KEGG   Embiotoca jacksoni (black perch): 138211768
Entry
138211768         CDS       T10523                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
eja  Embiotoca jacksoni (black perch)
Pathway
eja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138211768 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eja03041]
    138211768 (rbm22)
Spliceosome [BR:eja03041]
 Complex B
  Other components
   Prp19-related factors
    138211768 (rbm22)
 Complex C
    138211768 (rbm22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded Nup35_RRM_2 zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 138211768
NCBI-ProteinID: XP_069027989
LinkDB
Position
Unknown
AA seq 427 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGISVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAASSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSITTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPISSPAV
MNLGLPPPPGINPPPPGYGHPMFHPMGPMAPPLPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRQGD
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcgacttccctgggctccaacacctacaacagacaaaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaatccttacatccgtatgaccaaggagaag
tatgggaaagaatgcaagatttgtgctcgaccctttaccgtgttccgatggtgtccgggg
gcacggatgcgtttcaagaagaccgaagtctgtcagacctgcagcaaaatgaaaaatgtt
tgtcagacatgtctgctggatctggagtatggtttgcccatccaggtccgagacaccgga
atttctgttaaagatgaggttcccaagtccgatgtgaataaagagtactacacacagaac
atggagagagagatagccaattctgatggcacacggccggttggccagctcggcaaagct
gcaagctctagtgatatgttgctcaaactggcccggaccacaccctattacaagaggaac
cggccacatatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tacaggcatgagaagcccacagatcctgatgaccctctggccgaccagaacataaaggat
cgatactacggtatcaacgacccagtagctgacaagctgctgaagcgggcctcaactatg
ccccgactggaccctccggatgacaaatccatcaccaccctgtacatcgggggtttggga
gatactgtcacagatggcgatctcaagagtcacttctaccagtttggtgaaattcgaacc
attaccatcgtccagaggcagcagtgtgcgttcatccagttcgccacgcggcagtcagct
gaaatggcagcggagaagtccttcaataaactcattattaatggacggaggctcactgtc
aagtggggaaggtctcaggcagcaagagggaaggagggtatcaaagatggtgtcagtgag
atgggtaccagactggatcccgtacccggactgcctggagctttacctccaccaccagct
ctagatgaagaggctcctgcaaactacttcaacctcgaccccatctcttctcctgcggtc
atgaacctcggtttgcccccacctccaggcatcaacccacctcctccaggttatggccat
ccaatgtttcacccaatgggtcccatggccccacctcttccccctcctatgagcatgaga
cctcccggtcaaatccactacccatcccaggatcctcagcgcatgggtgctcacgccgct
catggctcacgccaaggtgattag

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