Embiotoca jacksoni (black perch): 138212942
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Entry
138212942 CDS
T10523
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04148
Efferocytosis
Brite
Membrane trafficking [BR:
eja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138212942 (tgfbrap1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR-S
Motif
Other DBs
NCBI-GeneID:
138212942
NCBI-ProteinID:
XP_069029770
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MSVKAFELVPAVERDLLMGDKARINIECIECCGKHLYVGTNDCFIHHFLLDEVSSSKGKL
SYVAQKLLHKYLGLKKPVAELRAASALERLIVLCDGIVFLVDMGTLETVPSAAGGGAKIR
SVTAFCINENPVNGEPFCVEMGVLSSKRRTVQIYMVYEDRVQLVKEVTTPEQPCAVSLDG
YFLCLALTTQYMIFNYNTGASQDLFPYNSEERRPIVKRISREEFLLAAPGGLGMFANAEG
ISQRAPVNWSESVIGAAVCFPYVVALDESFITIHSMLDQQLKQTLSFRDGHILQDFEGKV
ILASTKAVYVLVPLPLERQIQDLLASHRVEEALVLTEGAQRNIPKDKFQILHKRILQQAG
FIQFGQLQFLEAKEHFRKGQLDVRELISLYPLLLPASSSFSRCHPPLHEFADLNHLAQGD
QGKVLQCKKFLISYLGEVRSTEVANGCREDVDTALLKLYAEQDHESLLDLLASENACVLA
DSVPWLEKYHKYFALGLLYHYNGQDSAALQLWIRVVDGELQDATRSDLYEYIVDFLYSSS
NLDLVWKYADWALRKDPTIGVHIFTKRPAGKDQSELNHDDVITYLEKHSGALLLYLEHLV
LGRRIQKEKFHTHLAVLYLKRVLSLLSESPTDEEQLTKARERLQALLRESSLYRVQYLLG
KMEDCEQLMLERATLHGKLEEHDKALHILVHKLRDFPSAEAFCTWASSCRDAAYRQQLFH
LLLEVYLDGSVSERAQTAAGGGSGELEMAAVDLLNRHGEVFDGARVLRMLPDGWSLQLLR
PFLGRAVRASMHTCRTTRIAVGLAHSENLQLLHDRLKERKKPIFVSEKKGCHLCHNTFSE
PSVVCLPGGVPVHTHCVAQRVRDSPTKRQLTNSSNHT
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaaggcttttgagcttgtccccgctgtggagcgagacctcctcatgggcgac
aaagctcgcatcaacatcgagtgcatcgaatgctgcggaaagcacttgtacgtgggcacc
aacgactgcttcatccaccatttcctgctggacgaggtctcttcctccaaagggaaactg
agctacgtggctcagaagctgctgcacaaatacctgggcctcaagaaaccagtggctgag
ctgcgggccgcttctgctttggagcgtctgatagtgctctgcgatgggatcgtgttcctt
gtggacatggggacgctggagaccgtgccctctgcggcaggaggcggagccaagatccga
agcgtgacggcattctgcatcaacgagaacccggtgaacggggaacccttctgtgtggaa
atgggcgtcctctcctccaagcggcggaccgtgcagatttacatggtgtatgaggacaga
gtgcagctggtcaaagaggtgaccactcccgagcagccctgcgccgtcagtcttgatggt
tacttcttgtgcctggctctcacgacgcagtacatgatctttaattacaacacgggagcc
tcccaagacctcttcccgtacaacagcgaggagaggaggcccatcgtgaagaggatcagc
cgggaggagttcctcttagcagctcccggtggtctgggaatgtttgccaacgcagaaggg
atttctcagcgggctccggtcaactggtcggagagcgtgatcggtgccgccgtgtgtttt
ccctacgtggtggctttggatgagagcttcatcaccatccacagcatgttggaccagcaa
ctcaaacagaccctttcgttcagggatggacacattctgcaagactttgaagggaaggtc
attctggcttcgactaaggccgtgtacgtccttgttccgctgccgctggagaggcagatt
caagacttactggccagtcacagagtggaggaggcgctcgtcctcacagagggagcacag
aggaatattcccaaagacaagttccagatattgcacaaaagaatcctccagcaggcaggt
ttcatacagtttggccaacttcagtttctggaagcaaaagaacacttcaggaagggtcag
ctggatgtgcgggagctgatatcgctctacccgttactgctgcctgcttcatcttcgttc
agccgctgccaccctcctctccacgagtttgcagatctcaaccacctcgcgcagggcgac
caaggcaaagtgctgcaatgcaagaaattcctcatcagctatttaggagaggtacgaagc
acagaggtggcgaacggctgcagagaggacgtggacacggcgctgttgaagctctacgct
gaacaggatcacgagagccttctagacctcctcgcttcagagaatgcctgcgtgctagca
gacagcgtcccatggctggagaaatatcacaaatattttgcacttgggctgctctatcat
tacaatggtcaggattcagcagcacttcagttgtggattcgtgtagttgatggggagctg
caggatgccacaagatctgatctgtacgagtacattgtggactttctctactcttcctcc
aatctggaccttgtatggaagtacgcagactgggccctgcggaaggatcccaccataggt
gtccacatctttactaagaggcctgccgggaaagatcagtcagagttgaaccacgatgat
gtcatcacttacctggaaaagcacagcggggcgttgcttctctacttggaacacctggtg
ctggggagacggatacagaaggagaagttccacacacacctggctgtgttgtacctgaag
agggttttgtcgttgctgtcagagtcgccaacagatgaagagcagctgaccaaagcgaga
gagagactccaggctctgctcagggagtccagcctgtaccgtgtacagtatcttttaggt
aaaatggaggactgtgaacaactgatgctcgagcgtgcgacactgcacggaaaactagag
gagcacgacaaagcactgcatatcctggtgcacaagctcagagacttcccgtccgctgag
gccttctgtacgtgggcctcctcttgtcgagacgccgcgtaccgtcagcagctcttccac
ctgctcctggaggtctatctcgatgggagtgtttctgaaagagctcagacggcagcagga
ggtggcagcggcgagctggagatggcggcagtggacctcctgaaccggcacggcgaggtg
tttgatggagcgcgtgtcctgcgaatgctccccgatggctggtcgctgcagctgctgcgg
ccctttctgggtcgagccgtaagggccagtatgcacacctgccgcaccacccgcatcgct
gtgggcctcgcccactctgaaaacctccagctgctgcatgacaggttgaaagagcgtaag
aaacccatctttgtgtctgaaaagaagggatgccacctgtgccacaacaccttcagtgag
ccgagcgtggtgtgtctgccgggcggagttcccgtccacactcactgtgtcgcacagaga
gtaagagactctcccacaaagagacagttgactaatagcagtaaccacacgtga
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