Embiotoca jacksoni (black perch): 138212538
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Entry
138212538 CDS
T10523
Symbol
nrde2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138212538 (nrde2)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138212538 (nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
DUF7269
Rib_recp_KP_reg
Phage_holin_7_1
Arteri_Gl
Motif
Other DBs
NCBI-GeneID:
138212538
NCBI-ProteinID:
XP_069029060
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MALFPAFAEVVSDQVEDSSRELDWLNNRSFQTGEALSLHGRFLETTKTETSVDREVSSAE
ENEGDGEGDVSSRKKKKKSEKKRKKKKKHKKKSGRCSDGSGSESDTVYPSDLKREQEADR
HQAAPLASCFSWLDDLRSPTEQPFCVDRKPDSANWTYKSLYRGDVARYRRKGSSSLGLDS
SRQGVSWEASETKKKQKGGDSKRAADRYFSAGSRQLLRSQPAVPLLPDCNHVTTSTAFLP
LGNDEGENKGGEKGDRLRTSSANPLGVYDSSTALWVQGRGPQDRQQEDTQPGEAAALLSG
RTEEFNRRLREQPEDAQLWIQFIRYQDELSAAAFGGEEEQQGGDSAERRKSSYRAVLEKK
LCIAERAVATNPVCIALQLERLRICQELWEPSVLAKEWKKLMFLHPNSAPLWREYLLFTQ
SYFSNFTVSRVNSAYGKCLSTLSAVRDGSMVSHPALPGVEEDLLDIFTQQCHFLRQSGHS
EKAVALFQAMIDFTFYKPDSVQKLSTKQQAEFFEPFWDSGEARVGEVGARGWKAWMLQQE
RGGWLLPSADEEEEEEEDEEEVKDSSLPRGTVWLDVESSRERAHWLPWRPDKTKNQSEED
CEDPDRQVLSDDIGPSLICLSSPELKLRLLLHFLAFLGLPVDPVLSAAPCQPGLLLENLS
LLTQGNELQLPLTSFDLPEPGVNSVGHMTTLQGTRKWVGLGKQGEKFVTNVFSMVQPVLP
PPHRAVLSLSWIQYEKVKVLRCLRSGNKKRLRSQGKSSKRVAKRLLKEPDNRSSLVLWRE
YGHLEWMLGNLDEARKVFSTATAMGGAKGLSSPTLCELSLLWSQLEVEDAAKEGGSRLAD
VTVSPAVCVLTRLAEGTSSSSSSSSQPLSTVSILKARRSYEQALTASLSALDQNVHDPPP
DRKEPEDLLGEKLRSSGLVGCFALFQYLTVSVQAANAVYSQARERMEEPHRTRTPGQQLD
RNAEGGVSAADSSRADGLCATRRAAEREVLAVQQAALLKHHSSVSVFPLVTLRQTLTSAL
SAWPCCAPLWNIYVQVENRYHSAGRARRFFHSVTRDNGSVVPRLFAIVAEQQRKQLVDAA
QRSCCRDDALPILPENGLSNRIRSLFESTIATETGAHCPLLWRMYIHFLVSEGKVDKAKG
IFYKALQNIPWVKGLYMDAVQLFPEHLQEFVDLMTEKELRLRLPLEELDILLED
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtttccagcgtttgccgaagttgtgagcgaccaagttgaagattcgtccaga
gagttggactggctgaacaacaggagcttccagacgggggaggccctgtcgctccacggt
cgttttctggagacgaccaagacagaaacgagtgttgacagggaggtgagctccgcagag
gagaacgaaggggacggagagggcgacgtgtcgtccagaaagaagaagaagaaaagcgaa
aagaagaggaagaagaagaaaaagcacaaaaagaagagcgggaggtgttcggacggcagc
gggtccgagtcggacaccgtctacccgagtgatctcaaaagggaacaggaggcggacaga
catcaggccgctccattagcaagttgtttctcgtggctggatgacctccggtcgcccaca
gagcagccgttctgcgtggaccgtaaaccggactcggccaactggacctacaagtcgctg
tacagaggagacgtcgcccggtacaggaggaaaggcagctcgtcgttgggtctggactcc
tccagacagggagtcagctgggaggcttcagagaccaaaaagaaacagaaaggaggagac
agtaaacgagcggcagacagatatttttctgcgggcagccggcagctgctgaggtcccaa
cccgccgtccctttattaccagattgtaatcacgtcaccacctccaccgctttcctccct
ctgggcaacgatgagggggagaacaaaggaggagagaaaggtgacagactgcgcacatca
tcagcgaatcccctcggtgtgtacgactcctccacggccctgtgggtccaggggagagga
ccgcaggaccggcagcaggaggacacgcagccgggggaggcggctgcgcttctgtccggg
aggactgaagagttcaacaggcggctcagggaacagccagaagacgcccagctgtggata
