Embiotoca jacksoni (black perch): 138210900
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Entry
138210900 CDS
T10523
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja02010
ABC transporters
eja04148
Efferocytosis
Brite
Transporters [BR:
eja02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138210900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
138210900
NCBI-ProteinID:
XP_069026372
LinkDB
All DBs
Position
Unknown
AA seq
2249 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVELVWPLFLFFILVWVRSTNQPIYKGQCHYPNKA
MPSAGVLPWLQGMICNLDNPCLNHPTPGETPGQANNFNNSIIAGMLIELQTVLVNKSLLS
KAKMLADDVDQWASIMSQSNPGNAQPVILKSILRDDETFSKHLVEDLSLTSATVESLMNA
GIQLNPMMGIPRPGNLRSILCEGTDLDEHVQFSSQAEKEAFQNVSCSLTPQQLINTQRVL
LQNLDARKALSEVPSALNMNAADTATLINKTTQDALPVITEVTRLRNSMIFKAASSLDFQ
EDMIGSINRLLCGKQPDFNSTNMTLSLPSPMQMANNKSISIMGNSSDAFCQTLVDTLEGT
PGLRSIWSTFKPLLQGKVLYTPDSPAARLLVKEANSTFNSLAMLKELADSWDELGPKVRD
FLQNSTQVNTMRALLANPVFAALLNQRLSGTGWTAKLLANFLYNGPPEDRPPSMPAYDWR
GVYNAATQILKLLSKFLGCLDLNKFEAAPSEVQLVNKALEHLKNDTFWASVIFENLQPNS
SHPPPYVKYKIRMDIDEAERTNKVKETFWSPGARDNSFNDLRYIWGGFAYLQDMMDHGII
RVQTSKTQPLGVFAQQMPYPCYVDDVFVQSVGGMLPMFLVLAFMYTVCMTIKDLVLEKEL
RLKEVLRAVGIQNGALWSARFTENIVLFTVPCVLLSVMIKYGQVLQYSDPSVIFVFLLVF
CLATTTQCFFISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVMAFQAKVGVSLLSCV
AFGYGCESFSKYEEQGIGIQWHNIGKSPEEGDRYTFSVSIAMMLLDAAIYWVLTWYIENV
FPGQYGIPQPWYFPFTKSYWCGTASVTGGNPGMLKDSSVQNEYLEKPPPDMRAGVSIRNL
VKIYKTGKKLAVDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTAILNGHDI
RTDMYSIRKYLGMCPQHNVLFDQLTVEEHIYFYARLKGRSRSEVQTEMDQLIEDVGLPHK
RKDLAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTII
LSTHHMDEADILGDRIAIISHGKMRCCGSSLFLKKCFGSGYYLTLVRDGSEKMTAQRKGI
LRSQAKKEQTTDCPLSSSPDDGIGSQSWSNSDPSDLTAVGQLVRCHVPEALFLESIGREI
TYILPYGGAKDGTFATLFQELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIPPA
KELVVRDSKRRSRKSKRNSISSIHTKSEPIIGMTELKEKFTSKVEDLQQNASVSGMGSVV
ITGWRLIRRQFLALFIKRFHHARRSRKGLIAQVILPAVFVCLSLIFSLIIPPFTEYPSLE
LQLWMYGLPQTTFYSNDGPENTEVSRVVETLVNDPGFGTRCMNGDPIPNLPCSSSGSDWF
TPPVDQSVADIFLNGNWSMSNPSPACQCSTPKRAIMLPDCPPGAGGLPPPQRIQNTTDTM
LDLTGRNVTDFLLKTFEDSGKTRYGGISVGAINSQVRMTEAQIEAAFKDLRDLFSSFQDN
VTDQTFQKAEVLLKNIGTRDNVKVWFYNQAWHGMVSFLGVANNGILRGNLPAGRDPRQYG
ISVSNHPLNLTKAQLSYVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKSKHLQ
FVSGVNPAVYWLANFAWDMCNYIIPCLIVIVIFLCFQPQAYVSPSNLPALILLLILYGWS
ITPMMYPASFIFSVPSTAYVVLTCTNLFIGINGSMATFVMELLDDDKISRINDIVKQVLL
IFPHFCLGRGLIDMAKNQAMATLFSSFGEDRFKDPLSWEMVGKNLCAMSIQGVVMFAITI
