Embiotoca jacksoni (black perch): 138211834
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Entry
138211834 CDS
T10523
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eja03400
]
138211834 (ascc3)
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138211834 (ascc3)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
138211834 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
IstB_IS21
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
138211834
NCBI-ProteinID:
XP_069028068
LinkDB
All DBs
Position
Unknown
AA seq
2201 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKKEDWTEELCDLKAKRLKRQQLFAREGLTWQKIVHFCSEHQDK
AASQELKSLLQAAKHIVGTEHGQEAIESAAVFLFETFHNKDHVGTEETRAIKQMFGPFPS
SAAEASCACVTRLVAPLGDSRTEDFIRTQHSRHNPQRAAAFGRNIVFSYDSYTLDPLEDL
PGPEVHDDGAGLDFINFFNNQQSGRKVSGEEDVPGSGSSLSSGQESILRTEVEKYLNGGN
MISSNPEELCTSLFEMLASHRSDDELQNELFELLGPEGLEMISTLLQRRAAIVDSLLSIP
PDMTGYPPDGSRKVSSEVTKPAYGCQVTIQSEQEKQMMKMYRREEKKERKRGKGADDSDP
SDAVLTFDPREMRSQRELALLTARREPVLSRERVYERIRYPNVYDCYAEAAKTPAFVGGA
RMLLPEGINRDNNKMYEEVAIPPNDPMPIGFEEKPIYIHELDEIGQLVFKGMKRLNRIQS
LVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGIIRKEEFKIIYVAPMKA
LAAEMTKYFSNRLEPLGISVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGDVAL
SQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVAAFL
HVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQIHDTEEVCYNKVLEQVKAGHQVMVF
VHARNATVRTGMALIEMAKNHGETCFFQPVQGADYGQCEKQIQRSRNKQMKEMFPEGFGI
HHAGMLRSDRSMMESMFSKGHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGTLVDL
GILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLDSLADNLNAE
IALGTVTNVEEAVKWLSYTYLYVRMRANPLAYGINHKAYQMDPALEMYRKELVVESGRKL
DKAHMIRFEERTGYFASTDMGRTASHFYIKYNTIETFNELFNSQRTEADILNIVSKAEEF
EQLKVRDEEMEELEQMLCNYCELPAAGGVENGYGKVNVLLQTYIGRGEVDSFSLISDLSY
VAQNAARIVRALFEIALRKRWPAMTYRLLSLCKVIDKRLWGFAHPLRQFPNLSHVVLNRL
EEKKLSVDKLKEMRKDEIGHMLHHVNIGLTVKQCVHQIPSITMEASIQPITRTVLRVRLI
VTPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVTEEPQHVVFTIPIFE
PLPSQYYIRAVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVSALGNREFESL
YKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFNHYPSAKVVYIAPL
KALVRERIEDWKIRIEQKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSWQNR
SYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALANARDLAD
WLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIF
VSSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEDIIATVRDSNLKLTLAFGIGMHHA
GLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKSRRYVDYPIT
DVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLADHLNAEIAA
GTISSKQDAMDYITWTYFFRRLVMNPSYYSLEDVSHESINTYLSSLVEKGLRELECSYCM
EIKEDDQTIEPLTYGRISSYYYLRHQTIRTFKERLRAELPVHELLSVLSDAEEYAELPVR
HNEDQLNSQLAQQLPLQVNPHSFDSAHTKTHLLLQAHFSHAQLPCSDYTTDTKTVLDNAI
RICQAMLDVAANEGWLVTAISICNLVQMIVQGRWLHDSSLLTLPHVEQQDLYLFRKWTNR
KGRSDVGGFSGPIDGLPELIAACNGKESVFAAMVGQEFQSSQISQAWSFLSHLPVLEVRM
SVKGWWEKSQQQAERRLPAAGGNLREASSWLDVHADQEYVLQVALRRINVGQQRRKQDSK
AQAPRFPKMKDEGWFLVLGEVDRRELLAVKRIGYVRNHTAVSVAFYTPERTGKCIYTLYL
MSDSYLGLDQQYDIHLNVTPPSIAAQVNSEVSDSVADPSLS
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgaggctcaccggggccctgcgctccttctccaacgtcagcaagaaggaa
gactggaccgaggagctctgtgatctgaaggccaagcgtctgaagagacagcagctgttt
gccagagagggcctgacgtggcagaagatcgtccatttctgcagcgagcatcaggacaaa
gctgccagtcaggagctgaagagcctcctccaggcagccaaacacatcgtggggaccgaa
