Embiotoca jacksoni (black perch): 138212636 Help Entry 138212636         CDS       T10523                                  Symbol col4a3 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism eja  Embiotoca jacksoni (black perch) Pathway eja04382   Cornified envelope formation eja04510   Focal adhesion eja04512   ECM-receptor interaction eja04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:eja00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     138212636 (col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     138212636 (col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     138212636 (col4a3)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     138212636 (col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:eja04147]     138212636 (col4a3)    00536 Glycosaminoglycan binding proteins [BR:eja00536]     138212636 (col4a3) Exosome [BR:eja04147]  Exosomal proteins   Exosomal proteins of other cancer cells    138212636 (col4a3) Glycosaminoglycan binding proteins [BR:eja00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    138212636 (col4a3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  138212636 NCBI-ProteinID:  XP_069029188 LinkDB All DBs Position Unknown AA seq 1665 aa AA seqDB search MDAPGGPRRRSVPLLVLLLCCSAAPGHAERVSERTPGTGSELMEVCHCSGKSLCHCDGVK GQKGEPGYLGYNGLPGVIGYPGNEGHQGSPGEKGEHGAGGSPGLKGSRGLPGKPGFPGPP GLPGLPGHEGAIGRPGLPGCNGTKGDGGYPGFSGVPGPAGLRGREGPRGEKGHSFIFPEA PDIKGAAGPRGPDGEKGLSGDPGELGLPGPPGPAGLPGSPGLPGLPGEKGQEGPSPVIPG PRGQKGDRGPPGIPGQKGIKLYAEGPKELKGEPGETGEKGCRGFPGVPGKAGVKGEKGEG GDPGSLGKPGKDGPPGELGEQGDRGDRGYLGPPGIEGATGEKGDQGPPGLQGETVLKHKF LKGQRGVAGPRGPPGVPGEQGIIGFPGLQGETGLGLPGPPGLQGLPGSFGPKGEPGEPAP YIIGPPGQNGVPGGHGAEGEPGEPGIPDLLGEVSSPGAKGPKGVTGLPGYRGENGQMGQK GELCLACTFFPGLPAPSGEPGEPGETGLTGSVGLPGPKGHKGVRGVTGRPGAQGPFGFSG SPGSPGPAGDPGVMQRVGQKGEDGALGESGPPGLEGMDGRPGLPGPKGVLGQKGNPGPPG PKGERGPLGETGPRGLTGQTGPAGPPGIGAPGPQGSKGNVGVLGEPGEPGAPGGKGSPGE IRTYPGDPGQKGEKGLSGNPGPEGGTGPPGDPGFVGPKGKKGDKGFSVQGPPGFPGVKGA KGPPGAPGLPSFGIKGRAGPSGPPGMPGPKGDGGIGFPGQQGQSGPQGEDGSVGPQGNPG PQGLDGVPGPAGQDGLPGPKGRSGLDGIPGPVGSVGPCLPGAPGTEGERGLRGVVGFTGS QGLQGVQGDPGLLGVGALGPQGPYGTPGLDGALGPVGGVGPKGLRGTNGEPGSPGIRGDT GPPGPTGGPGGDGKSGDTGRPGPKGETGSEGTRGFQGPPGPQGDRGETGPKGIQTDVVMY GDPGNPGYPGPTGLTGTRGAAAPPGPQGPEGSSGGPGGTGPQGLPGGPGRDGEKGSSGPS GLPGNQGDMGRPGCRGEKGVKGPCGAPGSEGSPGREGPQGPRGEPSPPGPGPKGCPGEKG NAGCSGPAGEQGAPGDPGSSGPPGECGPCGPEGASGAPGCRGAPGSPGEKGCDGPPGNDG PPGPTGLTGNKGAPGDPGPAGPRGNQGQDGIPGPPGEKGSMGAPGVGPRGLEGKKGPAGC PGEEGPPGSCGPPGPSGPAGQPGCSGSPGSPGPPGHPGREGVCIEGAKGEKGFPGGRGPK GPPGSPGPPGPPGPGFKGEKGHKGVTGDTGPPGCTGDTGPEGKPGTDGPPGPPGSKGVRG ETGLQGPVGLKGEAGPPGFYGSQGPPGPPGRRGPRGQDVTREVVLQPGDQGPAGDHGPPG EGGLPGAQGIPGAPGLKGNSGNGGKRGQCGHPGLKGDRGDRGFPGRKGVAGLSGPVGAKG