Embiotoca jacksoni (black perch): 138213118
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Entry
138213118 CDS
T10523
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eja04040
]
138213118 (hcn4)
Ion channels [BR:
eja04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
138213118 (hcn4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
138213118
NCBI-ProteinID:
XP_069030092
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MDRLHSSMRKRLYSLPQHIGQKASIMGEGEDADKDTRRKSIRMKPLPSPSPTSGGSCKGI
GETKSGESVIMETDIGRPMKTSSNGDCRRFRGSLSSITSRHVHDSDSAEERRLITEGDVT
PSEESPPGAIGDGQPDQGAQGASGGGGAPNDSTDQQSGFIKLDGIDQILPDDERLYQAGF
IHRQLGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLM
VGNLIIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEIILDPQQI
KIKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSR
LIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPADCWVSK
NKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHA
TALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESILGEL
NEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLKFEVFQPGDYIIREGTIGKKMY
FIQHGVVSVLTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVL
EEYPMMRRAFETVALDRLDRIGKKNSILQHKVQHDLSSGVLNYQENEIIQQIVQHDRDMA
HCAHLMQNAPPQTPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPPTLFRPPLSV
LGSLKDPPSRLKKFHTLVPSSTAPDSARDSPSSTPSKLRTGVDMSLLASFRAQHMTSGSG
ATGSSQHASGSGGHRGHSGAGSGSSGGGASIFPFGQYSSSGSPSSSMAQLHPQPQHQQPF
RSSTPPLSNLFHQGSIGGSTGSGLSGGAVGACGGGATGWSSGGAVGGSVEGATGGDTAWA
GEDFTTGVTEVNPRGQFGFGVATGGSVGGISGETVGGVSEGSVGAACGRLAGGTSGGSVV
GITCGSIPDTTRRSMGGTSRGSIKRASGGSVGGASGESLVVTTTGGSLGRASDGSMSVIS
GGASGGTFGGISGDSTVGNPAGSLGRASGGSTTSHIGGGSSGPGGGVIGGNIGRPVGGAV
GSHMAGSTACPGGGVSGVIPAGFLSSSHSPISTGSSSPMPGQLVHNQPPPKAPQVAPLQQ
FAGGGRTTSGLNLFQSPTQGSPSLSRGQHSQQPPEGYSSSLSHFSLTGLQTGCFPQQMSL
ERSALASLAQYGSANASPCLTPVAPSPTIQSPVAGRTFHYSDPSSATGSHSSLLMPQSSL
PSQLPSQPHTTGRDSPLGRFSEDLKLLSSSHPSLPQEVSQALGHQTPRSSVETGYYPSPF
SSPTRVPKPCSSVPGHMTPPIQMSPGHPHQTHSPGTSPALPLRRGSAAYSSDLEPQTVRS
KLPSNL
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttgcactcctccatgcgtaaaaggctctacagcttgccacagcacattgga
cagaaagcatctataatgggcgaaggagaagatgcagacaaggacacccggaggaagagt
attaggatgaaacctctgccgtcaccgtcgccgacctctgggggaagctgcaaaggcatc
ggcgagaccaaaagtggggagtctgtgatcatggagacggacatagggagaccgatgaag
accagttcaaatggagattgccggagattccgcggcagcctttcgtccatcacaagtcgg
catgtgcacgactcggactcggcggaggagagacgcctcattaccgagggggatgtcacc
ccgagcgaggagagcccccctggagccatcggtgatgggcagccggatcaaggtgcgcag
ggggccagcggcggcggtggcgccccaaatgattcaacagaccagcagtcagggtttata
aagttggatggcattgatcaaattctgccggacgacgagagattatatcaggcggggttc
atacacagacagttgggagcaatgcttcaaccaggggtcaacaagttctccctgaggatg
tttggaagtgagaaggcggttgaacgggagcaagagcgggttaaatccgccggattttgg
ataattcacccctacagtgatttcaggttttactgggatttgaccatgctgctgctgatg
gttggcaacctcatcatcatccctgtgggcatcacattcttcaaggacgagcacacacca
ccctggatcgtgttcaacgtggtctccgacaccttcttcctcatggacctggtcctcaac
tttaggacgggtatcgtcaaggaggacaacacggagatcatcctggatccgcagcaaatc
aagatcaagtacttgcggagctggtttgttgtagacttcatatcctccatccctgtggac
tacatcttcctcatcgtggagacgcgcattgactcagatttctacaagacggcgcgcgcc
ttgcggattgtccgctttaccaagatcctcagcttgttgcgactcctgcgcctctcaaga
ctcattcgctacatccaccagtgggaagagatcttccacatgacctatgacctagccagt
gccatggtgcgtatagtcaacctgatcggcatgatgctgctgctgtgtcactgggatggt
