Embiotoca jacksoni (black perch): 138213005
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Entry
138213005 CDS
T10523
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eja03009
]
138213005 (ddx21)
03036 Chromosome and associated proteins [BR:
eja03036
]
138213005 (ddx21)
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138213005 (ddx21)
Ribosome biogenesis [BR:
eja03009
]
Eukaryotic type
Pre-60S particles
Helicases
138213005 (ddx21)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
138213005 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138213005
NCBI-ProteinID:
XP_069029900
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MPSKIIFESEDPIMEEDADTVAVAKTPNSKTKEGKKLKKKKQQVEEQEHPDCDPPTPKKK
KKKDKLTVDQVNGHVNEPADVNDDSNGVETPKQKNSEGDTEKSKKKKKKAISEAATNGHS
TPNTPVQTPTQTPSPSSEDSASDSDKEPEETPEQKEGAFSNFRIAQHTINKLKARGVSYL
FDIQVKTFNSVYDGEDVIAQARTGTGKTFSFAIPLVEKLQNDSAEMTRGRPPKVLVLTPT
RELAIQVSKDFKDVSKRLSIACFYGGSSYNPQIDAIRNGIDILIGTPGRIKDHLQNNKLN
LSKLKHVVLDEVDQMLDMGFAEQVEEILGTSYEKDSDTNPQTLLFSATCPSWVYEVAKKY
MRAECKHVDLIGKKTQKAATTVEHLAITSHWSQRAAVIGDVIQVYSGRHGRTIVFCETKK
EANELAMNASIKQSTQSLHGDIPQKQREVTLKGFRNGTFEVLVATNVASRGLDIPEVDLV
VQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRREEDQLRYVENKAGITFRRVGVPTAN
DIIKSSSKDAVRFLDSVPVTAISYFRASAEKLIEEKGAVDALAAALAHISGATSLEQRSL
LSSDAGYTTMQLVCSQELHNLGYAWKTIKEQLGEEIESHIHRMTFLKGKTGVCFDIPADK
VKEIQESWKDGRRWQLTAATELPELEEKQFSNRGDRGGGGFRGGRGRNFGGHGGRGNGFR
SGGGGGGGYGNNRGGQKRSFSQAFDY
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaaataatctttgaaagcgaggatccaatcatggaagaagacgcggacact
gtcgcggtggctaaaaccccaaatagcaagaccaaggagggcaagaagctcaagaaaaag
aagcagcaggtggaggaacaggagcaccccgactgtgaccctccaacaccaaagaagaaa
aagaaaaaagacaaactgaccgtggaccaagtgaacggccacgtaaatgagcctgctgac
gtcaatgacgacagtaatggtgtcgaaacgccaaagcagaagaactcagaaggagacaca
gagaaaagcaagaaaaagaaaaagaaggcaatatcggaggcagcaaccaacggacattcc
accccaaacaccccagttcagactcccacccagacaccgtcaccgtcaagtgaagactca
gccagtgacagcgacaaagaaccggaggagacaccagagcagaaagaaggggcattctcc
aacttcagaattgcccaacacactattaataaactaaaagctcggggagtctcttacctg
tttgacattcaggtaaagacgttcaattctgtttatgatggagaggatgtaattgcccaa
gcccgaacaggcacaggaaagactttctccttcgctatccccttggtggagaagctccaa
aacgattccgcagagatgaccagaggccgacctcccaaggtcctggtgttaactccaacc
agagagttagccatccaggtttctaaggacttcaaagatgtctccaagagactttctatt
gcctgtttctatggaggcagctcatacaatccacagattgatgctatccgaaatggtatt
gatattttgatcggaacacctggacgtatcaaagaccacctccagaacaataaactgaac
ctctccaaactgaaacacgtggttctggatgaagtagaccaaatgttggacatgggattt
gccgaacaggttgaagagattttgggtacatcatacgagaaagactctgacaccaaccca
cagactcttctgttttcggccacctgcccatcttgggtgtacgaagtggccaagaaatac
atgagagcagagtgcaaacatgttgatctgattggcaagaaaacacaaaaagctgcaaca
actgtggaacatctggccataacgtcccactggtcacagcgtgcggctgtgataggtgat
gtgatccaggtgtacagtggcagacatggcaggaccattgtcttctgtgagacaaagaaa
gaagctaatgaacttgccatgaatgcgtctatcaaacagagtacccagtcccttcatggc
gatattccacagaaacagagagaggtgacgctgaagggtttcaggaacggaacctttgag
gttctggttgccaccaatgttgcttcccgtggattagacatccctgaagtcgacttggtg
gtccagtgttcgccacccaaggatgtggagtcgtacatccaccgttcgggccgtacgggc
agagcaggcaggactggagtctgcatctgcttctaccagaggagagaagaggaccagctg
cgctacgtagagaacaaagctggcatcacatttaggcgagttggcgttcccactgccaat
gacatcatcaagtcatcaagcaaggatgctgtcaggtttctggactctgttccagtcact
gctattagttacttcagagcatcagcggaaaagctgatcgaggagaaaggagcagttgat
gcactagctgccgccctggcccatatttctggagccacaagtctggagcagaggtcactg
ctcagctctgatgctggttacaccaccatgcagttggtgtgttcccaggagttgcataat
ttgggttatgcctggaagaccatcaaagaacaactcggagaagagattgagagccatatt
cacagaatgaccttcctcaaaggcaaaacaggagtttgttttgatattccagctgataaa
gtcaaggagattcaggagagctggaaggatggtcgccgttggcaactcaccgctgccaca
gagctcccagaactggaagagaagcagttcagtaaccgcggtgacagaggaggaggaggg
ttcagaggtggaaggggacgaaatttcgggggacatggtggccgtggtaacgggttccgg
agtggtggtggtggcggcggcggctatggcaacaacagaggtggacaaaaacgcagcttc
agccaagcttttgattactga
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