Embiotoca jacksoni (black perch): 138210854
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Entry
138210854 CDS
T10523
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1 isoform X1
KO
K05635
laminin, gamma 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04510
Focal adhesion
eja04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138210854 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138210854 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
Crescentin
DUF6061
Alanine_zipper
Sec63
Motif
Other DBs
NCBI-GeneID:
138210854
NCBI-ProteinID:
XP_069026294
LinkDB
All DBs
Position
Unknown
AA seq
1687 aa
AA seq
DB search
MPSLIRALVAWCWVAAAVRVHAAMDECSDERGRPQRCMPEFVNAAFNVTVVATNTCGSPP
EEYCVQTGATGVTKSCHICDVRDPRNHHSAAYLTDYNNQQDTTWWQSQTMLAGIQYPNTI
NLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREGGAWTPYQYYSGSCEKTYQKAGLGF
IRTGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDLSPVLQDWVTATDIRVTL
NRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECAKDSRGRLVCNCKHNTDG
DDCDACKPFFNDRPWRRATADNPNECLACDCNGKSSECYFNAELYRATGHGGHCRNCADN
TDGPNCERCLDNYHRDQSGNRCLPCGCNGVGSESPQCDNRGVCACKPGVTGEKCDRCQPG
YHSLTEAGCRLCSCSPSGSTQECDVNTGQCRCKDHVEGFSCDRCKLGYFNLDPNNPQGCT
PCFCFQHSSVCDSAEGFSVHAVSSSFYGDDEGWTAQQHDGSSVRVQWSPSGQEISLISDD
YFPMYFVAPGTHTHTHTQTHTHTHVSMFVSLFKKKKKKKKKKKKVGVASGSAFLHPDFCF
HCDSTTFPSLWCFNIFFFYLLVCLFVVFSTPAAPLGFCVAEKFLGNHMLSYGQNLTLNFR
VDRRDTRLSAEDLVLEGAGLRVAVPLIAQGNAYPNENMQTYVFRLHDSTDYPWRPSITHS
DFQKLLHNLTAIKIRGTYSERSAGYLDDVSLVTARRGPGVPARWVEQCTCPQGYQGQHCE
QCTLGYRRARPELAAFSPCEPCNCNGHSDACNADTGACDCLHNTAGLSCERCKDGFYGDV
AQGTSGDCQPCPCPSGATCAVVPKTKEVVCTNCPTGTTGKRCELCDDGFFGDPLGQNGPV
RACRACKCSDNIDPNAVGNCDRETGECLKCIYNTDGFFCDRCKEGFYGNALATNPSDKCK
SCSCSPLGTLGRHTGCSQVTGQCVCLPNVAERDCSACQPGFFNLQSGNGCERCNCNPIGS
TNGQCDIASGQCECQPGVTGRHCERCEVNFFGFGSSGCKPCDCDPEGSQSGQCKEDGRCE
CRPGFVGTRCDMCEENYFNNRSAPGCQQCPSCYGLVRDKVNQQRQKLHDLQTLIDNLGSG
DDTISDKAFEDRLKEAEKAIMELLEEAQTSKDVDKGLLDRLNNINNTLTTQWNRLQSIRN
TVDDTGTQADRARGRVRDAESLIDSARQELDNAKEAIGKVNIKPSGGIGEPNNMTLLAEE
ARKLADKHKMDADQIEKIAKDANDTSTKAYNLLLKTLDGENKTSQEIDELNKKYNEAKEL
AKNLEKQANKVQAEAEDAGNKALKIFANLTSLPPFDTKALEDEANKIKKEASDLDKLIDK
TEKEYNDLREDLKPKEQEVRKLLEKGKSEQQTADQLLARADAAKAVAEEAAKKGQSTFKE
AKNILDDLRDFDRRVNDNKTAAEEALKKIPAINATIMAANEKTKQAEAALGNAASDAREA
KKKAEDAEKIASYVQKESAKTKEDAEKALRDTNKLDDDVGNMMDQLSAAERELARKKAEA
DQDMMMAGMASDNAKEAEDNARKAKSTVKTVLKIITSLMDQLGNIDKVDLSKLNQIDESL
KRAKGKMADSDLDRKLTELNDVARTQEDMINDYDRQIREIRADIANLNDIKNTLPEGCFN
TPSLERP
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtttgatccgggctctggtcgcttggtgctgggtggcggcggcggtgcgtgtc
cacgctgccatggacgagtgttcggacgagcggggccgaccgcagcggtgcatgcccgag
