Embiotoca jacksoni (black perch): 138212189
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Entry
138212189 CDS
T10523
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138212189 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138212189 (arid1b)
03021 Transcription machinery [BR:
eja03021
]
138212189 (arid1b)
03036 Chromosome and associated proteins [BR:
eja03036
]
138212189 (arid1b)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Helix-turn-helix
ARID
138212189 (arid1b)
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138212189 (arid1b)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138212189 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
138212189
NCBI-ProteinID:
XP_069028588
LinkDB
All DBs
Position
Unknown
AA seq
2127 aa
AA seq
DB search
MEPGRLGGRKGKNIDIRTSAAAAGIGPPPPPPPPPPSSSSHHTPPPFSYFIQQLHPQRQT
HNNNNNNNNNQQGRREVRGQSSGDRQHHGGTGSLLLVGDSRAEERHHQHQLNHTEEEEAE
EEQQRMDASPGSATNSTTTNPPPSGTSSEFNHYYGDGRGGPCFAQHGGQQSPGTGVTAAL
SVLGTMDQVQNSHEGYNNNSPYSHYPNYRPGYGGSGYGGMMSPSRQGSSPLGPAAANHSK
AAPAAASSPAGGGGFQRFPGQGQQGQQQQHPSGSTPTLNQLLTSPSPMMRGYGSGYSDYN
HPSAQQQPSLVLAKDTGSQYGSAAHGWAGQQRSHPAMSPGSTVQGGGRSQVPSMDPMAMK
RSQLYGMSNNPYSQQQGAPYPGQPYGSPSPHRYPMAMPGRGQMAMGAMQYPQQQMGSQFA
QQQQNVGGYCQPGQPPYFSPPQQQPAAPSQPPYMQPRPLPQQEVPQEAYGGRGQSAAMTP
GKPNHEEMSLSQQERPSSLPDLSGSIDDLPTGTEAAVSSGASGSGSAQGDQGTPTRSPFS
PHVSPRLPPLARAGPSPSPSPSPAGSRSGPMSPAAGGPGSQLTPQVSGPGPDVGPHSSQS
AMTQDRGFPPSLQRSTPAAQFGSQQSAPSMAPQPAPGGPVHHSSYQQGSHSYGQYGPPGN
YPRPPHYGGAPSANYSGPGPGSGLANSLGLNASSPMHGQGPSTPAGRGPGPGAGGRPYPT
GGGTMAPTSPGMPQPAGQGMGPLGPNASCKPPEVGPNAGPSANSSSSTGAQSRPPFARSP
VYHNQSWLGGRPALSPTLRPSHPQHHHHPPHPHPPPLHSQQGTGAHTPPEHYGQGSYPGL
APMGVMGPGGPYSQQPGGNSGRTTPQGPPYSGPSAGAMMMPADGTGPHGDAKQRVELSKE
GVGPASDSPKPKKPSVATMTNEKITRLYEMGSEPERRPWVDRYLSFMDERGTPVPNLPAV
GRKPLDLCGLYLTVREIGGLAMVNKNKKWRELSSLLNVGTSSSSASSLKKQYIQYLFAYE
CKVERGEEPPPETTGPAGDAKKPPSLQAKIQPPSPANSGSLQGPNTPQSSSSSSSLTEAP
GDLKPPTPASTPHSQMGPQPGNRILVSVQDPFSEGGDPAFHSKRGPGPGGAPYQQAGGPT
DPPVRIQYEANKDPYGGPRKGPGPGEAFGPGQMPSGAMQELYPRGPPSGPLTVMGPRPQY
PYGPGYERRPDHVMGPEGGMAPPGGQNSMGPSGNEAGMYPGNRYPHQRHGHDGYGQQYPH
GVAYTSHQPLYPQQQGYKRVMEGMYPPAKRHEGEAFGVQQFGSQQPDVFGPYGGGGGGYV
GPERRPVQGQYPYPYSRDCQGPPQHGMMGSGPPAASGGPGEGPQANMWHPRTDIGFTYSR
QGQGPPYPGMGRGDDQEGRAPQDNQWPPGHLSQRQPPYPSPSSSSSMPPLPSRQPPSSFQ
ATPTVPNHVTRSHSPSSSFPRPLGGSLSPNSAPYLPSIKKPGAPPSQGLPLVHREVSFPP
SSVEATPPKLKPRRRLTAKDTGTPDAWRVMMSLKSGLLAESTWALDTINIQLYDDSSVGS