GPGQQGGPGNPPEKNGFLFTKHSQELFVPQCPAGSTLIYSGYSLLFINGNNRAHGQDLGT LGSCLPRFSTMPFLFCNTDNTCRYASRNDYSYWLSTNEPLSGSLPFISEESLKNHISRCS VCEARANVIAVHSQTSSVPSCPSGWDSLWFGYSFVMETGVGAEGSGQPLASPGSCLETFR KIPFIECHGRGTCNFYTDSYSYWLAALNPNDMFSPPAVNQPRGVM NT seq 4998 nt NT seq  +upstreamnt  +downstreamnt atggatgctccgggcggcccgagacggaggagcgtcccgctgctggttctgctgctctgc tgctccgccgctccgggacacgctgagagggtgagcgaacgcaccccggggacagggtcc gagttgatggaggtgtgccactgcagcgggaagtctctctgtcactgcgatggggtcaaa ggtcaaaagggtgaacctggttaccttggatacaatggacttcctggagtcatcggttac cctggaaacgagggtcatcagggctcacctggagaaaagggcgaacatggagcaggagga agtccaggactgaaaggctctcggggtcttccaggaaaacccggtttcccaggacctcca ggactgccgggactccccggacatgaaggagcgattggccggccaggactcccaggatgc aacgggacaaagggggacggcggttacccagggttctctggggttccaggacctgccggc ctgcgaggccgcgaggggccacgaggcgagaagggacactccttcatatttccagaagct ccggacattaaaggggcagcaggaccacgaggacccgatggagaaaaagggctgagtgga gatccaggtgaactgggtctgccgggaccaccgggacccgccggacttcctggaagtcca gggttgccggggttaccgggagagaagggtcaggagggtcccagtccggtgattccgggt cctcgaggacagaagggtgatcgtggacctccagggattcctggacagaaaggaatcaaa ctttatgctgaaggaccgaaagagctgaagggggaaccaggtgagaccggagagaaaggt tgtcgtggatttcctggtgtgccgggtaaagcgggagttaaaggagagaagggcgagggc ggcgaccccggctcactgggtaaaccgggaaaggacggccccccgggagaacttggagaa cagggtgaccgcggtgaccgcggctatctcggccccccggggatcgaaggggccacggga gagaaaggagaccaaggacctccgggtctacagggggagacggttctgaaacacaaattc ctgaagggccagcgtggtgttgccgggcctcgtggacctccaggagtccccggagagcaa ggaatcatcggttttcctggactgcagggtgagacaggtttgggtcttcctggtccaccg ggtcttcagggactgcctggttcatttggacccaaaggagaaccaggtgagccggcgccc tacatcatcggccccccggggcagaacggagtcccgggaggtcatggagctgaaggagag cccggagaacctggaataccagacctcctgggagaagtcagtagtccaggagccaaagga ccaaaaggtgtgacgggacttcctggctacagaggggagaacggacagatgggccagaag ggggagctgtgtttggcctgtactttttttcctggactccccgccccctcaggtgaacca ggagagccaggtgaaaccgggttgacaggttcggtcggtcttccaggacccaaaggtcat aaaggggtcagaggagtcacaggacgacctggtgcacagggcccctttggtttctccggc agtccggggtccccgggaccagctggtgacccgggagtcatgcagagggtgggacagaag ggtgaggacggggccctgggagaatcgggaccaccaggactcgaggggatggatggacgt ccaggacttccaggaccaaaaggtgttttgggacagaaaggaaaccctgggcctccgggg ccaaaaggtgaaaggggtccactcggggaaactggtcccagaggcctgacgggacagacg gggcctgcaggacctcctgggatcggggctccggggcctcaaggatctaaaggcaacgtg ggagtcctgggagaaccaggagaacctggagcaccaggtggaaaaggttctccgggggag atcagaacttatccaggagatccgggccagaaaggagagaaaggtttatctgggaacccg ggacctgaaggtggcactggacctcccggggatccaggatttgttggtccaaaggggaaa aaaggagataaaggcttttctgtccaggggcccccaggcttcccaggggtcaaaggagcg aagggtcctccaggagctccaggtctaccgagcttcggcatcaagggacgagcggggccg tcgggccccccggggatgccggggccaaagggagacggaggtattggtttcccaggccag cagggccagtcgggccctcagggggaagatggctccgtgggaccccaaggaaaccctgga cctcaaggactagatggagtcccaggacctgcaggacaagatggtctaccaggacccaaa