ttcgtgaacgccgcttttaacgtcacggtggtggcgaccaacacctgtggctctccgccc
gaggagtactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgac
gtccgggacccccggaaccaccacagcgccgcgtacctgaccgactacaacaaccagcag
gacaccacctggtggcagagccagaccatgctggcgggcatccagtacccgaacaccatc
aacctcaccctgcacctcggtaaggccttcgacatcacctacgtgcggctcaagttccac
accagccggccggagagcttcgccatctacaagcggacgagggaaggcggcgcctggacg
ccgtaccagtactacagcggctcctgcgagaagacgtaccagaaggcgggcctcggcttc
atccgcaccggcgaggacgagcagcaggcgctctgcaccgacgacttcagcgacatctcg
ccgctcaccggcggaaacgtggccttctccacgctggaggggcgacccagcgcctacaac
ttcgacctcagccccgtgctgcaggactgggtgacggccacagacatccgagtgaccctg
aacaggctcaacacgttcggggacgaggttttcaacgaccccaaggtcctcaagtcctac
tactacgccatctccgacttcgcggtgggaggaaggtgcaagtgcaacggccacgccagc
gagtgcgcgaaggacagccgaggtcgtctggtgtgcaactgcaagcacaacaccgacggc
gacgactgcgacgcgtgcaaacctttcttcaacgaccggccgtggaggagagcgacggcc
gacaaccccaacgagtgtctggcctgcgattgtaacgggaagagctccgagtgttacttc
aacgccgagttgtaccgggccaccggtcacggaggtcactgcaggaactgcgccgacaac
accgacgggcccaactgcgagcgttgccttgacaactaccaccgggaccagagcggcaac
cgctgcctgccctgcggctgcaacggcgtcggctcagagtctcctcagtgcgacaacaga
ggcgtgtgtgcttgtaaacccggagtgaccggagagaagtgtgaccgctgccagccggga
taccacagcctgaccgaggccggctgcaggctgtgttcttgctcgccctccggcagcact
caggagtgcgacgtcaacacgggacagtgccgctgcaaagaccacgtggagggcttcagc
tgcgacaggtgtaaactgggttacttcaacctggaccccaacaaccctcagggctgcacg
ccctgcttctgcttccagcactcgtcggtgtgcgacagcgccgaaggcttcagcgtgcac
gccgtcagctcctccttctacggagatgacgaggggtggaccgcccagcagcacgatggg
tccagcgtccgtgtccagtggtctcccagcggacaggaaatctccctcatctcagacgac
tacttccccatgtacttcgtagccccgggtacacacacacacacacacacacagacacac
acacacacacacgtttctatgtttgtaagcttgttcaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaagtgggcgtggcctcagggagtgcgtttttacatccagatttctgtttt
cattgtgactctacgacttttccttctctttggtgttttaacattttctttttttattta
cttgtttgtttgtttgttgttttctcaacccctgccgctcctctcgggttttgcgtcgca
gagaagtttttggggaaccacatgctgagctacggacagaacctgaccctgaacttccga
gtggaccggcgggacactcgcctgtcggccgaggatctggttctggagggagccggcctg
cgggtggccgtccccctcatcgcccagggcaacgcctaccccaacgagaacatgcagacc
tacgtgttccggctccacgacagcaccgactacccctggaggccgtccatcactcactcc
gacttccagaaacttctccacaacctgacggccatcaagatccgcggcacctacagcgag
aggagtgccggttacctggacgacgtctccctggtgacggcgaggcggggccccggcgtg
ccggcccgctgggtggagcagtgcacctgtcctcagggttaccagggtcagcactgtgag
cagtgcactctgggataccgccgcgcccgccccgagctcgcggccttcagcccctgtgaa
ccctgcaactgcaacggacacagcgacgcctgcaacgcggacactggagcgtgtgactgt
ctgcacaacacggccggtttgagctgcgagcgctgcaaagacggtttctatggcgacgtc
gcacaggggacgtcaggcgactgtcagccatgtccctgtccgtccggagccacctgcgcc
gtcgtccccaaaactaaagaggtggtgtgcaccaactgtcctactggaaccacaggcaag