FSLTQLPGFLELIVEIYRRCLIQIFGILEEYEVGSEGQKTLLGPLPEEEEEEEEEEEPPA
AASETDGQSTEEQRRSEETSPPLTAPEDETEDGKPAVKVEVKEEHREQAEPRPRQASKYD
KLPIRVEEKGEEWEEVEERWAKLSRPNGFISGLLHWEAGGGDSTEHIQTHFEPRMGGSTP
ERGRREGGGGGPEKETGKEEEEDSVERNLPEGTPQETQEKEQGCVSEVGGQRSPARSPIS
QQEDEPRCWDEAPLSTAESWQDSLAKRCVCVSNIVRSLSFVPGNDAVLSRHPGLVLILGR
LVLLHHHHPRRRRTRPAYQREEERGLACSRDEWWWDCLAALRENTLVTLANVSGRLDLSL
YPENICLPVLDGLLHWMVCPSAEAQDPFPSAGGGSALSPQRLVLECLCKLSIQDRNVDLL
LATPPFGRQRQLFSTLVRLVGERRSPVCREMAVAVLSNLAQGDPAAARAVALHKGSVATL
IGFLEDSVAAAQHQQNPLGAAAAPPEPPSVNMMCRAAKALLAMAKVEDNRTEFVLHESRL
LDISLSAALGSSVAAIMCEVLFKIGRS
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgggaggctcggcgggcgtaaagggaaaaacatcgacatcagaacaagtgct
gcagctgctggcattggacctcctcctcctcctcctcctcctcctccatcatcatcatct
catcacacacctccgccgttcagctactttatccagcagcttcacccccagcggcaaacc
cacaacaacaacaacaacaacaacaacaaccaacagggccggagggaggtgcgaggacag
agcagcggagaccgacagcaccatggagggacaggaagccttctcctggtgggggacagc
cgagcggaggagcgccatcaccaacaccagctgaatcacaccgaggaggaggaggcggag
gaggagcagcagcggatggatgcgagcccaggatcagccaccaacagcaccaccaccaac
cctcctccgagtgggaccagctccgagtttaatcattattatggggatggaagaggaggg
ccttgctttgctcaacatggcggacaacaaagcccagggactggggtaacagcggcgctc
tcggtactcggcaccatggaccaggttcagaactcccacgaaggctacaacaacaacagc
ccgtacagccactacccgaactaccgaccgggctacgggggcagcgggtacgggggcatg
atgagcccttcgcggcaggggagcagcccgctgggcccggccgccgcgaaccacagcaag
gcggctccggccgctgccagctccccggctggaggcggagggttccagcggttccccggg
cagggtcagcagggtcagcagcagcagcacccgtcgggctccacgccgactttgaaccag
ttattgacgtctccgagcccgatgatgcggggctatggaagcggatattcggattataac
catccttccgcgcagcagcagccgagcctggttctggccaaagacacgggctcccagtac
ggctcggccgctcacggctgggcgggacaacagcggagccacccggccatgagcccgggg
agcaccgtgcagggcggcggcagatcgcaggtgccgtccatggacccgatggcgatgaag
cgctcgcagctctacggaatgagcaacaacccgtactcccagcagcagggggcgccgtac
ccgggccaaccctacggctccccttccccccaccgatacccgatggcgatgcccggcaga
ggccagatggcgatgggagcgatgcagtaccctcagcagcagatgggttctcagttcgct
cagcagcagcagaacgtgggcggttactgccagccgggtcagccgccgtacttcagccct
ccgcagcagcagcccgccgcccccagccagccgccgtacatgcagccccgcccactgccg
cagcaggaggtgccgcaggaggcttacggggggcggggccagtctgccgctatgactcct
gggaaaccaaaccacgaggagatgagtctgagccaacaagagcgaccgtccagcctgccg
gatctgtccggctccatcgacgacctgccgaccggcaccgaggcggcggtgagttcgggg
gcgtcgggatccggcagcgctcagggcgaccaggggactccgacccgctccccgttctcc
ccccacgtctcgccccgcctccccccgttagctcgcgccgggccctccccctccccgtcg
ccgtcccccgccgggtcgcgatcggggccgatgtcccccgccgccggcggaccaggctct
