Embiotoca jacksoni (black perch): 138211032
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Entry
138211032 CDS
T10523
Symbol
vimr2
Name
(RefSeq) vimentin
KO
K05640
glial fibrillary acidic protein
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eja04131
]
138211032 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
eja04812
]
138211032 (vimr2)
Membrane trafficking [BR:
eja04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
138211032 (vimr2)
Cytoskeleton proteins [BR:
eja04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
138211032 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
KASH_CCD
ATG16
UPF0242
CENP-F_leu_zip
MMPL
DUF7278
CT398_CC
RolB_RolC
DUF7801
OVT1
YabA
Filament_head
DUF4337
Motif
Other DBs
NCBI-GeneID:
138211032
NCBI-ProteinID:
XP_069026686
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MAMLRVSSYRKLFEEQSWSRSGALSVQRPGPVRASARRAAVDECDCDKFDFVAAKTLNKE
GLNRFVQDRTIIAALNDRLARLVELAHFFEEENESLECQIIELEEKLQSRQASSSITSTV
AQPDYSLDAVVERLRRQRDEILCDTEELHKELEHLQKEYEMFAQQRIFIQQERQEVAEEV
DAVTAECLGLREQVAIYEEQLANMEAQHKTSVESLVEPDEGTSGAVALKFCSPDITRALN
IKEYYCQLADNLQYECGASSSAVVRRDDGKELEVGGTVGSTVKDLPEIKDASEMKMLISE
LEKELAELEKCNEELEDEVEMKKAAYVDEAAELKCTIDEMRQQETDFKAQMKEQCADYKE
LLSEKMAREMEIAAYRSLVEEEEGRLCCAACDLSLKIQTGLLDAPRHKD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctccgagtgtcttcttaccgcaagctgttcgaggaacagagctggagtcga
agtggagcgttgagtgtgcagcgtccaggaccggtacgggcctccgccaggagggcagcg
gttgacgagtgtgactgtgataagttcgacttcgtggctgctaagactctgaacaaggag
ggcctgaaccggtttgtccaggaccgcaccatcatcgctgccctcaacgaccgcctggcc
cggcttgttgaactggcccatttttttgaagaggagaatgagtcccttgagtgtcagatc
attgaactagaggagaagctgcaaagtcgacaagcctcctccagcatcacgtccactgtg
gcgcagcctgactacagtctggatgcagtggtggaaagactgcgcaggcagagggatgag
attctgtgtgacaccgaggagctgcacaaagagctcgaacatctgcaaaaagagtacgag
atgtttgcacagcagaggatcttcatccagcaggaacgacaggaggttgctgaggaagtg
gatgctgtgacagctgagtgtttggggctgagggagcaagtggctatctacgaggagcag
ctggccaacatggaggcccagcacaagacgtcggtggagagtctcgtggagccagatgaa
gggacttcgggagcagtggctcttaaattttgcagccctgacatcacgcgggccttgaat
ataaaggagtactactgccagctggctgacaacctccagtatgagtgtggtgcttcctcc
tctgctgtggtccgacgtgatgatggaaaggagctggaagtgggaggaactgttgggtca
acggtcaaagacttaccagagataaaggacgccagcgagatgaagatgctgatttcagag
ctggaaaaggagctcgctgagctcgagaagtgtaacgaggagctggaggacgaggttgaa
atgaagaaggctgcatatgtggacgaagctgctgagttgaagtgtactatagacgaaatg
aggcagcaggagaccgacttcaaagcacagatgaaggagcagtgtgcagactataaggag
ctgctcagtgagaagatggccagagagatggagatcgctgcgtacaggagtctggtggaa
gaagaggaggggaggctgtgctgtgctgcctgcgacttgagcctgaagattcagactggc
ttgctggatgctccccgacacaaggattag
DBGET
integrated database retrieval system
