Embiotoca jacksoni (black perch): 138212378
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Entry
138212378 CDS
T10523
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04510
Focal adhesion
eja04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138212378 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138212378 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
138212378
NCBI-ProteinID:
XP_069028827
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MLQLQLAALLALQMFTCAQEGGASVSWAQEEVDFSEFGDMCTEGSCYPATGDLLIGRAHQ
LSSTSTCGLRRPEPFCIVSHLQEEKKCFVCDSATPYDKLADQMSGHRVENVVTTFAVNRL
KTWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAY
DCETSFPSVSQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNML
KITNLQVKFTRLHTLGDNLLDSRMEIKEKYYYAVYDMVVRGNCFCYGHASECAPIQAGHV
REGMVHGHCMCKHNTKGLNCEKCQDFHHDLPWRPAEGRSSNACKKCNCNQHSDSCHFDAA
VFEASGNVSGGVCDDCQHNAAGRQCEQCKPFYYQHPERDVRDPLICQPCSCDPVGSLNGG
ICDGMTDVRAGLIAGQCRCKVNVEGERCERCKQAHYALSDAPDGCEACSCSPLGTVPGGN
PCDNETGNCFCKRLVTGRDCDQCVSEHWGLSNDMDGCRPCDCDLGGAVNNRCDQVSGQCV
CRDHMFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVAVVPRPHPLDRSPTWTGMGLVS
VPEGAFLEFSVDNIPHSMEYDILVRYEPQLPDQWEEVLMTVMRPGPISADSRCINTVPDD
DNQMTSLHPGSRYATLPRSVCFESGLNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCK
NLDLFTASEGSDSSGDSGWDTFQRYRCLENSQSVVKTQMTDICRNFIFSISAMLHQGAKE
CQCDPQGSLSTVCDPSGGQCQCRPNVVGRNCDRCAPSTFQFGPNGCRACACDAQGSHGPF
CDQLTGQCSCVSGAYGRQCDRCLPGHWGFPTCRPCSCNGHADTCDPDSGRCIDCRDHSGG
HSCDRCLGGYYGDPVLGSGDHCRPCMCPDGPDSLRQFAGSCYRGDDSQQAICVCNTGYRG
ARCDECSPGYYGNPGEAGGRCQPCQCNNNINMLDPESCDGRTGECRRCLYHSEGDACQSC
KLGYYGNALLQNCRKCVCNQLGSNSSSCQSSGDCHCERNSGQCHCLSNVIGQHCDRCAAD
TWNMASGGGCQSCSCDPEHSYGTSCNEVSGQCSCSPGFGGRTCSECRELFWGDPEVKCHA
CDCDPRGISSLQCEKLSGLCVCVDGVSGPRCDVCARGFSGTFPDCRRCHQCFAEWDDIIG
QLTNQTHRLVNKVNAIKASGVGGPYRKSIESVERSAADIRLLLNQNPAAQPLSEVQHLLQ
QASDLMGALSRTLNLTEQTLVQVEDQDSAADAKLDSVTSDAQKLERTVQELLDQVEFIKN
SDIRGATDSVTKYFVQSEAAEARANASAVPVETSAALRQLTEDKMNQTRDEFLRRHTEHA
QRLDELAGELQTLDQSEISHKTCGSPSSGQDSCAPCGGLGCVDSEGRVRCGGDRCDGAVT
TANGVWRKARESEQEILSAMEEVEKLSKMVSEAKLQADEAKLSAQDVLMKTNRTKQKVDR
SNEELRSLIRQIRDFLTQDGADLESIELVANEVLAMQMPTSPGQLQNLTDEIRQKVGELG
HVETILQQSADDIQRAENLLDQARRASEEAAGVKASAQEVKRALQEAQRAQTAASSAIQQ
AAADIHNTNELLSSVESETVDAEVKLNNATQRLQKLEQDVTLLRDKAVNVTLSTELTNQD
AVSVGKMAEALKKDLDSELKGKYTTVEQLIGQKAGGVADAKKRAKSLQQEAKELLLQAGD
KLQLLRDLEKSYEDNQRTLEVKAEQLVELEAAVKELLREISHKVTVYGTCLS
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagcttcagctcgcggcgctgctcgctctgcagatgttcacctgtgctcaggag
ggcggggcctcagtgagctgggcccaggaggaagtcgacttctcagagttcggcgacatg
tgcaccgaaggcagctgttacccggcaacgggtgacctgctgattggtcgagctcatcaa
ctgtcatccacctccacctgtggactgagacgacccgaaccgttctgcatcgtcagccac
