Embiotoca jacksoni (black perch): 138212449
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Entry
138212449 CDS
T10523
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138212449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eja03021
]
138212449
03036 Chromosome and associated proteins [BR:
eja03036
]
138212449
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138212449
Coactivators
SAGA/TFTC/STAGA complex
138212449
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138212449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
SH3_20
DUF5677
Motif
Other DBs
NCBI-GeneID:
138212449
NCBI-ProteinID:
XP_069028927
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLGDRKPPAASYSDGKPEAAAAAAGHFSGK
VRDQVGSAEQPQQGHPGAGLTPEPGAIEPLSGRTRTSSTSAAAAGAAGTAGASLQAVGAS
PPAASPGPGPVTSTAQPAAAASFQRAAVLGPSAAPGVPPAEASRTSSPGSLGVNGSTGAG
KLVNSPAVPPPAGAGSVISAVSGSAAPQPGFPVPQSSVGSPAAGLQRHPSPVTGVALNGV
DPKGAPTPAASTSQVMNHSNPLLHTKMLAPSQPATGSSVILTSTPPPAAAQSPISQTQTG
TSTPAAVSLKPTVNGVAVVRPAGAPVVAPTIQQQRPTGLVVGSTRAAAPQPALAVRPQQQ
TTIQLPPGFTMPAGMVLVRTETGQLVMVPQQVLAQAQAKTQQGQTVANITQRPATPTAGA
TIRVTTATTAPITHQTVRLASPSQTRMVQSTSTVQKALGVAPGGASVKMAAPQKAPTVIT
AGGVPGAKPAGVPSAPMAGASPATAPAGRVTVVSQEMQENVKKCKNFLATLIKLASHNSP
SPDTSKNVKALVQDLLDAKIEPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRQSLLSSQ
QSLVTAPPSTSAPPLAAPGSVTATAIRPRLPISPAGGAVRLNAPISNTTALALGRPGVQT
VQTRSPVVIGQTLRAQGAFVRGPTTIAGKSPMNLTAQANQKKLSDPGGGTFRDDDDINDV
ASMAGVNLNEENARILATSSELVGTKIRSCKDESFLPPGLLHRRILETAKKLGVTEVPLD
VVNFVSHATQSRLRSLLETVSAVAQHRSDGGKDEEHYEQSSDVRSQLRFFEQLERMEKQR
KDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKK
RKMDSPGGGATSGNEVASGSGSGSASSASPRQQLRQRITRVNLRDFIFCLEQDRSTARSL
LLYKALLK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtggacgagaaggcg
gtcagcgacctcgtcggctccctggaatctcagctgggcgaccgaaagcctcccgctgct
tcatattccgacgggaaaccggaggcagctgcggccgccgccggccacttctcagggaaa
gtgcgcgatcaagtggggtccgcggagcagccgcaacaagggcatccaggagcggggtta
accccggaacccggcgcgatcgagccgctctccggcagaacccgcacctcctctacctcc
gctgccgccgccggggccgcaggcaccgccggagccagcctacaagcagttggagcgtct
cccccggctgcctcccccggaccgggacccgtaacttcgaccgctcagcccgccgctgcc
gctagcttccagcgggcggctgtcctgggtccgagcgcggctcccggcgtccccccggcg
gaggcgtcccggacctcctctcccgggtcactcggtgtgaacggcagtaccggagccggg
aagttggtgaactcgcccgccgtccctccgcccgccggggccggctccgtgatcagcgca
gtcagcggctccgcggctccacagcccggcttccccgtacctcagtcctcggtgggctct
cccgctgcgggcctgcagaggcaccccagcccggtgaccggcgtcgccctaaacggggtg
gaccctaagggcgcccccacccccgccgcctccacctctcaggtcatgaaccacagcaac
cctctgctgcacaccaagatgctggcacccagccagcccgcgaccggcagctccgtcatc
ctgaccagcaccccccctccggctgccgcccagtcgcccatcagccagacccagacgggg
accagcacgccggcagccgtcagcctgaaacccaccgtgaacggggtggcggtggtgagg
ccagcgggagcccccgtggtggcccccaccatccagcagcagagacccaccgggctggtg
gtcggctccacccgggccgcagccccgcagccggcgctggccgtccggccccagcagcag
accaccatccagctgccgcccggtttcaccatgcctgcaggtatggttctggtccggacg
gagacgggtcagctggtcatggtcccccagcaggtcctggctcaggctcaggcgaagacg
cagcagggtcagactgtggccaacatcacgcagagaccggcgacgccgacggctggggcc
accatccgggtcaccaccgccaccacggctcccatcacccatcagaccgtccgcctggcc
tccccctctcagaccagaatggttcagtccacctccactgtacagaaggcgctgggcgtg
gcccccggcggtgcctccgtgaagatggcggctcctcagaaggctccgacggtgatcacg
gcggggggggtgcccggagccaagcccgccggcgtgccgtctgcccccatggccggcgcc
tcgcccgctacagcgcccgccggccgagtcaccgtggtgtcccaggaaatgcaggagaac
gtgaagaagtgcaagaacttcctcgccacgctcatcaagctggcgtcccacaactcgccc
tcccccgacacctccaagaatgtcaaggccctggtgcaggacctgctcgatgcaaagatt
gagcctgaggagttcaccactcggctgcaggctgaactgaagtcctccccacaaccctac
ctcatccccttcctcaagaaaagccttcccgctctccgtcagtcgctgctcagcagtcag
cagtctctggtgaccgccccccctagcacctctgccccccccctggccgcccccggctcc
gtcaccgccaccgccatcagaccgcggcttcccatcagcccggccggcggcgccgtccgc
ctcaacgctccaatcagcaacacaacagctctggctctgggcagaccaggagtccagact
gtgcagactcgtagtcctgttgtcattggtcagacgctcagagctcaaggtgcgttcgtc
agaggaccgacaaccatcgcaggaaaaagtcccatgaacctcacagctcaggccaatcag
aagaaactcagtgacccagggggcgggacgttcagagacgacgatgacatcaatgacgtg
gcgtcgatggccggcgtcaacctcaacgaggaaaacgctcgtatcctagcaaccagctcg
gagctcgtcggcacgaagatccgctcctgcaaagacgagtcgttcctgccgcccggcctg
ctgcaccgccgcatcctggagacggccaagaagctcggggtgaccgaggtgccgctggac
gtggtgaacttcgtgtcccacgccacccagtccagactgcgctccctgctggagacggtt
tcagccgtcgctcagcaccgctccgacggagggaaggatgaagagcactacgaacagtcg
tcggatgtccgctctcagcttcgtttcttcgagcagttggagcggatggagaaacagagg
aaagacgagcaggagagagagatcctgctgaaggccgccaagagtcgcgcccgacaggaa
gaccctgaacaggcccgtctgaagcagaaggctaaagagatgcagcagcaggagctcgct
cagatgcggcagcgagacgccaaccttacggcgctcgccgccatcgggccgcgcaagaaa
cgcaagatggactctccggggggcggagccacgtcgggcaacgaggtggcttcaggctcg
ggctcaggctccgcctcctccgcctccccccgccagcagctccgtcagcggatcacaaga
gttaacctcagggacttcatcttctgtctggagcaggaccgcagcacggcgcgctccctc
ctgctctacaaggcgctgctgaagtga
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