Embiotoca jacksoni (black perch): 138213271
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Entry
138213271 CDS
T10523
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eja03036
]
138213271 (chd9)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138213271 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
138213271
NCBI-ProteinID:
XP_069030380
LinkDB
All DBs
Position
Unknown
AA seq
3051 aa
AA seq
DB search
MDFFDDPNLFVGGLEGLDEDGFPSAPSLVDELNLSADFEPLQVEPLGPGKHQDMMPPVST
QQAMPSYSQPMGHYIGMKPPNPMGQTFSGSRSTGGAMIAEQHGQYHNAAVSQVPQSNGLF
CNSGSPMWGNQDQNGNMYHPISQQQPLQHQQLCHQQQQLHNQQLHVRQQQTQQRQHHPCH
QQETQQLRMRQQQLQQQQSHQQQLLNQHQQINAQAVSLQQQQQHHNFSFHPGGQSNSQQQ
IPRAQQQVQHPLTVREPPFHSRALPSKSYLESQNASLNRTCLQTPQQQGSYQLIRGGQAF
SGSGLEDSNLSFPMHSSPMVHSLPTCSVSSANAYQPAQYPAYPGEPEIPSLSQQSLSSAS
VSRPTTTTTAPLTSTVPELSGTACQFSSTPLMSQQHTRTPVSQAEECPFRALRCSGEAQE
SCKSSEMFGESMSCYPSIASHLPSEQPQSCGVINTNGYEALGDSLLPTEAQDGDLEGLEP
PDLLPDLLPQLEDAFRQQDESSCSWADSSQEKGPEDRKPTSTEYKEDKPRKNANGPGSQV
RVLSPPMKSSSSSSSSSSSSSSSSSSSSEKRVRRTHQQMESTLQDKQEKANRIISEAIAK
ARQRGEKNIPRVMSPESFPSSSSQYKAHRDREHKGNGKARSKEKACRKACIVASSKPKQK
AKIGKIVIKIGKKKKRKPESSEEESDDAPPPRHTSKNDDSKRRSNRQVKRKKYAEELEAR
LSDEEVKVIMKAKKTNAASSKTPALQLFVENPSEEDAAVVDKIMSSRVVKKEVSAGVVVE
GEEFFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKTKQAQRALFFADMEEDPFNPDY
VEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKP
DSRRTERPPANLWKKRDQSREYRNGNGLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKT
IQSITFLEEIQRVGIKGPFLIIAPLSTIANWEREFHTWTHLNVIVYHGSMVSRQMLQQYE
IYFRDAQGRVIRGAYRFQAVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEG
FKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQG
ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPN
LVNTMMELRKCCNHPYLIKGAEEKILEDFREVHSPTAIDFHLQAMVQSAGKLVLIDKLLP
KMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRF
VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSY
EREMFDRASLKLGLDKAVLQSMSGRDNSLGGSTGGGAVQQQLSKKEIEDLLRRGAYGAIM
DEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDK
WAKKADIDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESDSDDTKPKLRRNH
DRPNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRSLLAYCLVHYR
GDDKIKSFMWDLIAPTEAGRTKELQNHLGLSAPVPRGRKGKKVKIQSSSFDIHKAEWLRK
HNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGIQAEKVLDGVDSSEVKIWVPD
PDQSELPALWWDAISDKCLLLGVYKHGYEKYNTIRADPNLCFLERAGRPDEKAIAAEQRG
NDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDNAGDAAPVTEGESAYWPSPSVL
TARLRRLITASQRYTKSRQILHIHQSQSQSQSQSQSQSQSQSQSQSQSQSQSQQTMILSA
PLCPLPATLNDTLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPNLGRFDWTKFRA
MARLHKKTDESLQKYLCAFTAMCRRVCRLPPKEGDSAVDPSLTIQPITEERASRTLYRVE
LLRQVREQVLRHQFLYERLPLCQMSSDLPVWWEAGAHDRDLLIGAAKHGVSRTDYHILRD
PELSFMAAQRNYSQTKASQQQSRTSTPLLHPQLQAAGSVPTGSPPPPPTQRDADPCGLVP