ctgcaggaggagaagaagtgcttcgtgtgcgactcggccacgccgtacgacaagttggcc
gaccagatgagcggccaccgagtcgagaacgtcgtgaccacgttcgctgtgaaccgactg
aagacctggtggcagtctgagaacggtctggagaacgtcaccatccagctgaacctggag
gccgagttccacttcacacatctcatcatgaccttcaagacgttccgacctgctgccatg
gtgatcgagcggtcagctgacttcgggaagacgtggcaggtttaccgctacttcgcctac
gactgtgagacgtccttcccgtcggtctcccagggtccgatgcagaaggtcgacgacgtc
atctgtgactcgcgttactccgacatcgagccgtccaccgagggagaggtgattttcaga
gttttggatccggtgttcaggatcgaagacccgtacagcccccggatacaaaacatgttg
aagatcaccaacctgcaggtgaagttcacccggcttcacacgctcggcgacaacctgctg
gactctcgcatggagatcaaagagaagtattactacgccgtctacgacatggtggtccga
ggaaactgcttctgctacggacacgcctccgagtgcgcccccatccaggccggccacgtc
agggagggcatggttcacggtcactgcatgtgcaaacacaacactaaaggtctgaactgt
gagaagtgtcaggatttccaccacgaccttccctggagaccggctgaaggtcgaagcagt
aacgcctgcaagaagtgtaactgcaaccagcactcggactcgtgccacttcgacgccgcc
gtgttcgaggcttcggggaacgtcagcggaggagtttgtgacgactgtcagcacaacgcg
gccggacgtcagtgtgaacagtgcaaaccgttttactaccaacacccggagagagacgtc
cgagacccgctcatctgccagccgtgtagctgtgaccctgtgggttctctgaacggagga
atatgtgatgggatgacggacgtccgagccggtctgatcgctggtcagtgtcgctgcaaa
gtcaacgtggagggagaacgctgcgagcgctgcaagcaggcgcactacgcgctgagtgat
gcgccggacggatgcgaagcgtgctcctgcagccccctgggaacagttcctggaggaaat
ccctgtgacaacgaaacaggaaattgtttctgcaaacgtctggtgacgggacgagactgc
gaccaatgtgtgtctgaacactggggtctcagtaacgacatggacggctgcagaccatgt
gactgtgacctcggaggagccgtcaacaaccggtgtgaccaggtgagcggccagtgcgtc
tgcagagaccacatgttcggccgccgctgtgatcaggtcgagtcgggcttctacttcatt
gctctggatcactacacctacgaggccgaggacgccaagtttggacctggagtggcggtg
gtcccgaggccccaccctctggaccgaagtcccacctggacgggtatgggcctggtcagc
gttcccgagggggccttcctggagttctccgtggacaacatccctcactccatggagtac
gacatcctcgtccgctacgagccgcagcttcctgaccaatgggaggaggttctgatgacg
gtgatgaggcccggaccaatcagtgccgacagccgctgcatcaacacggtgcccgacgac
gacaaccagatgacgtctcttcaccccggctcacggtacgcaactctgcccagatcggtt
tgttttgaatctggtctgaactacacggtccgcctcagcctgcctctgtactcggccctc
agtgacgtccagtctccgtacacgctcatcgactcgatcgtgttgatgcctcactgtaag
aacctggacttattcacggcctcagagggaagcgactccagcggggacagcggctgggac
accttccagcgttatcgatgtctggagaacagccagagtgtcgtcaagacgcagatgaca
gacatctgcaggaacttcatcttcagcatctctgccatgttgcaccagggagctaaagaa
tgccagtgtgaccctcagggctccctcagcactgtgtgtgaccccagtgggggtcagtgt
cagtgtcgccccaacgtggttggcaggaactgtgacagatgtgctccctccacgttccag
ttcggacccaacggttgcagagcgtgtgcgtgcgacgctcaggggtcacacggtccgttc
tgtgatcagctgaccggtcagtgttcgtgtgtttcgggggcgtacggccgacagtgcgat
cgctgtctgccgggtcactggggcttccccacctgccgaccctgctcctgcaacggacac
gccgacacctgcgaccccgacagcggacggtgcatcgactgcagggaccacagcggcgga
cacagctgcgacaggtgtctgggtggttactatggcgacccggtgttgggatcaggtgac
cactgtcgtccctgcatgtgtcctgacggcccagacagcctgcggcagtttgcgggaagt
tgttaccgtggcgacgacagccagcaggcgatctgcgtctgcaacacgggatacagaggt
