Embiotoca jacksoni (black perch): 138212738
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Entry
138212738 CDS
T10523
Symbol
rnf2
Name
(RefSeq) E3 ubiquitin-protein ligase RING2 isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138212738 (rnf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eja04121
]
138212738 (rnf2)
03036 Chromosome and associated proteins [BR:
eja03036
]
138212738 (rnf2)
Enzymes [BR:
eja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138212738 (rnf2)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138212738 (rnf2)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
138212738 (rnf2)
Noncanonical PRC1 (PRC1.1)
138212738 (rnf2)
Noncanonical PRC1 (PRC1.3/1.5)
138212738 (rnf2)
Noncanonical PRC1 (PRC1.6)
138212738 (rnf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
RAWUL
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-Nse
zf-RING_4
zf-RING_5
zf-rbx1
zf-RING_6
zf-UDP
TRAF3_RING
zf-C3HC4_5
CAMSAP_CC1
Motif
Other DBs
NCBI-GeneID:
138212738
NCBI-ProteinID:
XP_069029354
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MTQTVQTNGVQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN
TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARISKHNNQQALSHSIEEGLKIQAMTRLQRGKRHTVENGSGAEDNGDSSHCS
NASVHSNQEAGPSIKRTKTSDDSGLDMDNAAENGGGDSVIDGGASEIELVFRPHPTLMEK
DDGHNSVEFVPRYIKTSGNATVDHLSKYLAVRLALEELRRNAEASPVNVEAASEKQYTIY
IPTAGNQFTVSTCIRRDMTIMHIPHPTFAADFQTLTESTIFCCVLCSMSTQPTIFI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacagttcagaccaacggggttcaacctctcagcaagacctgggaactaagt
ctgtatgagctacagagaactccacaggaggctataacagatggactggaaatagcagtg
tcgcccaggtccttgcacagcgagctcatgtgccctatctgtctggacatgttgaagaac
acaatgacgacaaaagaatgtctgcaccgcttctgcgctgattgtatcatcacagctttg
agatctggtaacaaagagtgtcctacctgtcgtaagaagctggtgtccaagaggtcgctg
cgtccagacccaaactttgacgcgctcattagtaagatttatcccagccgtgatgagtat
gaagcccatcaagagagagttttggcccgcatcagcaaacacaacaaccagcaagccctg
tcccacagcatagaagaggggctaaagatacaggccatgaccagactgcagcgtggtaag
cgacacacggtggaaaacggcagcggagcggaggacaacggcgactcctcccactgtagc
aacgcttccgtccacagcaaccaggaggcaggtccgagcatcaagcgcacaaagacgagt
gacgacagtggtttggacatggataacgctgctgagaatggaggcggggactccgtaatt
gacgggggggccagcgaaatagagttggtgtttcggccacatcccaccctgatggagaag
gacgatggtcacaatagtgtggagtttgtcccgcgctacattaagacatccggaaatgct
acggtggatcacctgtctaaatacttggctgtccgactggctctggaggaactaagaaga
aatgcagaggccagtcctgtgaatgtggaagcagcttcagagaaacaatacacaatctac
atacctactgctggaaaccagttcactgtgagtacatgcatacgaagagacatgacaatc
atgcacatccctcatcctacatttgctgcagattttcagactttaacagaaagcaccatt
ttttgctgcgtactctgcagtatgtccacacagcctaccatatttatataa
DBGET
integrated database retrieval system
