Embiotoca jacksoni (black perch): 138211034
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Entry
138211034 CDS
T10523
Symbol
polr1a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03020
RNA polymerase
Brite
Enzymes [BR:
eja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138211034 (polr1a)
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138211034 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138211034
NCBI-ProteinID:
XP_069026690
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MLFGKEVPWRRLEGMSFGLYSPDEIRKLSVKAITNSRFLDAVGNVAPDSLYDLALGPADI
KEVCSTCCQDFNNCPGHLGHVELPLPVYNPLFFDKLYLLIRGSCLACHALTCPRAAMHLL
LSQLRLVDHGDMQQVYQVEQVLSQHLEENPKTTGDEIQRVLQEFTDAVVGGNTESSKNTR
QIKHLVAKKSSLINNFWKIHMKTRKCPHCKSSRSTVRREHNSKLIITMPSGGQTGGNTDA
HMMAGKRVYLTASTAREHITKVWETEGFFLKCLFSGLEESSASQDRDATFYSDLFFLELL
VVPPCRYRPINRLGDQMFTNGQTVNMQAVMKDCSTIRKLLALIAEEKNPPEAEAAEQTDQ
TFLSVIPGVTLTDKLYNTWIRLQSHVNIVFDSDMDKLISEKYPGIRQILEKKDGLFRKHM
MGKRVDYAARSVICPDMYIGTNEIGLPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHP
GASMVINEDGRKTILSATNFTQREAVAKQLLTPSPGPHKMTMKIVNRHIKNGDVLLLNRQ
PTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQNELSRAEAYTLVS
TDQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFSRDQYTELVFRGLTDRPGRVKLLPP
AVLKPQQLWTGKQVVSTLLLNVIPEKAVPLNLVGKSKIPSKAWIQVPPRAAPGYRPDSMC
DSQVLIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGKTSGKLLSCLAQLFTAYLQLYR
GFTLGVEDILVKPGANMRRKKIIQESLKIGTNTLRAAFNLPSNADQAEARGRWQDAHLDP
DQRDFSMADHKFKEVANQVNNDINKVCMPIGLHTSFPDNNLQLMVQSGAKGSTVNTMQIS
CLLGQIELEGRRPPLMPSGKFLPCFQPYDPAPGAGGFVSGRFLTGIKPQEFFFHCMAGRE
GLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQ
HRQFSFIEDNYEVIKRSQGLDEALARLDPQMASQHFTAIQRWKAKREVECPRRGMQPRFI
FTMKCTTDLXPFHLNSPSQLVKQWHSLDEGSRSKYTRKSSRCPEPSLGSLRPDVCFGSVS
ENFHHITEKYLQSRGSVSEDGVDSHSLRQLLHYKWQRSLCDPGEAVGLLAAQSIGEPSTQ
MTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNNRRALKKAKMLRKKL
ARVCLAEVLQKVDVVETLRIENHHKLRAFKVTFHFLPPERYCDDKLLSPQQILHYMETRF
FSLLLEAIKKRSAKLASIAVETRKATPRDKDNEGAADTAGVDDGEGGGEGEGEEEREIVD
DQGNEGDADASDAKRKNKQEEEVDYDSGEEDEDDDAEDKDDQGEAEEDTNAAEESQPESA
PKMKTNRRRAAVEMRVNSVLQSISSIERYEFDQQQELWCELDLVLPMSKVHFDLTSVLSA
LAQNAVVMETRGLTRCLLSETTTKTGEKETVLNTEGINMHEIFMYSDILDINRLYSNEVH
AMAKTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRHAITSNS
SPLQQMTFETSYKFLKQATMLGSHDQLASPSACLVVGTVVRGGTGLFELKQPLQ
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcggtaaagaggtgccgtggcggcggctggagggcatgtcgttcggcctgtac
tctcccgacgagatacggaagttgagtgtgaaggccatcacgaactccaggttcctggat
gctgttgggaacgtggccccggacagcctgtacgacctggccctgggcccggcagacatc
