Embiotoca jacksoni (black perch): 138212190
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Entry
138212190 CDS
T10523
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eja03021
]
138212190 (taf1b)
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
138212190 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
138212190
NCBI-ProteinID:
XP_069028591
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MDDEHTAGYREPCAQCSAVAWGISEEGRFYCMSCHNVIERTKEVVDLTFMRGTTRVSTLG
KGQRTKKPERGHRWTICEGFQMILKNQADALLRLGVAPHFKEDVLRPLWRRYLQTSRQAY
TSDPVRRVTFRACGRNSDSDSAAESSAVSCSGTDRESNPPSNAGSGEESFNDWSGSEDAI
TYLMPRQRRSRGLMTMKKTLALIHLALMWSREALTLSDLLRLVKEGHVPYVNAYEQLPKE
MKVIGKDARLFNVKSVPSHQLVHKEAQSLGLFLQLPAFPPISRQTLLHPALLSLRYLMDA
NLPDELHLWVCRLMERAGMADQTLHTFDPSSRRALPRYDVQAAALIIVTMKVIFGLDDHT
EWDLSNEAGLQDNSGDMFNLRRWYRLLQAALIRGEQRRDRDIARKKWSADKPIFPSRKSK
WWIIKKKRIGEQVQKCFEKLSSCPVGVQEVSPSGFRFCWGDEDGSDGPSLHHMKLDAVVT
SKQNFRTPSNASYWHPPLRPCDRRSCSSSHYSEMEATLPRTFVWLLQLFSFLLDVKPSYM
YEEVLMVERLVLMNGTGTRTRTGTRASSRTPQTSQETEGES
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcacacggccggctacagggagccctgtgctcagtgttcggcggtggcc
tggggcatttcagaggagggtcggttctactgcatgtcctgccacaacgtcatcgagaga
accaaagaggtggtggacctgaccttcatgcgagggaccaccagggtctcaacgctcggc
aaaggacagagaaccaagaagccggagcgcggtcaccggtggacgatctgcgagggtttc
cagatgatcctgaagaaccaggcggacgctctgctccgactcggcgtcgcgccgcacttc
aaggaggacgtcctgcgtcctctgtggagacgctacctgcagacgagtcggcaggcgtac
acctccgaccccgtgaggagagtcaccttcagagcgtgcggccgcaactccgactccgac
agcgcggccgagtcctccgcggtgtcgtgcagcgggacggacagagagtcgaacccgccg
agcaacgccggctccggcgaagagagtttcaatgactggtcgggctcggaggacgccatc
acctacctgatgccccggcagaggcggagccgcggtctgatgaccatgaagaagacgctg
gctctgatccacctggctctgatgtggagccgcgaggcgctgacgctcagcgacctgctc
agactggtgaaagaaggtcacgtcccgtatgtgaacgcctacgaacaacttcctaaggag
atgaaggtcatcgggaaagacgcgcgcctcttcaacgtaaagagcgtcccgtcccaccag
ttggtgcataaggaggctcagtctctcggtctgttcctgcagcttcctgcttttcctcca
atcagccggcagactctgttgcacccagcgctgctcagcctgcgatacctgatggacgcc
aacctgcccgacgagctccacctgtgggtctgcaggctgatggagcgcgccggtatggca
gatcaaacgctccacacgttcgacccctcttcccgtcgcgcgctgccgcggtacgacgtc
caggccgccgccctcatcatcgttaccatgaaggtcatcttcggcctggacgaccacact
gagtgggatttatccaatgaagctggtctccaggacaactcaggtgacatgtttaacctg
aggaggtggtacagactgctgcaggccgctctgattcgaggtgagcagaggagagaccgc
gacatcgccaggaaaaagtggagcgcagacaaacctattttcccgagcaggaagtctaaa
tggtggatcatcaaaaagaaaagaatcggagaacaggtgcagaagtgtttcgagaagctg
tcttcctgtccggttggcgtccaggaagtcagtccgtccggcttccggttctgctggggg
gacgaggacggatcagacggtcccagtctgcaccacatgaagctggatgcagtcgtgacc
tcgaaacagaacttccggactccctcgaacgcctcgtactggcacccgccgctccgaccc
tgcgaccgccggtcgtgcagcagcagtcattactcggagatggaggcgacgctgccgcga
acatttgtctggctgctgcagctcttctccttcctgctcgacgtgaagccctcctacatg
tacgaggaggtgctgatggtggagagactagtcctgatgaacgggaccgggaccaggacc
aggaccgggaccagagcctcatccaggacgccgcagacaagtcaagaaactgaaggggaa
agctga
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