LIQYKFFCKPRLISGKSSSAEEEDVDVARERERVCEGNAQNDLLWIRDLTKVYSRKSTPA
VDRLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQNM
GYCPQFDAINDLLTGQEHLEFYARLRGVPEKEVTMVAEWGIQKLGLVKYSSKSAGTYSGG
NKRKLSTAMALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECE
ALCTRMAIMVNGRFKCLGSIQHLKNRFGDGYTVIVRVGGSPPALKPVEDFVLQNFPGSIL
KEKHHNTLQYQLPHAQGALANIFSQFTIHQQGLGVEDYSVSQTTLDQVFVNFARQQHGQD
DSRACDNPVDISDELPLECVKTIQEAQKV
NT seq
6750 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgagctagtgtggcccctgttcctcttcttcatccttgtg
tgggtgcgatcgaccaatcagccaatttacaaaggccaatgtcactacccaaataaagcg
atgccatcggcgggcgtgctgccctggcttcaaggtatgatctgtaacctggacaacccc
tgtttgaaccatccaacgccgggggagactccaggacaagccaataacttcaacaactcc
ataattgcggggatgctgattgagcttcaaactgtcctggtgaacaaatctcttctcagc
aaggccaagatgctagcagatgatgtcgaccagtgggcctcaataatgtcacagtccaac
cctggaaatgctcaacccgtcatcctgaagagtattctaagagacgacgagaccttctcc
aaacacctggtggaggatttgtccttgacatctgcgaccgtcgagagcctcatgaatgct
gggattcagctcaatccaatgatgggcatcccgaggcccggcaacctgcggagcatcctg
tgtgaggggacagatctggatgagcatgtccaatttagcagccaagctgaaaaggaggca
tttcaaaatgtcagctgctccctcactccacagcagctgattaacacccagcgagtactc
ctgcaaaacctggacgcgagaaaagcactttctgaggtaccttcagctttgaacatgaac
gcagcagacacagcgacactgataaataaaaccacccaagatgcattgccagtgattaca
gaggtgaccaggttgaggaactcaatgatctttaaggctgccagttcgctggatttccag
gaagacatgattggcagtatcaataggctgctctgtggaaagcagcccgacttcaattcc
accaatatgaccctcagtttaccctcacccatgcagatggctaacaacaagtcaatttcc
attatgggcaacagttccgatgctttttgtcagactctcgtcgacaccctggagggcaca
cctggtctccgctccatttggagcaccttcaagccattattgcaagggaaagtcctctac
acacctgattcacctgctgctcgcctcttggtgaaagaagcaaatagcacattcaacagc
ttggccatgttaaaagagctcgctgattcgtgggatgaactcgggccaaaggtccgggat
ttcctacaaaacagcactcaagtcaacacaatgcgggctttgctggcgaatcctgtgttt
gctgctctcctcaaccagcgtctcagcggcacaggatggacggccaagctgctggccaac
ttcctgtacaacggccctccagaagatcgtcctcccagcatgccagcctatgactggcgg
ggtgtttacaacgccgctacccaaatcctgaagcttctctccaaattcctcggttgtttg
gacctcaataagtttgaggcagcccccagtgaagtccagctggtgaacaaagccttggag
catctgaaaaacgatacgttctgggccagtgttatttttgaaaatctccagccgaactcc
agccacccccctccttatgtcaagtacaaaatccgcatggacatcgacgaagcagagcgc
accaacaaagtcaaagaaacgttttggtctcccggagctcgagacaactcctttaacgac
ctgcgctatatatggggaggcttcgcctacctgcaggatatgatggaccacggcattata
cgagtgcaaacatcaaagacccaaccgctgggcgtttttgcccagcaaatgccgtatccg
tgctacgtggatgatgtcttcgtacagagcgttggcggcatgctccccatgttcctggtg
ctggccttcatgtacaccgtgtgcatgaccatcaaagacctggtgctggagaaggaactc