cacggtcaggaggccattgaaagcgctgccgtctttctgtttgagaccttccacaacaaa
gaccatgtgggcaccgaggagacgcgggccatcaaacagatgttcggtccgtttccttca
tctgcagccgaagcctcctgcgcctgtgtgactcggctggtggctccgctcggtgactcc
cgaaccgaagacttcatccgaacccagcactcccgtcacaacccccaacgagccgctgct
ttcggacgcaacatcgtcttctcgtacgactcctacactctggacccgctggaggacctg
cccggcccggaggtccacgacgacggcgccggcctcgactttatcaacttcttcaacaac
cagcagagcgggaggaaggtgtccggtgaggaggatgttcccggctcagggagctctctg
agctctggacaggaatccatccttagaacagaggtggagaagtatctgaacggaggcaac
atgatctcatccaaccccgaggagctgtgcacctccctgttcgagatgttggcgtcacac
cggagcgacgacgagctgcagaatgagctgttcgagctgctgggcccagaagggctggag
atgatctccaccctcctccagcgaagggcggccatcgtcgactccctcctctccatccca
cccgacatgaccggctacccaccagacggcagccggaaggtcagcagtgaggtgacgaag
ccggcctacggctgccaggtgaccatccagtcagagcaggagaaacagatgatgaagatg
taccgaagggaagagaagaaggagaggaagagaggcaaaggagccgatgacagcgaccct
tcggatgccgttctgacctttgaccccagagagatgagatcccagcgagagctggcgctg
ctgactgcacggagggaacccgtgctgagcagagaacgggtgtatgaacggatccgctac
cctaatgtgtacgactgctacgcagaggccgccaagacacctgcgtttgtgggaggagcc
aggatgctgctacccgagggaatcaacagagacaacaacaagatgtatgaagaggtggcg
atcccgcccaatgatcccatgcccatcggcttcgaggagaagcccatctacatccatgag
ctggatgagatcgggcagctggtgttcaaggggatgaagcgtctgaacaggatccagtcg
ctggtgtttgagacggcctacaacaccaacgagaaccttctgatctgcgctccaaccggc
gccggcaagaccaacatcgccatgctgacggtcctccacgagatccgccagcacctccag
cctggaggcatcatcaggaaggaggagttcaagatcatatatgtggctcccatgaaggcc
ttggcagctgagatgactaaatacttcagtaacagactggagccactcggcatcagtgtg
aaagaactcactggagacatgcagctaaccaaaggagagatcctccgaacacagatgttg
gtgaccacccctgagaagtgggacgttgtgaccaggaagagcgtcggggacgtggctctc
tcccagatcgtgcgtctcctgatcttggacgaagtccacctcctgcatgaagaccgagga
ccggttctggagagcctggtggcccggaccatcagacaggtggagtccactcagagtatg
atccggatcctcgggctgtccgccacgctgcccaactacctggacgtggccgccttcctc
cacgtcaacccctacatcggcctcttcttcttcgacagccgcttcagaccggtgcccctc
ggacagacgttcgtcggcatcaaatccaccaacaagatccaacagattcacgacacagag
gaggtttgttacaacaaggtgctggagcaggtgaaagcaggtcatcaggtgatggtgttc
gtccacgctcgtaacgccacggtgaggacgggcatggcactgatcgagatggcaaagaac
cacggagagacgtgtttctttcaaccagtccagggagcggactacggacagtgtgagaaa
cagatccagcgctccaggaacaagcagatgaaggagatgttcccagaaggctttgggatc
caccacgcagggatgctgcgctcggaccgcagcatgatggagagcatgttctccaaaggt
cacctcaaagttctggtctgcacggccacgctggcctggggagtgaacctgccggcccac
gcagtcatcatcaagggcactcagatctacgacgccaagcgcggcactctggtggatctg
ggcatcctggatgtcatgcagatcttcgggcgagccggtcgtccccagttcgacaagtac
ggcgagggcaccatcatcaccacccacgacaagctgagccactacctgaccctgctgaca
cagcagaaccccatcgagagccagttcctcgacagcctggcagacaatctcaacgccgag
atcgctctgggaaccgtcaccaacgtggaggaggctgtgaagtggctcagttatacctac
ctgtatgttcgcatgagggccaacccgctggcatacggcatcaaccacaaggcctaccag
atggacccggctctggagatgtacaggaaggagctggtggtggagtcgggcaggaagctg
gataaggcccacatgatccgcttcgaggagcgcaccggctacttcgcctccaccgacatg
ggcaggaccgccagccacttctacatcaaatataatactatagagaccttcaacgaactc
ttcaactctcagcggacggaggcagacatcctcaacatcgtctccaaggccgaggagttc
gaacagctaaaggtgcgtgacgaggagatggaggagctggagcagatgctgtgtaactac
tgcgagctgccggctgcgggcggcgtggagaacggctacgggaaggtcaacgtcctgctg
cagacgtacatcggccgaggggaggtggacagcttctcgctcatctcagacctgtcgtac
gtggctcagaacgctgctcggatcgtcagggctctgttcgagatcgctctgaggaagcgc
tggccggccatgacctaccggctgctctccctctgcaaggtgatcgacaagcggctgtgg
ggcttcgcccacccgctgcgtcagttccccaacctgagccacgtggtgctgaaccgcctg
gaggagaagaagctcagtgtggacaagctgaaggagatgaggaaggacgagatcggtcac
