaatggcacctccaagcggatcccggctaccacactcttcggc
tatctggagcaggctaacgttaagctccagctcgcccagatcggagtgaccatgtcagtc
acgcgcacagagctgtctccagcgcagctcaaacagctgctgcaaaatgctcccgccgga
gtggatcccatcatttgggagcaggctaaggtggacaatcctgacccagagaagttaatc
ccagtgcccatggtggggtttaaagagctgctccgcaggctgcagatccaggagcagatg
aataaacagcaccagaccagagtggatattatctccaatgacatcagtgaactgcagaag
aaccaggcgaccacggtggccaagatcgcccagtacaagaggaagctgatggatctttct
cacagggtgctgcaggtgctgatcaaacaggagattcaaaggaaaagtggatatgccatc
caagtagatgaggagcatctcagagtgcagctggacaccattcagtctgaactcaatgcc
cccacacagttcaagggtcggttgaatgaattaatgtctcaaatccggatgcagaaccac
tttggagctgtgagatcagaggagcgctacagtgtcgatgcagaccttctcagagaaatc
aaacaacacttgaaacagcagcaggatggtttaagtcatttgatcagcgtcatcaaagac
gacttggaagacatcaaactcatagagcatgggctgagcgacagcggacacatgagagga
ggcatcctgagctga

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