Embiotoca jacksoni (black perch): 138211778
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Entry
138211778 CDS
T10523
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138211778 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eja01009
]
138211778 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138211778 (pcdh11)
Protein phosphatases and associated proteins [BR:
eja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138211778 (pcdh11)
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Protocadherins
138211778 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
DUF6377
Motif
Other DBs
NCBI-GeneID:
138211778
NCBI-ProteinID:
XP_069028004
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MDLASQAHVLVVLLACVVLLCWAQERDYTVKEEQPENIRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFTEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVNEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPIFKDSELEVTVAENAPMGTSVAQLHATDADLGSNAQIHFAFSNQISSSTKRHF
AINSSTGLITVKQPLDREVTPVHKLIILASDGSSTPSRATVIVNVTDINDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKVSATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADGG
DNAVITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFAIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLQAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQNPGQ
TPEKSFNSPPPICPHKEACLLGKITSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTAS
TTQPLPLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGH
SDSCWMPPALAQFQGPGSNSPTSTPTTAGITATLTSFGFQQSCARGVKANMGSMGVMDGR
HTLGRSVPKKDELDKGINRPQFYNTLDRHCSSKKEDPVKVIPLASFSSPGQQTPTGGGSS
SFLHEHQL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaagtcaggcgcatgtgctggtggtcttactcgcctgtgtggtcttacta
tgctgggcccaggagagggactacacagtgaaggaggagcagccagagaacatccgcatc
ggaaacctgcgcaaggacctggacctcaacctagatcccaacatcaggctatcctccccg
ctgcagttcaagcctgtgtataagacaggtgacgtgcctttggtgagggtggaggccaac
acgggggagatctttaccaccaatcacaggatcgaccgggagaagctatgctcaggggtc
ttcactgagaaacgctgctattacgagattgaggtggcagtgctgcctgacgagatcttc
agattggtcaagatccgcttcctgattgaggatgtgaatgacaacgcgccccttttccag
tccactgttataaacatctccatcccagagaacacagccatcaacacccgatacccggtg
ccctcagcatttgaccctgatgtagggatcaatgggatccaacactacgaactggtgaag
agtgtcaatgagtttggcttagacatcattgagactcctgaaggcgacaagtggccgcag
cttatcgttcagcagaatctggatcgcgagcagaaggacacctttgtcatgaagataaag
gtggaggatggtggcaaccctcctaaatccagcaccgccattctccaagtcaccatttct
gatgtcaacgacaatcgtcccatcttcaaggacagtgaattagaggtcacggtggcagag
aatgcaccaatggggacatcggtggcacagcttcacgccacggacgcagacttgggttcc
aacgcacagatccacttcgccttcagcaaccagatctcttcctcaaccaaacgtcacttt
gccatcaacagctctacaggactgatcactgtgaagcagccactggacagggaggtaact
cctgttcataaactcatcatcctggccagcgatggcagctccaccccctccagagccacg
gtgattgttaatgtaacagatattaatgacaatgttccctctatagacactcgctacatt
atcaacctggttaatgggactgttctgctgtctgagaacgcacctctcaacactaagata
gccctaattactgttactgacaaggatgcagatctttatggcaaagtagcttgctacact
gaccatgatgttcctttccggttgaagcctgtctttaatgatcagttcttactagagaca
gctgcccctctagattatgagacaactcgagaatatgcaattaaaattgtggcctccgac
aggggcacgcctcctctgaacacttcagctatggtcttaattaaaatcaaggatgagaac
gacaacgcacccatctttccccaaccggaaatccaactttccataccggagaacaatgac
ccctccacacagttaataaaagtcagcgccactgatgcagacagcgggcataatgctgag
attatttatactctcggccctgatgcacctgatgggtttaacatagacagacggtcagga
attctctcagttggcaaacgactggacagagagaagcaggagaggtactcattcactgtc
atagcgagggacaatggctccacgtccctgcagagcaatgtcacagtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacaccctgagtacaacttctatgtgcct
gagaacctgcctctctatggaaccgtgggcttaatcacagtgacggacgcagatggggga
gataatgctgttattaccctgtccattttgaatgggaaagacaatttcatcatcgaccct
caaactggcgtgatcaaacccaacatcacctttgatcgggagcagcaaagctcttacaca
tttatggtcaaggcagttgacggagggcaacctccaagctcctcctacgcaaaggtcact
atcaatgtagtcgatgtgaatgacaatcgccctgtgttcgtcatcccgtcctccaattac
tcatatgacctagtgcgaaccaccaccacccctggtgctgtggtcaccagagtgtttgcc
atcgacaatgacacaggtatgaatgctgagctgcagtacagtattatcagcagcatcatc
atcacatctagggtctcccctcgtggtctctttgccatcgacaaaacaacgggtaacata
acactgcaggagaaaatagtggcagctgatcaggggttgcatagactggtggtgaaggtc
aaagatttaggccagcctgagtcattacaggctatcgcacttattcacctgtttgtgaat
gacactgtgtcaaatgctacctttatccaagagcaactgcgaaaaagtatggagacaccc
ttggaccgtaacataggggacagtgaggtaacacctcaagctaatggatatgtgattgtt
gtcatagctatcatagcagggaccatgactgtcatcttggtgatatttgtgactgctttg
gtgcgctgccggcagacacccagacacaaagtagtacagaagggcaagcagagtggagag
tgggtgtcacccaaccaagagaaccgtcagatcaagaagaagaagaagagaaagaagcga
tcccccaagagcctcctcctgaactttgtgaccatagatgaatccaagcctgacgaccct
acccatgagcatgttaatggcacactggatctccctgtggagttagaggagcaaaccatg
gggaagtacaattgggcgaccacgcccacaaccttcaaacccgacagcccagatttagcc
aagcattacaagtccgcgtcccctcagcctacatttcaaataaaaccggaaactccagtg
gccccaaagaaacaccatgtgatccaggagctccccttggacaacacattcgtggtgggc
tgtgactcactctccaagtgctcatcgactagctccgacccatacagtgtctcagagtgc
agctgtcaggggggattcaagaccgcggggcaaatcaccacccgacagaacccgggccag
acaccggagaagtcttttaactcaccaccccccatttgtcctcataaggaggcctgtctg
cttggcaagataacctctgtaaatacccaacgccgcgtgacattccatcttccagacggt
tcccaggagagctgcagtgacagcgggctgggagacccggagccaagcagcacagccagt
accacccagcctcttcccctcagcttcccccaggaggagtactatgagcaaacatcaccc
aacagtcgcaccgagggagacggaaactcagaccctgaatccaccatcgaggtaaacctg
cagaaagccttggctgaggcctctgagacctgtacccaggagtgtctaatactgggccac
tccgacagctgctggatgcccccagccctggcccagttccagggtcctggtagcaacagc
cccacctccacccctaccaccgccggcatcaccgccaccctcacctcttttggcttccag
cagagctgtgcccggggagtaaaagctaacatgggcagcatgggggtcatggatggccgc
cataccctgggcaggtctgtgcccaaaaaagatgaactggacaaagggatcaaccggccg
cagttctacaacaccctggatagacactgcagtagtaagaaggaggaccccgttaaggtc
atccccctggcgagcttctcttctcccgggcagcagacgcccactggcgggggcagcagc
tctttcttacacgagcaccagttgtaa
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integrated database retrieval system