KVEPASEGEEGKERRGESWSPSRAPATPTGLEEKPVSVVKENERQMVAARTKPLTPNSSE
RKPKKASKRGRREARHGSVSDSDGSSSSSSSRSSSSSSSSSASSSHSGSSSSSSSSSCSS
GSSSSSSSSSSSSDDSESEGEERKKKVPAATTVKGFDEDSVASLITTQDETQDTHVAENG
ITNNNNSSSQPFQGGGYMLAASYWPKDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVT
SFYTTKLLDNANSLCEDPSASPQGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLK
RPLETEEGPQAQQQYLARLHELQSASDTGLADITKPQCSFQTVPSGLTGQMRLNGAVDGQ
PVVKRRRGRRKNVEGMDLLFMNRSRVPAVPDQVPPGWGGIGQVGMAAAVPGFSQGSGQVP
ADTESRVPVINLKDGTRLAGDDAPRRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQ
DGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEY
GVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVSRRGRRPKNPLAKAAAATAAPNPAAS
ALGLNPLLANGLLSGMDLTSLQAFQQNLQSLQSLQLTAGLMGLPSDAGNLAASNLAAMFP
MMLSGMAGLPNLLGMSSLLGKPAQEGAGGSDEKTKGAAAAAAGVGAGEPSASKAPPHTSD
TKGERTEGSNTTPSSTSSSASSATATQSASAASAASGHPLSLNPLLLSSMLYPGMLLTPG
LNLPVSAAQPQSSNTDPALPPAAPPPPPPPPAASRSSPQRTEQPQAEKDGEEEEEEDEDE
DQALDDEEEEEESAEQKENSGPDGSGKAESSSSESGSSSSSSDDSDSSDED
NT seq
9156 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttgatgaccccaacctctttgttggaggtttggaagggctggatgaggat
ggcttcccttcagcaccatcacttgtggatgagctaaacctcagcgctgactttgaaccc
ctccaagtggagccacttggcccagggaagcatcaagacatgatgccacccgtttctacc
caacaagccatgcccagttacagtcaacccatgggccattacattggcatgaagccaccg
aatcctatggggcagacattttctggctctcggagcaccggtggggccatgattgctgag
caacatggccagtaccacaatgccgccgtgagtcaggtacctcaatccaacgggctgttc
tgtaacagcggcagtccaatgtggggaaaccaagaccagaatgggaatatgtaccacccc
atatctcagcagcagccacttcagcatcagcagctttgtcatcagcagcagcaactgcac
aaccagcaacttcatgtcagacaacaacaaacacagcagcgacagcaccacccctgtcat
caacaagagacgcagcagctcagaatgcgacagcagcagctgcaacaacaacaaagtcat
cagcaacagctgttaaaccagcaccaacaaattaacgcgcaggctgtgtccctgcagcag
cagcagcagcatcacaatttctcttttcacccgggaggtcaatccaacagccaacaacaa
attccccgtgcccagcagcaggttcagcacccactaactgtaagagagccaccgttccat
tcaagggctcttccaagtaagtcttatttggaaagtcaaaatgcttctctgaataggact
tgcttacaaacaccacagcagcagggtagctaccagttgatcaggggaggtcaagccttc
tctgggtccggactggaagactctaacctgtccttccccatgcattcatcgcctatggtt
cactccttgcccacgtgctctgtcagttctgccaatgcttaccaaccggctcagtaccct
gcctaccctggagagccagaaatacccagtctcagtcagcaatctttgtcctcagcctca
gtgtcgaggcccaccaccaccaccacagcaccactcacttctacagtgcctgagctatca
gggacagcatgccagttttcatccacaccacttatgagtcagcagcacactaggacccca
gttagccaggcagaggaatgtcctttccgcgccctacgttgttctggagaagcgcaggaa
agctgcaagtcatccgagatgtttggtgaatctatgagctgctacccaagcatcgccagc
catctgccctctgagcagcctcagagctgcggggttatcaacactaatggatacgaagct
ctgggagacagtctcctgccgacagaggctcaagatggcgacttggagggactggaacct
cctgacctcctgcctgacctactaccccagctggaggatgctttcaggcaacaggacgaa
tccagctgctcttgggccgattccagtcaggagaagggacctgaggacaggaaaccaaca
tctactgaatacaaggaagacaagcctcgaaagaacgctaatggtcccgggagccaggtg
