Embiotoca jacksoni (black perch): 138211144
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Entry
138211144 CDS
T10523
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138211144 (pcdh10b)
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Protocadherins
138211144 (pcdh10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
138211144
NCBI-ProteinID:
XP_069026915
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MIVLLIVLCITDGALSQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPNSRTP
YLEVNLENGVLFVNEKIDREHICKQSANCQLNIEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLSE
NAPVGTLVIQLNATDMDEGLNGEIVYSFSNHISSRVKDLFSIDPRTGRIEVRGEVDFEES
SLYQIFVQAKDMGPNAVPAHCKVLVKVTDLNDNAPEITFSTVTESVSEKAAPGTVIALLS
VTDRDAEENGQIHVEILGDVPFKLKSSFRNYFTIVTDGPLNREQADSYSVTVVARDKGTP
SLATSKSIRVQVSDENDNSPTFTQSIYDVYVTENNVPGAYIHAVTALDPDIGQNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQAKDAGTPELSSNATVKV
IIVDQNDNAPLVLAPLGKNGTAKEPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLLIEVRDHGQPPLSSSASVMVMLVDSMAD
GRGGGDRGGTAKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNIYTCLTS
DCCLGCTSCCSRQGRARKKKLSKSDIMLVQSAVNVSGAGTAQVPVEESGTFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPCSPSRSTDTDHNPCGAIVTGYTDQQPDIISNGSILSNETK
HQRAELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDSVPDTERGKGFASSFRVDIP
ETA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcttttgattgtcctgtgcatcacggatggagcgctctctcagatacgctac
tctgttccggaggaggcggaccatggcaccttggtggggaatatcgccgaggacctgggt
ctggacctcaccaagctggcctcccgccgtttccaagtggtgcccaactctcggacaccc
tacctggaggtaaacctggagaacggcgtcctgttcgttaatgagaaaatcgaccgggag
catatctgcaagcagagcgccaactgccagctgaacatagaagtgttcctggagaaccca
ctggagttgtttcgggtcgaaatcgaggtggtggacattaacgacaacccgcccagcttc
ccggagacggacatcacggtggagatctcggagagcgccactccgggcacccgtttccct
ctggagagcgcgttcgacccggacgtggggtctaacgctttacgcacgtatgatatcacc
actaacaactacttttacctggacgtgcagacacagacggacggaaacaagttcgcggag
ctcgtcctggagaagccgctggaccgggagcagcaggcggcgcacaggtacgtgctgacc
gcggtggacggcggccagcctccacggactggcaccgcgctgctggtggtcaaagtgctg
gactctaacgataacgtgccggtgtttgaccagcccgtctacacggtcagcctctccgag
aacgcaccggtgggcaccctggtcatacagctgaacgccaccgacatggacgagggacta
aacggggagatcgtttattctttcagtaaccatatctccagccgcgtgaaggacttgttc
agcatagatccgcgcaccgggcggatcgaggtgcgcggagaggtggattttgaagagagc
agcctgtatcagatctttgtgcaggccaaggatatggggccaaacgccgtgcctgcgcat
tgcaaagtgctggtcaaagtcaccgacttaaacgacaacgcaccggagatcaccttcagc
accgtcacggagtcggtgagcgaaaaagcggctcccggtaccgtcattgctctgctgagt
gtgacggaccgggacgcagaggagaacggacagatccacgtggaaatcctcggtgatgtc
ccgttcaaattaaaatcctccttcaggaattatttcaccatagtgaccgacggaccgctg
aaccgggagcaggcggactcctactctgtgacggtggtcgcccgggataaaggaacaccc
tcactcgcaaccagtaagtccatccgagtccaggtgtcagatgaaaacgacaactcgccg
acctttacgcagtccatctatgacgtgtatgtgacagagaacaacgtgcctggggcgtac
atccacgcggtcacggctctggacccggacatcggccagaacgcgctcatcagctactcc
atattagagtgtgacatccaggggatgtcagtcaaaacctatgtgtcaatcaacgaggaa
acaggctacctgtacgcactcaggtcctttgattatgagcagctgaaggatttcactttt
atggtccaggccaaagacgcaggcaccccggagctgtcctccaacgccactgtcaaagtg
atcattgtggaccagaatgacaatgcccccctcgtgctggcgcctctggggaaaaacggc
acagccaaggagcccctgccccgctcagctgagccgggctacctggtgacccgcatcgtg
gccatggacgcggatgacggtgagaacgctcgcctgtcctacagcattcagagagggaac
gagaacggcatgttccggatggactggcggacaggtgaactcaggacggcgaggcgcgtg
tcggccaagcgggacccccaccagctgtacgacctgctgatcgaggtgagggaccacggc
cagccgccgctgtcctccagcgccagcgtgatggtgatgctggtggacagcatggctgac
ggccgcggaggcggagaccgagggggcaccgccaaggccaaagacggcaccctggacctc
accctcatcctcatcatcgctttgggctccgtttccttcatcttcctcctggtcatgatt
gtgctggctgtgcgctgccagaaggacaaaaagctcaacatttacacctgcctgaccagc
gactgctgtctcggctgcacctcctgctgctcacggcagggccgggcccgcaagaaaaag
ctcagcaagtcggatatcatgctggtgcaaagcgctgttaacgtcagcggggccggtacg
gctcaagtccccgtggaggagtcggggaccttcggctcccaccaccaaaaccagaactat
tgctaccaggtatgtctgactccagagtctgccaaaaccgacctcatgttcctaaagccg
tgtagtccatctaggagcacagacaccgatcacaacccgtgcggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaacggcagcattttatcaaacgagaccaaa
caccagcgagctgaactcagctacctggttgacaggccgcgacgtgtcaacagttcggcc
ttccaggaagcagacctggtcagctccaaagacagcggccacggagacagcgagcaggga
gacagcgaccacgacgccaccaatcgaggccattcctctggtgctgacctgttctctaac
tgcacagaggagtgtaaggccctgggccactcggatcgctgctggatgcccagcttcgtg
ccctccgacgggcgccaggggccggactaccgcagcaacctccacgtgcccggcatggac
tcggtcccagacacagagcgaggaaaagggtttgctagctcctttcgtgtggacataccg
gagactgcgtga
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