Embiotoca jacksoni (black perch): 138211409
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Entry
138211409 CDS
T10523
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
138211409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eja03041
]
138211409
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138211409
Spliceosome [BR:
eja03041
]
Complex C
Other components
Complex C specific factors
138211409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
Utp25_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138211409
NCBI-ProteinID:
XP_069027382
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
METENRAKKRSAGEDDRSGSEGPEDDVPYVPYIPFKIRKQQMLHKMSRLRGKAVDEEHKD
SGEEQRDEDEGLGPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALM
SVKEMAKGIIYDDPIKTSWKAPRYILNMPDTRHERVRKKFHILVDGDGIPPPIKSFREMK
LPPAILKGLKKKGIVHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFSLEQE
KRLPFFKREGPYGLIICPSRELARQTHGIIEYYCKLLEEEGAPQLRTALCIGGMSVKDQM
EVVKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKG
QRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLEC
LQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLV
ATDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMD
LKALLVEAKQKVPPVLQVLQTGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVT
NIGRKDYLAHSSMDF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaaaatcgagccaaaaagaggtccgctggggaggatgaccggtctggctcc
gaggggccggaggacgacgtcccctacgtgccctacatcccgttcaaaatcagaaagcaa
caaatgctacataagatgtcacgtctgcgagggaaggcagtggacgaggagcacaaggac
agtggggaggagcagagggatgaggacgagggtcttggtccacgctccaatgtcagtctc
cttgatcagcatcaacacctcaaggaaaaagcagaagcccgtaaggagtctgctaaggag
aagcagctgaaagaggaagagaagattcttgaaagcgttgcagagggcagagctctgatg
tctgtgaaggaaatggccaaaggtatcatatacgatgatcccataaaaacaagctggaaa
gcaccacgctacatcctgaacatgccagacaccagacacgaacgcgtcaggaagaagttc
cacatcctggttgatggagatggcatccctcctccaatcaaaagcttcagagagatgaag
ttgccaccagcaattctgaaaggtttaaaaaagaagggaattgtgcacccgacaccgatt
cagattcaaggaatccccacagttctgtcaggtcgagacatgattggcattgccttcact
ggatcaggaaagactttggtcttcactctgccaatcatcatgttttccctggaacaggag
aagaggctcccattctttaagagagaaggaccatatggactcatcatctgtccttcacga
gagttggcgaggcagacacatggcatcatcgagtattactgcaagctactggaagaggaa
ggggctcctcagctgcgcactgccctctgcatcggaggaatgtctgtcaaagatcagatg
gaggttgtaaaacatggtgtccacatgatggtcgccacccctggaagattgatggacttg
ctgcagaagaagatggtgagcctcgacatatgccgctacttggctctggacgaagctgac
aggatgattgacatgggttttgaagaggacatcaggaccatcttctcctacttcaaggga
caaagacaaaccctgcttttcagcgccactatgcccaagaagatccagaactttgccaag
agtgcgctggtcaaaccgatcactattaacgtgggccgggccggagctgccagcttggat
gtcatccaggaagtggagtatgtcaaagaggaggccaagatggtttacctcctagagtgt
ctccagaaaacaccacctccagtgctgatatttgctgagaagaaggccgatgtcgatgcc
atccatgagtatctgctgcttaaaggagtagaggcagtggccatacatggaggaaaagat
caggaggaaagaaccaaagccattgaagcattcaaagaaggaaagaaagacgtcttggtc
gccacagatgttgcctccaagggtctggatttcccagctattcagcatgtggtgaactat
gacatgcctgaggagatagagaactatgtccacagaattggaagaactggacgatcaggc
aagactggtattgccacgacattcatcaataaaggctgcgatgagtccgtattgatggat
ctgaaagctctgcttgttgaagccaagcagaaagttcctccagtcctgcaggtcctccag
acaggagacgagaccatgttggatatcggaggagagaggggctgtactttctgtggtggt
cttggccatcgcattacagactgtccgaagttggaggccatgcagaccaagcaggtcacc
aacatcgggcggaaagactacctggctcatagctcaatggacttctaa
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