Embiotoca jacksoni (black perch): 138211115
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Entry
138211115 CDS
T10523
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138211115 (pcdh19)
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Protocadherins
138211115 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
138211115
NCBI-ProteinID:
XP_069026842
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MQTKEMELIELTAVFLLFWVGTEAVINLKYGINEEMKPGSVIGNVTKDALKQGFQIAPQP
PYLRVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCIISLEVMSNSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYSYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
EPVYTVNVMENSPINTLVIDLNATDPDEGTNGEVVYSFNSYVTEKTRDAFKIDPRTGIIT
VNGDLDYETTQIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNSPIISLLSLNTEMVEVS
ENAQRGYVIALVRVSDKDSGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTY
NLTIQAEDSGIPPLRATKSLVVKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTRMFGENVKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQEPIGPVNLSLIFIIALGSIAAILFITMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQSHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVSIPPRTKSPEHGRNVIALSIEA
TTVDVPHYEDGTTKRTFATFGKDGPDDVERGDIKGKRTQESQVCSPKANGGAVREAGNGR
EAASPITSPVHLKSPVSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPAVREINTLLH
DGRDKESPSSKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaaggagatggaattaatagaattaactgctgttttcctcctattctgggtt
gggactgaggctgttatcaacctaaagtatggaataaacgaggagatgaagcccgggtca
gtgattggaaacgtgacaaaggacgcactaaagcaaggatttcagattgcaccgcagccc
ccatacttgagggttatttccaattcagaaccacgatgggtggaactcagtccagccgga
attcttacaacccaaatgaaaatagatcgggatgtagtttgtcgacaaaacccaaagtgc
attatttccctcgaagtgatgtcaaactctatggagatctgtgtcatcaaagttgaaatt
gaggatttgaacgataacgcacccagattcccaacgagccacattgacattgaaatttca
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactcgggg
atatttggagtgcaatcatattccatcaccccaaatgagcttttcggactagaaataaag
accagaggggatgggtccaaaattgctgagcttgttgtgcaaaaatcgttagacagggag
acccagtcccactattcgtatgaaatcagcgcagaagatggaggagatcctccaaagata
ggtgcggtccagttaaatatcaaagtaattgattctaatgacaacaacccggtttttgat
gagccggtgtatacagttaatgtgatggagaattcccccatcaatacattagtcatagac
ctgaatgcaacggatcctgacgaaggcactaatggagaggttgtatactccttcaacagt
tacgtcaccgagaaaacgagggatgctttcaaaattgaccccagaaccgggatcatcact
gtcaacggcgatttggattatgaaacaactcaaatatacgagatcgacgtccaagccaaa
gatttaggtcccaactccatcccagctcactgcaaagtcacagtgaacgtgatggatacg
aacgataactcacctatcatcagtttactctcactgaacacagagatggtggaagtgagt
gaaaacgcgcagcgtggatatgtcattgcgctggtgagggtgtcagataaggattctggg
gcaaacggcaaagtgcagtgcaggctgcagggcaatgttccgttcagactgcaagaatat
gagagcttctccacgatacttgttgatggcaggctggatagagagcagaaggacacatac
aacctgactatccaggcggaggacagcggcatccctcctctacgagccacaaaatctttg
gtagttaaagtcacagatgaaaacgacaaccctccccactttcttaagccacactatcag
gagatggtgatggaaaacaacctccctggttcgtgtctgctcgcagtatccgcagaagac
ccggatctggggatgaatggcacagtttcctactccatagtccctggtgagattaagcac
atggatgtaaacacatatgtcagcataaacccatcaggccgcatttactccatgagatca
ttcgaccatgaatacaccaggacttttgatttcaaagttttggccagagacaacggtaat
ccctctttatcaagcaacgccacagtgcgtattgttgtgctggacgtcaacgacaacaca
cctgttatgacaaaccctccgctggttaatggcacagcggaggtttccatccccagaaac
gctggggtgggttacatggtgacacaagtgaaagctgacgactatgacgagggggagaac
ggacgcctgacctacaccatctcagagggggacagggctttctttgaaatcgaccaggtg
aacggagaggtgcgctccaccaggatgtttggagaaaatgtcaaatccacgtacgagatc
acagtcgtggcgagggaccacggcaagccctccctgtccgcttcggcctacatagtggtg
tacctctctccagacctgaatgcgcaggagcctattggacctgtcaacctgtctctcatc
ttcattatcgccctgggctctatcgcagccatcctctttattaccatgattttcgtggcg
gtcaagtgcaagagggataacaaggagatccggacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcatatggcaaccagaagaagtccagcaagaagaagaagctg
agcaagaacgacatccgcttggtgccgcgagacgttgaggagacagacaagatgaatgtg
gtgagttgctcatctctcacctcctcgctcaactacttcgactaccaccagcagagcctg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcagctcccaaccatggctatcagcacccgttcacagggcagagtcaccagcagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccattgactccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacatcgacattcaag
gacctggaggggaacagtctgaaggacagcggccacgaggagagcgaccagaccgacagt
gaacatgatgtccagagaggacactatgttgacacggctgtcaatgacgtgctgaacatg
actgtcccccccaatgtttgccagctgcctgaccaagatcccagcgagggctttcactgc
caggacgagtgtcgcatcctcggccactctgaccgctgctggatgcctcgtgtctcgatc
ccgccacgtaccaagtcgcccgagcacggccgtaatgtcattgctctgtctatcgaggcc
accacagtggacgtgccgcactacgaggacggcacaaccaagaggacttttgccaccttt
ggcaaggatgggcctgacgacgtggagcggggagacataaagggaaagcggactcaggag
tctcaggtgtgcagccccaaggccaatggaggggctgttcgcgaagctggcaacgggcgt
gaggcggccagccccatcacttcccccgtgcacctgaagagcccggtatccaagccgtcg
tctgcctacaacacactgaaatgccgcgacgcagagcgaatcgccaaccacagcctgctg
cggcagccggaggggaaggacagtgagccggccgttcgggagatcaacacgcttctccac
gatggccgagacaaggagtcccccagcagcaagcgcctgaaagacattgtgctttag
DBGET
integrated database retrieval system