cagctgacccctcaggtctccggtcccggaccagatgttggacctcactcctcccagtcg
gccatgactcaggacagaggtttccctccctccctgcagcgcagcaccccggcagcccag
ttcggctcccagcagtctgccccctcgatggcccctcagccggcgccgggggggcccgtc
caccacagctcctaccagcagggcagtcactcctacggccagtacggccccccaggtaac
taccctcggcccccccactacggcggggcccccagcgccaactacagcggacccggtccg
ggctccggcctggccaacagcctgggcttgaacgccagcagtcccatgcacggtcagggc
ccgtccaccccggcgggtcgcggcccggggcccggcgccgggggccggccttaccccacc
ggaggcggcaccatggcccccacctcccctggcatgccacagcccgctgggcagggcatg
gggcctctggggcccaacgccagctgcaaaccacccgaggtcggccccaacgccgggccg
agtgccaactcctcgtcctcgaccggcgctcagagcaggcctcccttcgcccgttcaccc
gtctaccacaaccagtcctggctcgggggtcgacccgccctctctcccacccttcgcccc
tcccaccctcagcaccaccaccaccctcctcatcctcaccctcctcctctccactcccag
cagggcaccggtgctcacactccccctgagcattatgggcagggcagctacccggggctg
gcaccgatgggggtgatgggccccggaggtccttacagccagcagccgggcggtaactcc
gggaggacgacgccgcagggacccccctacagcggcccctcggcgggcgccatgatgatg
ccggcggacgggacgggcccccacggggacgccaagcaaagggtggagctcagcaaagag
ggcgtcggccccgccagcgactcgcccaaacccaagaagcccagcgtggccaccatgacc
aacgagaagatcacacggctgtacgagatgggctcggagccggagaggaggccgtgggtc
gaccgctacctgtccttcatggacgagagggggacgcccgtccccaacctgcccgccgtc
ggccggaagccgctggacctttgcggactctacctgaccgtgcgggagatcggaggactg
gccatggtgaacaagaacaagaagtggcgggagctgtcgtcgctgttgaacgtggggacg
tccagcagctcggccagctctctgaagaagcagtacatccagtatctgttcgcctacgag
tgcaaggtggagcgaggggaggagcctccgccggagaccacggggcccgccggagacgcc
aagaaacctccgtcgctccaggccaagatccagccgccctccccagccaattcgggctcc
ttgcagggccccaacacccctcagtccagcagcagcagcagctccctgaccgaggccccc
ggggacctgaagcccccgacccccgcctccaccccgcacagccagatgggcccccagccg
ggaaacaggatcttggtgagcgtccaggacccgttttctgaaggcggcgacccggccttc
cacagcaagcgaggcccgggacccggcggcgccccctaccagcaggcaggaggtccaaca
gaccctcctgtgaggattcagtatgaagccaacaaagacccgtacggaggaccgaggaag
ggtccggggcccggcgaggccttcggtcccggtcagatgcccagcggtgccatgcaggag
ttgtaccctcgtgggccgccctcggggcccctgacagtgatgggaccccgaccccagtac
ccctacggccccggatacgagcggaggccggatcatgtgatgggtccagagggaggcatg
gcgccccccggaggtcagaacagcatgggtccgtctggaaacgaggccggcatgtatccc
ggcaacagatacccccaccagagacacggacacgacggttacgggcagcagtatcctcac
ggcgtggcctacacttcccatcagcccctgtaccctcagcagcagggctacaagcgtgtg
atggaggggatgtatccgccggcgaagcgtcacgagggcgaggccttcggcgtgcagcag
ttcggctcgcagcagcccgacgtgttcgggccctacggggggggaggcgggggctacgtg
ggccccgagcgccggcccgtccagggccagtacccgtatccgtacagccgagactgccag
gggcccccgcagcacggcatgatgggctcggggccgccggcggcgtctgggggtcccggg
gagggtccgcaggccaacatgtggcaccccaggacagatataggcttcacgtacagccgg