cgggttctcagtcccccaatgaagagcagctcatcgtcctcctcctcttcctcttcgtca
tcatcctcatccagctcctcatcggagaagagggtgcggaggacacatcaacagatggag
tcaactctgcaggacaagcaggaaaaggccaataggataatatcagaggcgattgcaaag
gcccggcagcggggagagaagaacatcccacgggttatgagcccggagagcttccccagc
tcttcatcgcagtacaaggctcaccgtgaccgcgagcacaaaggaaacggcaaggcacgg
tctaaagagaaggcctgcaggaaggcctgcattgtagcctcctccaagcccaagcagaag
gccaagatcgggaaaattgtcatcaagattggaaagaagaaaaagcgaaagccagagtcc
tcagaggaggagtcagatgatgctcctccccctcgacacacctcgaagaatgacgattct
aagaggcggtctaatcgccaggtgaagaggaagaaatatgctgaagagctcgaggccagg
ttgtcagatgaggaagtcaaggttatcatgaaagccaagaaaaccaacgctgcatcgtcc
aaaacacccgctcttcaactgtttgtagaaaatcccagtgaagaggacgctgctgtcgtc
gacaaaatcatgtcttctcgggtcgttaagaaggaggtctctgctggagtggtggttgaa
ggggaggagttttttgtcaaatacaaaaactactcttacctacactgtgagtgggccacg
gagcagcagctggagaaggacaagaggattcagcagaagatcaaacgcttcaagacgaaa
caagcacagagggcgctgttcttcgcagatatggaggaggacccgtttaaccctgactat
gtagaggtagacagagtgctggaggtgtcgtattgtgaggacaaagacacaggagaggaa
gtggtgtactacctggtgaagtggtgctctctgccttacgaggacagcacctgggagctg
aaggacgatgtagatcagagcaagattgaagagtttgagcagctgcaggcagtcaagcca
gactcgcgcaggacggagcgacctccagccaatctgtggaagaagagggatcagtcgagg
gaatacaggaacggcaacggcctcagggactaccagctcgagggggtcaactggctcctc
ttcaactggtacaacagacggaactgcatcctggcagacgagatgggcctgggaaagacc
atccagtccatcacgttcctggaagagatccagcgcgtgggcatcaaggggcccttcctc
atcatcgccccgctctccaccatcgccaactgggagcgcgagttccatacttggacccac
ctcaacgtcatcgtctaccatggaagcatggtcagcaggcagatgctccagcagtacgag
atctatttcagggatgcgcagggtcgtgtgatacgaggcgcctacaggttccaggccgtt
atcaccacatttgagatgatcctgggaggctgtcccgaactcaacgccatagattggcgc
tgcgtgatcatcgatgaggcccatcgtctcaagaacaagaactgcaagctgctagagggg
ttcaagctcatgagcctggagcacaaggtcctgctgacagggactcctctccagaacaca
gtggaggagctcttcagcctgctccacttcctggagccggcccgcttcccctccgaaaac
accttcatgcaggagtttggagacctcaagactgaggagcaggttcagaagctccaggga
atcctgaagcccatgatgctgcgtcgtttgaaggaggatgtggagaagaagcttgctcct
aaagaggaaaccatcatcgaggtggagctcaccaacattcagaagaaatactaccgcgct
atcctagagaagaatttctccttcctggctaaaggagccggccaggcaaatatgcccaac
ctggtgaacaccatgatggagctgagaaagtgttgcaaccacccctacctcatcaaaggg
gcagaagagaaaatcctcgaggacttccgggaagtgcacagccccactgccattgacttt
cacctgcaagcgatggtacaatctgcagggaagctggtacttattgacaaattgctgcct
aagatgaaggcaggagggcacaaagtgctcatcttctcccaaatggtgcgctgcctggac
atcttggaagactacctcattcagagaaggtacttgtatgagcggattgatgggcgtgtt
cgtgggaacctgcgacaggctgccattgaccgcttcagcaagcccgactccgaccgcttc
gttttccttctgtgtacgagagctggcggcctggggatcaacctcaccgcagcagacacc
tgcatcatctttgactctgactggaacccgcagaacgacctgcaggcccaggctcgctgc
catcggatcggtcagaacaaggcggtaaaggtgtaccggctgatcaccaggaactcgtac
gagcgagaaatgttcgaccgcgccagcctcaagctgggcctggacaaagcggtgttgcag
agcatgagtggccgagataacagcctgggaggaagcaccgggggaggggctgtacagcag
cagctgtctaagaaggagattgaggatctgttgcgacgtggtgcttatggggccatcatg