atgctgcaccacgttaacatcgggctgacggtcaaacagtgcgtccaccagattccctcc
atcaccatggaggccagcatccagccaatcacacgcaccgtcctgcgcgtccgtctcatc
gtcacgccggacttccgctggaacgatcaggtccacggctcagtgggcgagccctggtgg
ctgtgggtggaagatcccatcaatgatcacatctaccactctgaatacttcctgctgcag
aagaaacaggtggtgacagaagagcctcagcacgtcgtcttcaccatccccattttcgag
ccgctgccctcccagtactacatcagggccgtgtccgaccgctggctgggagccgaggct
gtctgcatcatcaacttccagaacctcatcttaccggagagacaccctccacacacagag
ctgctggacctgcagccgttaccggtgagcgctctggggaaccgggagttcgagagcctc
tacaagttcacccacttcaaccccatccagacgcagatcttccacacgctgtaccacacc
gacaccaacgtcctgctgggggcgccgacgggctccgggaaaaccatcgcagccgagatg
gccatgttcagagtcttcaaccactatccgtctgccaaggtggtgtacatcgccccgctg
aaggccctggtgagagagaggatcgaggactggaagatcaggatcgagcagaaactcgga
aagaaagtggtggagctgaccggcgatgtcactccagacatgagagcgatcgcgcaggcc
gacctcatcgtcaccacgccggagaagtgggacggagtgagcaggagctggcagaaccgc
agctacgtccagaaagtagccatcctcatcatcgatgagatccacctgctgggtgaagac
agaggtccagtgttggaggtcatcgtctccaggaccaacttcatctcctcacacacctct
aagagtgtccgagtggtcggtctgtccacagctctggccaacgctcgagacctggctgac
tggctgggcatcgggcaggtgggtctgtttaacttccgtccgtctgtccgtcccgtcccg
ctggaagttcatatccacggtttcccaggacaacactactgcccccgcatggccagcatg
aacaagcccaccttccaagcgatccgcagtcactccccggccaaaccagtgctgattttt
gtatcatctcgaagacaaactcgtctgacggccctggacctcatcgcctacctggcgaca
gaggacaaccccaaacagtggctgcaccaggacgagagagagatcgaggacatcatcgcc
accgtcagagactccaacctgaagctcacgctggccttcgggatcggcatgcatcacgcc
ggcctacatgagagggacaggaagacggtggaggagctgtttgtcaactgtaagatccag
gttctgattgctaccagtactctggcctggggagtcaacttccctgcccatctggtggtc
gtcaagggaactgaatactttgacgggaaatccaggcgctatgtggactaccccatcaca
gacgtcctgcagatgatgggacgagcaggtcgtcctcagtttgacgaccagggaaaagcg
gtgattctggtccacgacatcaagaaggatttctacaagaagttcctgtacgagccgttt
cctgtcgagtccagcctcctcagcgtgctggcggaccatctgaatgccgagatcgctgca
ggaaccatctcatccaaacaggacgccatggactacatcacctggacctacttcttcaga
cggctggtgatgaaccccagttattacagtctggaagacgtcagccacgagtccatcaac
acatatctgtccagcctggtggagaaaggtctgagggagctggagtgttcctactgcatg
gaaatcaaagaggacgatcagaccatcgagccactgacatacggtcggatctcctcctac
tactacctgaggcatcagaccatccgcacctttaaggagcgtctgagggcggagcttccc
gtccacgagctgctctccgttctctcggatgcggaggagtacgcagagctgcccgtcaga
cacaatgaggaccagctgaacagccagctggctcagcagctccccctgcaggtcaaccct
cactccttcgacagcgcacacaccaagacccacctgctgctgcaggcccacttcagccac
gcccagctgccctgcagcgactacacaaccgacaccaagacggtgctggacaacgccatc
cgcatctgtcaggctatgctggatgtagctgctaacgaaggctggctggttacagctatc
agtatctgtaacctggtgcagatgatcgttcagggccgctggctgcacgactcctcctta
ctgacactcccacacgtggagcaacaagacctctacctgttcaggaagtggacgaacagg
aaggggaggagcgacgtggggggcttcagcgggccgatagatggacttcctgagctgatc
gctgcttgcaacggaaaagaaagtgttttcgctgcgatggtcggccaggagtttcaatca
agtcagatttcacaggcctggtccttcctcagccacctgccggttctggaggtcaggatg
agcgtgaagggctggtgggagaagagccagcagcaggcggagcgtcgcctccccgcagca
ggcggcaacctgcgggaggcgagcagctggctggacgtccacgccgaccaggagtacgtc
ctgcaggtggcgctgagacgcatcaatgtgggccagcagaggagaaagcaggacagtaag
gcccaggctccccggttccccaagatgaaggatgagggctggttcctggtcctgggggag
gtggaccgcagggagctgctggccgtcaaacggatcggatacgttcggaaccacacggcc
gtgtctgtggccttctacacaccagagaggaccgggaagtgtatctacactctgtacctg
atgagtgacagctacctgggtctggaccagcagtacgacatccacctgaacgtaacgcct
cccagcatcgccgcccaggtgaacagcgaggtgtcggactcggtggccgatccgtccctc
agctga
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integrated database retrieval system