cggctgaaggaggtgctgcgcgctgttggcattcagaacggcgccctctggtcggcaagg
ttcacagagaacatagttctgttcacagttccatgcgtgcttttaagtgtcatgattaag
tatggccaagtcctgcaatacagcgacccctccgtaatcttcgtcttcctgctggtgttc
tgcctggccaccaccactcagtgcttcttcattagcgtcttcttctcgaaggccaactta
gcagcggcgtgcggtggcctcatctactttgtcctctacctgccgcatctcctctgctat
gcctggagggacgtcatggctttccaggccaaggttggcgtgagtttattgtcatgcgtg
gccttcggctacggctgtgagagcttctccaagtacgaggagcaaggcatcggcattcag
tggcacaacatcggcaagagtccagaggagggcgaccgctacaccttcagcgtgtccatc
gccatgatgctccttgatgctgctatatactgggtgctcacctggtacattgaaaatgtc
tttccaggccaatatggaatcccacagccgtggtacttccctttcacgaagtcttattgg
tgtggaacagcatcagtgactggtggtaaccccggcatgctgaaagactccagcgtgcaa
aacgaatatttggagaagccaccacctgatatgagagcgggcgtctccatccgtaatctt
gtcaaaatctacaagactgggaagaagctggctgtggacggactgagcatggacttctac
gagaatcagatcacatcatttctcggccacaatggagctggaaaaacaaccaccatgtca
attctgacgggattgttcccgcctacatcaggaacagccatcctcaatggacatgacatc
cgcactgacatgtacagcatccggaagtacttgggaatgtgtccacagcataatgtctta
ttcgatcagctgacagtggaggagcacatttacttctacgcccggctgaaaggccgcagt
cgcagcgaggttcaaactgagatggaccagttgattgaggatgtcggtttaccacacaag
cggaaggatcttgctaagaacctgtcaggtggcatgcagagaaagctgtcggtggccatc
gccttcgtcggtggatcaaaaatcgtcatcttagacgaacctaccgcaggagtggacccc
tatgcccgcagggggatctgggaactgctgttaaaatacaaacaaggtcggacaatcatt
ctgtccacacaccacatggatgaggcagacatcttaggcgatcgcatcgccataatctct
catggaaagatgcgctgctgcggctcctcactcttcctgaagaaatgtttcggcagcggc
tactacctcactttggtcagagatgggtctgaaaagatgacagctcagcgcaaaggtatc
ctgcgcagtcaggccaaaaaggaacaaacaacagactgtcctttgagcagcagcccagac
gacggcatcggcagccaaagctggagcaactctgatccctcagatttaacagctgtgggt
caactggtgcgctgccacgttcctgaggcgctcttcttggagagcatcggtcgggagatc
acctacatcctgccctacggtggagccaaagatgggacctttgccacactcttccaagag
ctcgacctagccatggctgaccttggcctgaccagctatggcatctctgacaccacgctg
gaggagatttttcttaaagtggctgaagatacgggagtggatgcagaaataccaccagca
aaggagctggtggtgagagactccaaaagaagatcccgcaaatctaagaggaacagcatc
tccagcatccacacgaaatcagaaccaatcattgggatgactgaattaaaagaaaagttc
acaagtaaagtggaagacctgcagcagaacgccagtgtcagcgggatgggatcggtggtc
atcaccgggtggaggctgatcagaaggcagttcctggcgctctttatcaagcgcttccac
cacgcccgacggagccgcaagggactcattgcccaggtgatcttgcctgctgtttttgtg
tgcctgtctctgatcttctcgctcatcatcccgccattcactgaatatccgagtctggag
ctgcaactctggatgtacgggctgcctcaaaccaccttttacagcaatgatggcccagaa
aacacggaagtgtcccgggtggttgagaccttggtgaacgaccctggttttgggacgcgc
tgcatgaatggagaccccataccgaatttaccgtgttcctccagtggctccgattggttt
actccccccgtggatcagtcggtcgctgatatcttcctcaacgggaactggagcatgtct
