Embiotoca jacksoni (black perch): 138211621
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Entry
138211621 CDS
T10523
Symbol
pcdh20l
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138211621 (pcdh20l)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eja01009
]
138211621 (pcdh20l)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138211621 (pcdh20l)
Protein phosphatases and associated proteins [BR:
eja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138211621 (pcdh20l)
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Protocadherins
138211621 (pcdh20l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
138211621
NCBI-ProteinID:
XP_069027691
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MGHGTPDNMNWAGLLQNLLLVVHIRPIICGSVRFSVPEELEPGALIGSLSKHFPPPYQLL
TQEYLWMDKNTGNVYTSEQKMDREALCPKETKAEECIILHNAVVGPSGDLIQFPVIIEDI
NDNAPHFESSEIHLRLSEDVTVGTSFLLDDHAEDRDTGHNGELQYHLKGYKGVFSVKVKE
DRLLITLVVQSALDRETQDLYQMQLVATDRGADPLSATATLIVTVTDVNDNCPSFSSDSP
RRATIPGDSPKNTVVTQVRATDPDTGPNAAIIYSLSPKVSERAKKLFSLDSLTGYIRLTQ
DLQSDNSEELVLKVLASGHHCPPADTQVTVSVLPKMNQELTIKIGFIAEHQNQTLVLPEN
HPPSVLAVLELEGDSSFKGLCLAIEGEVPFSLSPQNGKYLLSTSKPLDYEMKSEHHIPVV
VQGTSAKGSVIVPSRHVIRLLVADVNDNSPHFLHAHYQLEVEENNQPGMSLLQVSASDAD
SGNNGRVAYRLGKYPSDIFNIDSATGQLSVSAPLDREQQGVHKLTVFARDSGSPPLESMA
TVVIRVLDLNDNAPVFLTPHFIFFIPENVPTFAQVGRIEVKDRDEGENGNIELHVVKSSG
PFVVGNTQGTLRTTTNLDRETQDRYELYLLASDHGHPLALTSTARVTIFVEDINDNQPKV
ILPSNNSSCLTVSPDTLAGTMVTKIYAIDDDSGLNSEITYSVVAPEPVQNSSPFQVDSRS
GNITLSQQLLHKDLGMHHLFIVIRDGGKPAPLYTTVWVNLLVNESVEPCHLDRAPTWTGI
PDLVQTPSKAPICEADTTRSAQVTLLIGLGMMLASTCFLAVTAVLYLKQRRISLQQNKRR
YGEENEIPLRLKDKYYSDE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactcctgataatatgaactgggctggattactgcagaatctgctgctt
gtggtccatatcaggccgatcatatgtggatctgtccggttttctgtcccagaggaactg
gagcctggtgctctgattggatcacttagtaaacactttccacctccgtaccagctcctg
acccaggagtatctgtggatggataaaaacaccgggaatgtctacaccagtgagcaaaag
atggatcgcgaggccctctgccccaaggagacaaaagccgaggaatgcattattctacac
aatgctgtcgtggggccctcaggagaccttatacagtttcctgtgatcatagaggacatc
aatgacaatgcaccacattttgaaagtagtgaaatacacctgagactgtctgaggacgtg
actgtggggaccagtttcttgttggatgaccacgctgaggacagggacactggtcataac
ggagagctgcagtaccacctcaaaggctataaaggggttttcagtgtaaaagtcaaagaa
gacaggctgttaatcacgctggttgtacaaagtgctctggatagggagactcaggatctg
tatcagatgcagctggtggccactgatcgtggcgcagaccctttaagtgcaacggcaact
ttgatagtcacagtgacagacgtcaatgacaactgtccgagcttcagctctgacagccct
cgcagggccaccatcccgggagactccccgaagaacacggtggtcactcaggtcagagcc
acagacccagacacaggcccgaacgctgccatcatttactccctcagtcccaaagtctcc
gagcgggccaagaagctgtttagccttgacagcctcactgggtacatcaggctaacgcaa
gacctccagagtgacaactccgaggagctggtgttgaaagtgttagctagtggccatcat
tgccccccagcagacactcaggtaactgtatccgtgctccccaagatgaaccaagagctg
acgatcaagattgggttcatagcggagcatcaaaaccagactctggtgttaccagagaac
cacccccccagcgtcttagctgttttagagctcgagggtgacagcagctttaaaggctta
tgtcttgccattgaaggtgaagtgcctttctctttgagcccgcagaatggcaagtatctg
ctttccacatcaaagcccttagactacgagatgaaaagtgaacatcatattcctgtggta
gtgcaagggacatcagccaaaggatctgtgatcgtcccttccaggcatgtgataaggctg
ctggtggcagatgtcaatgataactcgccacatttcctccatgctcactaccagctggag
gtggaggaaaacaaccagccaggaatgtccctgctacaagtctcagcttcagacgcagac
agtggaaacaacggcagggtggcctacaggctgggtaaatacccgtctgacatctttaac
attgactctgcgacaggacaactgtctgtgtcagctcctctggatagggaacagcagggt
gtacacaaactcactgtgtttgcacgagatagtggctctcctccgttggagtccatggcc
acagtggtcattcgtgttctggacttgaatgacaatgcgcctgtttttctaacccctcac
ttcatctttttcatccctgagaatgtaccaacattcgcccaagtagggaggatagaggtg
aaagacagagatgaaggggagaacgggaacatagaattgcatgttgtaaaaagcagtgga
ccttttgttgtgggtaacacccaggggacattgcgcaccaccaccaacttggaccgcgag
acacaggaccgctatgaactctacctgttggccagcgatcatgggcacccgctcgctttg
acttccactgccagagtgactatctttgtggaggacatcaatgacaaccagccaaaagtg
atccttcccagcaacaactcctcatgcctcactgtctctcccgacaccctagcaggcact
atggtaacaaagatctatgccatcgacgatgactcgggtcttaattcagagattacatac
tctgttgtagcgccagagccagtgcaaaacagcagccccttccaggtagattcaaggtca
gggaacatcaccttaagtcagcagcttctacacaaagacctgggaatgcatcacctgttc
attgtgatcagagatggagggaaaccagctccactttacaccactgtctgggttaatctg
ttggtcaacgagagcgtggagccatgccacttggacagggcacccacctggacaggaata
cctgacttggttcaaaccccttcaaaggcccccatctgtgaggccgacactaccagatct
gcacaagtgacattgttaatcggcctgggtatgatgctggcctccacatgttttctggca
gtgacagctgttttatacctgaagcagaggagaataagtctacaacagaacaagaggcga
tacggcgaggagaatgagattccactcaggctcaaagacaaatattactccgatgaataa
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