tgcctgcagttcctggtgcccatgctgcaggacttccccgccgactgctgggtgtccaaa
aataagatggtgaatgacacgtggggacagcagtactcctacgcacttttcaaagctatg
agccacatgctgtgtattgggtatggcatgtaccccccggtgggcatgacagatgtgtgg
ctgaccatcctcagcatgattgtgggcgctacctgctacgccatgttcgtgggccacgcc
acagccctgatccagtctctggactcatctcgacggcagtaccaggagaagtacaaacag
gtggaacagtacatgtccttccacaagctgcctgcagatatgaggcagagaatccacgac
tactacgagcaccgttaccagggaaagatgttcgacgaggagagcatcctgggagagctg
aacgagcccctccgagaggaaatcatcaactttaactgtcgaaagttggtggcgtccatg
cctctatttgccaacgcggacccaaacttcgtgacctccatgctcaccaagttgaagttc
gaggtgttccagccgggggattacatcatccgggagggcaccattggcaagaaaatgtac
ttcatacaacacggggttgtcagcgtactaaccaaaggcaataaagagaccaagctttca
gacggctcctactttggggagatttgtttgctgacacgaggcagaaggacagccagtgtt
cgagccgacacatactgtcgtctgtactctctgtctgtcgacaacttcaatgaggtactg
gaggagtatcctatgatgagacgggcctttgagactgttgccctggacaggctggatcgt
attggcaagaaaaactccatcctgcagcacaaggtacaacacgacctcagctctggtgta
ctcaactaccaggagaatgaaatcatccagcagattgtgcagcacgacagggacatggcc
cactgcgcccaccttatgcagaacgccccacctcagacgcctccgtcacctacccctgtg
atctgggcccccctaatccaggccccactccaagcagcggccgccaccacctcagtagcc
attgccctgacacatcatccccaccttccaccaacgctcttcagacctccgttgtctgtt
ctgggttccctaaaggaccctcccagccgacttaagaagttccacacattggttccttca
tccacagcacctgactctgctcgggactctccttctagcacaccttcaaagctgcgcact
ggggtggatatgtcgttgctggcctcttttcgagcccagcacatgacatcaggttctggg
gcaactggctctagccaacatgcctcaggtagcggaggccaccgtggacatagtggggca
gggtctgggtccagtgggggaggggcctctatcttcccctttggtcaatactcatcctct
ggttcaccctcgtctagtatggcccagctacacccgcagccacagcatcaacaacccttt
cgttccagcaccccacctctttcaaacctcttccaccaaggatctataggtggaagcaca
ggttcaggactaagtggaggggcagttggagcctgtggtggtggtgctacagggtggtct
tcaggtggagcagttggaggttcggttgagggagccactggaggagacaccgcttgggct
ggggaggactttacaactggagtgaccgaagtaaatcccagaggacaatttgggtttgga
gtagctactggtggatcagttggagggatctcaggggaaacagtgggaggagtatcagaa
ggatcagtgggtgcagcttgtggcagattagcaggtgggacatcaggtggatcagtggta
ggcattacctgtggttcaataccagatacaaccaggagatcaatgggaggaacttctaga
ggatcaattaaaagagcttctgggggatcagtgggaggggcttctggagaatcactggtg
gtgacaactaccggaggatcattagggagggcttctgatggatctatgagtgtgatttct
ggtggggcctctgggggaacatttggaggaatttctggtgattcaacagtaggtaatcct
gcgggatcattgggaagggcctctggtggatcaacaactagccatataggaggaggttca
agcgggccagggggaggtgttattggaggaaatattggcagaccagtaggaggtgcagta
gggagccatatggcagggtctacagcttgccctggtgggggggtttccggtgtaattcca
gctggatttctgagttcctcccatagtcctatatccactggttcgtccagcccaatgcct
ggtcagcttgtccataaccagccacctcccaaggctcctcaggtggctcctctgcagcag
tttgctggaggaggtaggactaccagtggcttaaacctcttccagtcccccacgcaaggc
tccccatcacttagcagaggacaacacagtcaacagcctcctgaaggatactcatcttcc
ctgagccattttagcctgacaggcctccaaactggctgctttcctcaacagatgtcattg
gagaggtctgccttggcttccctggcccagtatggttcagcaaacgcctctccctgcctt
accccggtggcgcccagtcctactattcaaagcccagtggcaggcaggactttccactac
agcgacccttccagtgccacaggatcccactcgtctttgctcatgcctcagtcttctcta
ccctcacagcttcccagccagccacacacaacagggagagattctcctctgggacgtttt
tcggaggacctaaagctgttatccagctcgcacccatcgctgccccaggaggtgtcccag
gccttagggcaccaaactcctcggtcctctgtggaaactggatattacccatcaccattt
tcctcacctactcgtgtaccgaaaccctgtagctcagtgccagggcacatgactcctcca
atccagatgtctccagggcaccctcaccagactcactcccctgggacctccccggccttg
cctcttcggagaggctctgctgcctattcatcagatctagaacctcaaactgtccgctcc
aaactcccttccaatttgtga
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