cagggccaggggcccccctaccccggcatgggccgaggggacgaccaggagggcagggcc
ccccaggacaaccagtggccccccggtcacctgagccagcgccagcctccctatccgtcg
ccctcctcctcctcctccatgccccccctgccttccagacagcccccctcctccttccag
gccacgcccaccgtccctaatcatgtgacccgttctcacagcccctcctcttccttcccc
cggcccctggggggctctctgtccccgaacagcgccccctacctgccctccatcaagaag
ccgggtgccccgccctctcagggcctccccctcgtccatagggaggtcagcttccccccc
agctctgtggaggccacgccccctaaattgaaaccacgacgacgattgactgccaaggac
acaggaaccccggatgcgtggcgggtgatgatgtcactgaagtccggcctattagcagag
agcacctgggcgctggacaccatcaacatccagctgtatgacgacagctcggtgggatcg
ttcagcctcacgcagctgccgggtttcctggagctcatcgtggagatttaccgccgctgc
ctcatccagattttcgggatcctggaggagtacgaggtgggatctgagggccagaagacc
ctgctgggacccctccccgaggaggaggaggaggaggaggaggaagaggagccgccagct
gccgcctctgaaaccgacggccagtcgacggaagagcagaggaggtcggaggagacttca
ccgccgctcacggctcctgaggacgagacggaagacggcaaacctgccgtcaaggtggag
gtgaaggaggagcacagggagcaggcggagccccgcccccgacaggccagcaagtacgac
aagctgccaatcagggtggaggagaagggggaggagtgggaggaggtggaggagcgctgg
gccaaactcagccgacccaacggcttcattagcggcctcctgcactgggaggccggagga
ggcgactccactgagcacatccagacacacttcgagccccggatgggaggctccaccccc
gagagagggaggagagaggggggaggagggggtccagagaaggagactggtaaggaggag
gaggaagacagtgtggagagaaatctgccagaaggaaccccgcaggagacgcaggaaaaa
gagcaaggctgcgtgtcagaggtcggaggtcagaggtcgccggctcggagtcccatcagc
cagcaggaggacgagcctcgctgctgggacgaggcgccgctgtccacggccgagtcctgg
caggactcgctggccaaacgctgcgtctgcgtgtccaacatcgtgcgcagcctgtccttc
gtccccggcaacgacgccgtcctgtcgcggcacccgggcctggtgctgatcctgggccgg
ctggtgctgctgcaccaccaccacccccgccggagacggacgcgccccgcctaccagcgg
gaggaggagcgaggtctggcctgcagccgggacgagtggtggtgggactgcctggcggcg
ctgcgggagaacacgctggtgacgctggccaacgtgtcgggccggctggacctgtcgctc
taccccgagaacatctgcctgccggtcctggacgggctgctgcactggatggtgtgcccg
tccgccgaggcccaggacccgttcccctcggcgggcggcggctccgccctcagcccccag
cggctggttctggagtgtctgtgcaagctgagcatccaggaccgcaacgtggacctgctg
ctcgccacgccgccgttcggccggcagcggcagctcttctccacgctggtgcgcctggtg
ggcgagaggcggagcccggtgtgccgggagatggcggtggccgtcctgtccaacctggcg
cagggcgacccggcggcggcgagggccgtcgccctgcacaagggcagcgtggcgacgctg
atcggcttcctggaggacagcgtggccgccgctcagcaccagcagaacccgctcggcgcc
gccgccgcaccgccggagccgcccagcgtcaacatgatgtgccgcgccgccaaggcgctg
ctggccatggcgaaggtggaggacaaccggacggagttcgtcctgcacgagagccggctg
ctggacatctcgctgtcggccgccctcggctcctccgtcgccgccatcatgtgcgaagtt
ctgttcaagatcggacgctcgtga
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integrated database retrieval system