aaagaggtgtgttcgacctgctgtcaggacttcaacaactgcccgggacacctcggacat
gtggagttacctctacctgtatacaacccactgttctttgataaactctacttgctgatt
cgtggttcctgcctggcgtgtcacgccttaacatgtccccgcgccgccatgcacctgctg
ctgagccagctgaggttggtggaccacggagacatgcagcaggtctaccaggtcgaacag
gtcctcagtcagcacctggaagagaatcctaaaaccactggagatgagatacagcgggtc
cttcaggagtttacagatgcagtcgttggagggaacactgaaagttcaaagaacaccaga
cagatcaaacacctggtggcgaagaagagcagtctgataaacaacttctggaagattcac
atgaaaaccaggaagtgtcctcactgcaagagcagcaggtcgacggttcgtcgtgaacac
aacagcaagctgatcatcacgatgccgtcgggaggacaaaccggcggcaacaccgacgcc
catatgatggctggaaagagagtctacttgactgccagcaccgccagagagcacatcacc
aaagtgtgggagacagaaggtttcttcctgaagtgtctgttctctgggttggaagagagc
tcggcgtcccaggacagagacgcgactttctattcggacctcttcttcctggagctgctg
gttgtcccaccctgcagatatcgtccaatcaaccgcctcggtgaccagatgttcaccaac
ggtcagacggtcaacatgcaggcagtcatgaaggactgcagcaccatcagaaaacttctg
gctctcatcgcggaggagaagaaccctccggaggccgaggctgcagagcagacggaccag
acgttcctgtctgtaatccccggagtcacattaacggataaactctacaacacgtggatc
cgcctgcagagccacgtcaacatcgtcttcgacagcgacatggacaaactgatttcagag
aaataccccgggatccgacagatcctggagaagaaggacggattgttccggaaacacatg
atgggaaaacgggtggactacgccgctcggtccgtcatctgtccggacatgtacatcgga
accaatgagatcggattaccgatggtgttcgccaccaagctgacgtacccgcagcccgtc
acgccgtggaacgtgaaggagctgcgtcaggccgtcctcaacgggcccaacgtccacccc
ggcgcctccatggtgatcaacgaggacggcaggaaaaccatcctgtcggccaccaacttc
acgcagagggaagcggttgccaagcaactgctgacgccctccccgggtccacacaagatg
accatgaagatagtgaaccgtcacatcaagaacggagacgttctgttgctcaacagacag
ccgacgctgcaccgaccctccatacaagcccactgcgctcgcatcctgccgggagagaag
gtgctgcggctccattacgccaactgcaaggcgtacaacgctgacttcgacggggacgag
atgaacgcccacttccctcagaacgagctgagccgagcggaggcctacacgctggtgagc
accgaccagcagtacctcgtccccaaggatggaaaacctttagcgggtctgatccaggac
cacatggtgtcgggaacgaggatgacgatccgaggctgtttcttcagcagagaccagtac
accgagctggtgttcagagggctgacggaccgacccggcagagtgaagttactgccgccc
gccgtcctcaaaccgcagcagctctggaccgggaagcaggtggtatcgacgctgctgctc
aacgtcatcccagagaaagctgttcctctgaacctggtgggaaagtcaaagatccccagc
aaggcgtggatccaagtccctccgcgagccgctccggggtaccgacccgacagcatgtgt
gactcacaggtgctgatccgtcagggagagctgttggtgggcgttctggacaaagcccac
tacgggtcctcggcctacggtctggtgcactgctgctacgagctgtacggagggaagacc
agcggaaaactgctcagctgcctggctcaactcttcacggcctacctgcagctgtacaga
ggcttcactctgggtgtggaggacatcctggtgaaaccgggcgccaacatgcggaggaaa
aaaatcattcaggaatcactgaagatcggcaccaacaccctccgggctgcctttaacctg
ccctccaatgcagatcaagctgaggctcggggccgctggcaggacgcccacctcgaccca
gaccagagagacttcagtatggctgaccacaagttcaaggaggtggccaaccaggtcaac
aatgacatcaacaaggtgtgtatgcccatcggactgcacacctccttcccagacaataac