cagttcatacgataccaggacgagctgagtgccgcagcgtttggaggcgaggaggagcag
caaggcggcgactcagcggagcgccgaaagtcctcctacagagccgtcctggaaaaaaag
ctgtgcatcgctgagcgtgccgtggccaccaaccccgtctgcatcgctctgcagctcgag
aggctcaggatctgccaggagctctgggagccttcggttctggctaaagagtggaagaaa
ctgatgttcctccacccaaacagcgcccccttgtggagggagtatctgctcttcacccag
agctacttcagcaacttcactgtgtcgagggtcaactcggcctacgggaagtgtctgagc
acgctcagtgctgtgcgggacggaagtatggtctctcatccggctctgccaggagttgaa
gaggacctgttggatatcttcacccagcagtgtcatttcctgcgtcagtctggtcactca
gagaaggcggtcgctctgtttcaggccatgatcgactttactttctacaaacctgacagt
gttcaaaaactttccaccaagcagcaggctgagttctttgagccgttctgggacagcggt
gaggcgagagtcggggaggtgggggcccgaggctggaaggcatggatgctccaacaggag
cgaggaggctggctgctgcccagtgcagatgaagaagaggaggaagaagaggatgaagag
gaggtgaaggacagcagcctgccgagagggacagtctggttagacgtggagtcgtctcgt
gagagggctcactggttgccgtggagaccggacaaaaccaagaaccagtcagaggaggac
tgcgaggaccctgacagacaggtgttgtctgatgacatcggtccgtccctgatttgtctg
tcttcaccagagctcaagctccgtcttcttctccacttcttggccttcctgggtctgcct
gtcgacccggtgctctctgctgccccctgtcagcccggcctgcttctggagaacctttct
ctgctcactcagggcaacgagctgcagcttcctctgacctcgttcgacctacctgaacca
ggggtgaactctgtaggtcacatgaccaccctccagggaacgaggaagtgggtggggctt
gggaagcagggtgagaagtttgtcaccaacgtgttcagtatggtccagccggtccttcct
cccccccaccgagccgtcctgtcactcagctggattcagtacgagaaagttaaggtcttg
cgctgcctgcgcagcggcaacaaaaagcgtcttcgctctcagggcaagagcagcaagcgc
gttgccaagcgactgctcaaagaacccgacaaccgttcctccttggtgctgtggcgggag
tacggccacctggagtggatgctgggcaacctggacgaggcccgcaaagtgttctccacg
gcaacggcgatgggcggagccaaagggctgagcagcccgactctgtgcgagctgagcctg
ctgtggtcccagctggaggtggaggacgcagccaaagagggaggaagccgactcgccgat
gtgacagtgtctccggctgtgtgcgtgctgactcggctagcagaaggaacctcctcatcc
tcctcttcatcctcccagcccctctccacggtttccatcctgaaggccaggagatcctat
gaacaggctctgactgccagcttgtcagctttggaccagaacgtccacgatcctccgccc
gacagaaaagagccagaggaccttctcggagagaagctgaggtcgagcggtctggtcggc
tgcttcgctctctttcagtacctcacagtgagcgtccaggctgccaacgctgtgtacagt
caggccagagagaggatggaggaaccgcaccgcacgcgaacacctggacagcagctggac
cgtaacgctgaaggcggcgtctctgccgccgattccagtcgtgccgacgggctgtgtgcg
accaggcgagctgctgagcgtgaggttttagcagtgcagcaggcagcgctgctgaaacat
cacagcagcgtcagtgtgtttccgctggtcacgctgagacagacgctgacctctgctctc
tcagcctggccctgctgcgcccccctctggaatatttatgtacaggtggagaatcgttac
catagcgctggcagggcacgtcgtttttttcactctgtaaccagggacaatggcagcgtg
gtgccacgcctctttgccattgttgccgaacaacaaaggaagcagctggtggacgctgct
cagagatcctgttgccgtgacgatgccttgcccatcttgccagagaatggcctcagcaac
cgtatccgtagcctgtttgaaagcaccatagcaacagagacgggtgctcattgtccttta
ctttggaggatgtacatccacttcctggtgtcagaaggaaaggtggataaagccaaaggg
atcttctacaaggccttacagaacatcccctgggttaagggtttgtacatggatgcagtg
cagctgttccctgagcatctgcaggagtttgtagatctgatgacggagaaagagctccga
ctgagactgcctttagaggaactggatatactactggaagactga
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integrated database retrieval system