aacccgtcccccgcctgtcagtgcagcactcctaaacgggccatcatgttacctgactgt
ccgcccggagccggaggtctccccccaccacagaggatacagaacacaacggacacaatg
ctggatttaactggacggaacgtgacggacttcttgctcaagacttttgaggactctgga
aaaacaaggtacggagggatctctgtcggtgcaatcaactcccaggtccgtatgacagaa
gcgcaaatcgaagctgcgttcaaggatctgagagaccttttcagttcatttcaggataat
gtgactgatcagacgttccagaaggccgaggtactgctgaagaatataggaaccagggac
aacgtcaaggtgtggttctacaaccaggcgtggcacggcatggtgtccttcctcggtgtg
gccaacaacggcatcctgagagggaatctgccggcgggacgggatccacgccagtatggc
atctccgtctccaatcaccccctcaacctcaccaaggcgcagctctcctatgtagccatg
gccacaacctcaactgacgtggtggtgtccatctgcgttatcttcgccatgtccttcatc
cccgccagctttgtcctcttcctcatccaagagagggtgaacaaatccaagcatctgcaa
tttgtcagtggagtaaacccagctgtctactggttggccaattttgcgtgggacatgtgt
aactacatcatcccctgcttgattgtgatcgtgatcttcctctgcttccaaccacaagcc
tatgtttccccttccaacctgcccgctttgattctgctcctgattttgtacgggtggtca
ataacccccatgatgtaccccgcctccttcatcttcagtgtgcccagcacagcttacgtg
gtgctgacctgcaccaacctcttcatcgggattaacggcagcatggccacctttgtcatg
gagctcttggatgatgataaaatatcccgcatcaacgacatagtgaagcaggtgttgctc
atattcccacatttctgtcttggcagagggcttattgacatggccaagaaccaggcgatg
gccacgctcttcagcagctttggagaggaccgcttcaaagacccactgagctgggaaatg
gtgggaaaaaacctctgtgccatgtccatccagggagtcgttatgtttgccatcacaatc
ctcatccagtataagttcttctgcaaaccaagacttatttcagggaagtcgtcgtctgca
gaggaagaggatgtggatgtcgcccgggaacgtgagcgggtgtgtgaaggcaatgcccag
aacgacctcctgtggatccgtgacctcactaaggtgtactctcggaagagcacccccgct
gtggacaggctatgtgtgggcgtacctgccgcagagtgtttcggcttgctgggaatcaac
ggtgctgggaaaaccaccacgttcaagatgctgacaggagacatcccagtctccggtgga
gaggccttcctaaatggatacagcatacggacagaaatgagggacgttcaccagaacatg
ggctactgtccccagttcgatgccattaatgacctgctgactggacaagagcatctggag
ttttacgcccggttacgaggggtaccagagaaagaagtcaccatggtggccgagtggggg
atccagaagttggggctcgtcaagtattccagcaagtcagcaggaacctacagcggtggg
aacaaacgcaaactctcgacagcgatggccctgatcggatgtcctccagtgattttcctg
gatgagccaaccaccgggatggaccccaaagcccgacgcttcctgtgggactgcatcctg
agtgtcatcaaagagggacgctcagtcattctcacatcacacagcatggaggagtgcgag
gcgctgtgcacgcgcatggccatcatggtgaacggtcgcttcaagtgtctcgggagcatc
cagcatctgaagaacagatttggggatggctacactgtgattgtgagggtcggtggctct
cctcccgctctgaagccagtcgaggacttcgtcctgcagaacttccccggcagcattctc
aaggagaagcatcacaacacgctgcagtatcaactcccgcacgcacaaggagctctggcc
aacatcttcagccagttcaccatccatcagcaggggctgggcgtggaggactactccgtg
tcccagaccactctcgatcaggtctttgtgaattttgcacggcagcagcacgggcaggac
gactctcgggcctgtgacaacccagtggacatttcagatgaactgccactggagtgtgtg
aagaccattcaagaagcacagaaagtataa
DBGET
integrated database retrieval system