cttcaactgatggtccaatcaggagccaaaggatctactgtgaacaccatgcagatctcg
tgtctgctgggtcagatcgagttggagggccgcagacctccactgatgccttctgggaag
ttcctgccgtgcttccagccgtacgatccagcgcctggcgccggaggcttcgtgtccgga
agattcctgacgggcatcaaaccgcaggagtttttcttccactgcatggctggcagagaa
ggcctggtcgacactgccgtgaaaacgtccagatctggatatctgcagagatgcgtcatc
aagcatctggagggtttggtggttcagtacgatctgacggtgagggacagcgacgggtcc
gtggtccagttcctgtacggcgaggacgggctggacatccccaagactcagttcctgcag
catcggcagttctccttcatagaggacaactacgaggtcatcaagaggtcgcagggcctg
gatgaggcgctggcccgtttggaccctcagatggccagtcagcactttacagcgatccag
cgctggaaagcaaagagagaggtggagtgtccacgcagaggtatgcaacccagatttatc
ttcactatgaagtgcaccactgacctctgaccctttcatctgaactctccttcccagctc
gttaagcagtggcactctctggacgaaggcagcagatccaaatacaccaggaagtcgtcg
cgctgcccggagccctcgctgggttcgctcaggcccgacgtctgcttcggatccgtgtcg
gagaacttccaccacatcacagagaaatacctgcagagccgcggcagcgtgagcgaggac
ggcgtggactcccacagcctccgtcagctgctccactacaagtggcagcgctccctgtgt
gacccgggcgaggcggtggggctgctggcggctcagtccatcggcgagccctccacccag
atgaccctcaacaccttccacttcgccggcagaggagagatgaacgtcactctgggaatt
cctcgactcagagagatcctgatggtggccagctccaacattaaaacccccatgatgagt
gtcccagtgctgaacaacaggagagccctgaagaaagctaagatgcttcgtaagaaactg
gccagagtttgtctggctgaggtgctgcagaaagtggacgtggtcgagacgctgcggatt
gaaaatcaccacaagctgcgggcattcaaagtcaccttccacttcctgcctcctgaacgt
tactgtgacgacaagctgctgtcaccccaacagatcctccactacatggaaacgaggttt
ttcagtctgctgctcgaagccatcaagaagcgctccgccaaactggcctccatcgccgtg
gagaccaggaaggcaacccccagagataaggacaacgaaggagcagcggacacagcaggg
gtagatgacggagagggagggggagagggagagggagaggaggagagggagatcgtggac
gaccagggcaacgaaggagacgcagacgcttcggatgccaagaggaaaaacaaacaggag
gaggaggtggattatgacagcggggaggaggatgaagacgacgacgccgaggacaaagac
gatcagggggaggcggaggaggacaccaacgcggcagaggagtctcagcccgagtcggcg
ccgaagatgaagacaaacaggaggagagcggcggtggagatgagagtgaactctgtccta
cagtctatctcgtcaatcgagaggtacgagttcgaccagcagcaggagctgtggtgtgag
ctcgacctggtcttgccgatgagcaaggtgcacttcgacctgacctcggtgctgtcggcg
ctggcccagaacgccgtcgtcatggaaaccaggggcctgacgcgctgcctgctgagcgag
accaccacgaagaccggagagaaggagaccgtcctcaacacggagggcatcaacatgcac
gagatattcatgtacagcgacatcttggacatcaacagactgtactccaacgaggttcac
gccatggccaagacctacggcatcgaggtggctctgaaggtcatcgagaaggagatcaaa
gatgtctttgctgtctatgggatcgaggtggacccccgacatctgtcgctggtagcagac
tacatgtgcttcgaaggcgtttacaaaccgttaaaccgacacgccatcacgtccaactcc
tctccgctgcagcagatgaccttcgagaccagctacaagttcctcaaacaggccaccatg
ctggggtcacatgatcagctggcgtcgccctcagcctgcctggtggtggggacggtcgtc
cgaggaggaacgggactgttcgagctgaagcagcctctgcagtag
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integrated database retrieval system