gctcgctgtgacgagtgctcccctggttactatggtaaccccggggaggccgggggacgg
tgtcagccctgtcagtgcaacaacaacatcaacatgttggacccggagtcctgcgacgga
cggaccggagagtgccggcgctgcctgtaccacagcgagggcgacgcctgccagagctgc
aagctgggttactacggcaacgccctgctgcagaactgcaggaagtgtgtgtgtaaccag
ctgggcagcaactcctccagctgtcaatcatccggcgactgccactgcgagcgcaacagc
ggtcagtgtcactgcctctccaacgtgatcggtcagcactgcgaccgctgcgccgccgac
acctggaacatggcgagcggcggcggctgtcagagctgcagctgcgaccccgaacactcg
tacgggacgtcctgcaacgaggtcagcggacagtgctcctgtagccccggcttcggagga
agaacatgcagcgagtgtagagaactcttctggggagacccagaggtcaaatgtcacgcc
tgtgactgcgacccccgcggtatctcatccctccagtgtgagaagctcagcggtctctgc
gtgtgcgtggacggcgtttccgggccgcgctgcgacgtgtgcgctcgcgggttctcggga
acgttccccgactgccggcgctgccaccagtgcttcgccgagtgggatgacatcatcggc
cagctgaccaatcagacgcaccgactggtcaacaaggtcaacgccatcaaagccagcgga
gtcggcggcccgtacaggaagtccatcgagagcgtggagaggagcgccgccgacatccgg
ctcctcctgaaccagaacccggccgcgcagccgctcagcgaggtccagcacctgctgcag
caggccagtgacctgatgggagccctgagccggactttgaacctcaccgagcagactctg
gtccaggtggaggaccaagactctgctgcggacgccaaactggactcggtgacgtcggat
gctcagaaactggagcggacggttcaggagctgctggaccaggtcgagttcatcaagaac
tccgacatcagaggggcgacggatagcgtcaccaagtacttcgtgcagtctgaggcggcc
gaagctcgagccaacgcctccgccgtcccggtggaaacctccgccgcgctacggcaactc
acggaggacaaaatgaaccagaccagagacgagttcctgaggagacacactgagcacgct
cagaggctggacgagctggcgggagagctgcagactctggaccaatcagagatcagccac
aagacctgcggcagtccgtcctcgggtcaggactcgtgcgccccctgtggcggtctgggc
tgcgtggactcggagggtcgggtccggtgtggaggagacagatgcgacggcgccgtgacg
acggccaacggcgtctggaggaaggctcgagagtctgaacaggaaatcctcagcgccatg
gaggaggtggagaaactctccaagatggtgtccgaggcgaagctgcaggcggacgaggcg
aagctgagcgctcaggatgttctgatgaagaccaacagaaccaaacagaaagtggaccgg
agcaacgaggagctgcggagcctcatcagacagatccgagacttcctcacacaggacggc
gccgacctggagagcatcgagctggtggccaacgaggttctggccatgcagatgccgacc
tcgccgggtcagctgcagaacctgaccgacgagatccgtcagaaggtgggtgagctggga
cacgtggagaccatcctgcagcagagcgccgacgacatccagagggccgagaacctgctg
gaccaggcccgccgggccagcgaggaggcggccggcgtcaaggcctctgcgcaggaagtg
aagcgagctctgcaggaagcccagcgagcccagacggcggccagcagcgccatccagcag
gccgccgccgacatccacaacaccaatgagctgctgtcctccgtggagtcggagacggtg
gacgcggaggtgaagctgaacaacgccacccagaggctgcagaagctcgagcaggacgtg
acgctgctgagagacaaagcggtgaacgtcacgctgagcaccgaactgaccaatcaggac
gcagtgagcgtcggaaagatggcggaagcgctcaagaaggacctggactcggagctgaag
gggaagtacaccacggtggagcagctgattggtcagaaggcagggggcgtggccgacgcg
aagaagagggcgaagtcactgcagcaggaagctaaagagctgctgctgcaggccggggac
aagctgcagctgctcagagatctggagaagtcgtacgaagacaaccagcggactctggag
gtgaaggcggagcagctggtggagctggaggcggctgtgaaggagctgctgcgagaaatc
agccacaaggtcaccgtctacggcacctgcttgtcctag
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integrated database retrieval system