ggtcgtagcggcctggatggcatacctggtcctgttggttctgttggaccctgtttacct ggagctcctggaactgaaggagagcgaggactgaggggcgtcgtcgggttcacagggtcc cagggcctgcagggggtgcagggggaccctgggctgctgggtgtgggagccctgggccct caggggccatatgggaccccagggcttgatggagctctgggaccagtaggaggtgtagga ccgaagggcctgagagggaccaatggggagccaggaagcccagggatccgaggggacaca ggtcctccggggccgaccggcggtccagggggtgacgggaaatcaggagacaccggacga cccggaccgaaaggtgagacgggctctgaggggacgaggggcttccaggggcctcctgga cctcagggggaccgaggagaaaccggtccaaaggggatccagacagacgttgtgatgtat ggagatcctggaaaccctggataccccgggcccacagggctcaccggcaccagaggagcg gcagccccgccgggcccccagggccctgaaggcagcagcggtggacccggcggcaccgga ccacaaggacttcctggaggaccgggaagagatggagagaaaggttcttctggtcccagt ggacttcccggtaaccaaggagacatggggaggccaggttgtcgaggtgagaaaggtgtg aaagggccctgtggggcccccggttcagaaggaagtccaggacgagaggggcctcaaggt cccagaggagaaccaagtccaccaggaccaggacctaagggatgtccaggagagaaggga aatgcaggatgttccggacctgcaggggagcagggagcaccaggagaccccgggagctcc gggcctccaggagaatgtggcccctgcggccccgagggagcttctggagcaccgggctgc cgaggtgctcctggttctcctggtgaaaagggttgtgatggtcctccggggaatgacggg cctccgggaccaacgggcctcacaggtaacaagggggctcctggagatcctggtccagct ggtcccagaggaaaccagggccaggacgggattcctggacctcctggagagaaaggatcc atgggagcgccaggagtcggacctcgaggactggaggggaagaaaggtccagctgggtgt cccggagaggagggccctccaggttcctgtgggcctcctggtccctctggtcctgcagga caaccggggtgctccggttctcctggatctcctggtcctccgggtcatcccggcagagag ggagtctgcatcgaaggagccaagggagaaaaaggattccctggaggacgaggacccaaa ggtccaccaggctctccaggtcctcctggtcccccgggtcctggttttaaaggagagaag ggacataaaggagtaacaggtgacacaggaccaccgggttgcaccggtgacaccggccca gaaggcaagccgggtacagacggacctccaggaccacctggatccaaaggcgtgagagga gaaactggtctccaaggacctgttggtctgaagggggaagccggaccgccaggtttctac ggctcacagggacctccgggaccccctggtagaagaggaccgaggggtcaggacgtaacc agagaggtggtgctgcagcccggagaccaaggtccggctggagatcatgggcccccagga gaaggaggactcccgggggcccaagggatacctggagctcctggtttgaagggcaacagt ggcaacggtggtaaaagaggacaatgtggtcatcctggactgaaaggggatcgaggtgac cgagggttccccggacggaaaggtgttgcaggtttaagtggtccagtcggtgctaaaggt ggtcctggccaacagggcggtcctgggaacccacctgagaagaatggcttcctgttcacc aaacacagtcaggaactcttcgtcccacaatgccctgcaggatccacgctcatctacagc ggatactcgctgctgttcatcaacggaaacaaccgagcacacgggcaggacctgggtacg ttaggcagctgtttacctcgtttcagcacgatgcctttcctgttctgtaacaccgacaac acctgccgctacgcctcccgcaacgactactcctattggttgtccaccaacgaacccctt tcaggcagcctacccttcatctccgaggagtctctaaagaaccacatcagccggtgttcg gtctgtgaggccagagccaacgtgatcgccgtccacagtcagaccagctcggtaccatcc tgcccctccgggtgggactcgctctggttcggttactccttcgtgatggaaacgggagtg ggggcggaggggtcgggtcagcctctggcctcacctggatcctgtctggaaacctttcgg aagattcccttcatcgagtgtcacggcagaggaacctgcaacttctacaccgactcctac agctactggctggcggcgctcaaccccaacgacatgttcagcccaccagctgtcaatcaa ccgcgcggcgtcatgtga

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