cgctgcgagctctgcgacgacggcttcttcggcgacccgctgggtcagaacgggccggtc
cgggcctgccgcgcctgcaagtgcagcgacaacatcgaccccaacgccgtcggcaactgc
gaccgcgagaccggcgagtgcctcaagtgcatctacaacaccgacggcttcttctgcgac
cgctgcaaggagggtttctacggcaacgccctggccaccaacccctccgacaagtgcaaa
tcctgctcctgctctcctctgggcacgctgggccgacacaccggctgctctcaggtcacc
ggtcaatgcgtgtgtctccccaacgtcgccgagcgcgactgcagcgcctgccagcccggc
ttcttcaacctgcagagcggcaacggctgcgaacggtgtaactgtaatcccatcggctcc
accaacggtcagtgcgacatcgcctcgggtcagtgcgagtgtcagcccggcgtcaccggc
cggcactgcgagcgctgcgaggtcaacttcttcggcttcggctcgtccggatgcaaaccc
tgcgactgcgaccccgaaggctcccagtcgggtcagtgcaaggaggacggtcgctgcgag
tgtcggcccggcttcgtcggaactcggtgcgacatgtgcgaggagaactacttcaacaac
cgctcggcgccgggctgccagcagtgtccctcctgctacggtctggtccgcgacaaggtg
aaccagcagaggcagaagctgcacgacctgcagaccctgatcgataacctcggctcgggc
gacgacacgatcagcgacaaggccttcgaggaccgtctgaaggaggctgagaaagccatc
atggagctgctggaggaggctcagaccagcaaagacgtggacaaaggtctgctggaccgc
ctgaacaacatcaacaacactctgaccacccagtggaaccggctgcagagcatccgcaac
acggtggacgacaccggcactcaggccgaccgcgcccgcggccgggtccgcgacgccgag
agcctgatcgacagcgcccggcaggagctcgacaacgccaaggaagccatcggcaaagtg
aacatcaaaccctccggcggcatcggggagcccaacaacatgacgctgctggccgaggag
gcgcggaagctggccgacaagcacaagatggacgccgaccagatcgagaagatcgccaaa
gacgccaacgacacgtcgaccaaagcgtacaacctgctgctgaagactctggacggagag
aacaagacgagccaggagatcgacgagctcaacaagaagtacaacgaggcgaaggagctg
gcgaagaatctggagaaacaggccaacaaggtccaggccgaggccgaagacgccgggaac
aaagctctgaagatcttcgccaacctgaccagcctcccgccgttcgacaccaaggccctc
gaggacgaagccaacaagatcaagaaagaggcgtcggacctcgacaagctcatcgataag
acggagaaggagtacaacgacctcagggaagacctgaagcccaaagagcaggaggtccgc
aaactgctggagaaaggaaaaagcgagcagcagactgcagatcagctgttggctcgagcc
gacgctgccaaagctgtggccgaggaggcggcgaagaagggccagtcgactttcaaggag
gccaagaacatcctggacgacctccgagacttcgacaggagggtcaacgacaacaagacg
gccgcggaggaggcgctaaagaagatccccgccatcaacgccaccatcatggccgccaac
gagaagaccaagcaggcggaggcggcgctcgggaacgccgcctccgacgcgcgggaggcc
aagaaaaaggcggaggacgccgagaagatcgccagctacgtgcagaaggaatccgccaag
accaaggaggacgcggagaaggccctccgggacaccaacaagctggacgacgacgtcggc
aacatgatggaccagctgagcgccgccgagcgggagctggcccggaagaaggccgaggcc
gaccaggacatgatgatggccgggatggcgtcggacaacgccaaggaggcggaggacaac
gcccgcaaggccaagagcaccgtgaagacggtcctgaagatcatcacgtccctgatggac
cagctgggaaacatcgacaaggtggacctgagcaagctgaaccagatcgacgagtcgctg
aagagggccaagggcaagatggccgacagcgatctggacaggaagctgacggagctgaac
gacgtggcgcggactcaggaggacatgatcaacgactacgaccggcagatccgcgagatc
cgcgccgacatcgccaacctcaacgacatcaagaacacgctacccgagggctgctttaac
acgccgtccctggagaggccttag
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integrated database retrieval system