gatgaagaggatgaaggggccaaattctgtgaagaggacattgaccagatcctccagcgc
aggacgaagaccatcaccattgagtctgagggacgaggatccacatttgcaaaggccagt
tttgtagcatctggaaaccgcacagacatttctctggatgaccccaacttctgggacaag
tgggccaaaaaggcagacatcgatatggaaatggtcaacggcagaaacagcttggtgatc
gacactcctcgtgtcaggaagcaaacgaggcccttcagtgccaccaaggatgagttagca
gagctttcagagggtgagagtgacagcgacgacaccaaaccgaagctcaggcgaaaccac
gaccgccccaacagctacggccgcacagagtgcttcagagtagagaagaacctgctcgtc
tatggatggggtcgttggaaggatatcctcaaccacggccggtttaagaagcagctgact
gagtgggacgtggagtccatctgccggtccctgctggcctactgcctggtccattaccgt
ggagatgacaaaatcaagagcttcatgtgggacctcatcgctccgactgaagccggacgc
acaaaggagctgcagaatcacctgggcctgtcagccccagtgcctcggggcaggaagggt
aagaaggtgaagatccagtcgagctcttttgacatccacaaagccgagtggctcaggaaa
cacaacccggagcacatgcttcaggacgatggctacaagaagcacctgaagcaccactgc
aacaaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtgataggaatc
caggcggagaaggtgctagacggcgtggactccagtgaggtaaagatctgggtgccggac
cctgaccagtcagagctgcctgccctgtggtgggacgccatctcagacaagtgtctgctg
ctgggtgtctacaagcatggttatgagaagtacaacactattcgtgcggaccctaacctg
tgctttctagagcgagcggggcgaccggatgagaaggccatcgctgccgaacagagaggc
aacgatttcatggatggggatgtggatgatccagaatataagcctgctccagctctgcta
aaggacgatatggaggatgacgcctcttctcctggagacttggttgtcactgacaacgct
ggagatgcagctccagtgacagaaggtgaatctgcctactggccctccccctcagtgttg
acagccagactgaggcgtctaatcacagcctctcagcgctacaccaagagtcggcagatc
ctgcacatccaccagtcccagtcccaatctcagtcccagtcccaatctcagtcccagtcc
caatcccaatctcagtcccagtcccagtctcagtcccagcagaccatgatactgtctgct
ccgctctgcccgctgcccgccacactcaacgacaccctcaaccccaagatggctgctaaa
attgaacgtcaacaaagatggaccaggcgggaagaggctgacttctaccgcgtcgtctcc
accttcggtgtcgtgttcgacccgaacctcggccggttcgactggaccaagttcagagcc
atggctcggctgcacaagaagactgacgagagcctgcagaaatacctgtgcgctttcact
gccatgtgccgacgggtgtgtcggctgccgcccaaagagggagactcggcggtggacccg
tctctgaccatccagcccatcacagaggagcgagcgtcgcgcacactgtacagggtggag
ttgctccgccaggtgagggaacaggtccttcgacatcagtttctctacgagcgcctgccg
ctgtgtcagatgagctctgacttacccgtgtggtgggaggccggcgctcacgaccgcgac
ctgctaatcggtgccgcgaagcacggcgtcagccgcaccgattaccacatcctgagggac
ccggagctcagcttcatggctgcccaacgcaactacagccaaacaaaagcctctcagcag
caatcgcgtacatccacccctctgctacaccctcagctccaggctgccggctcagtgccg
acaggctctccgccgcccccgcccacccagagagacgctgatccctgtgggctcgtgccc
aaagtggaaccagcctcagagggggaggagggcaaggaaaggcggggagagagttggagc
ccctctcgagcaccagctactcccacaggtctggaggagaagccggtttcagtggtgaag
gagaatgagaggcagatggtggcggcgcgaaccaaacccctcacacccaactcgtcagag
aggaaacccaagaaggccagcaagaggggccgcagggaggccaggcacggctccgtgtcc
gactccgacggctcctcctcaagctcttcgtcacgctcctcttcctcctcctcatcttcc
tccgcttcctcatcacattccggatcaagctcctcgtcctcgtcatcatcttgctcctct
ggctcttcgtcatcctcctcctcctcctcgtcttcctccgatgacagtgaaagtgaagga
gaggaaaggaagaagaaagtgcctgcagcaacaactgtgaagggctttgacgaggacagc
gtggcgtctctgatcacgacacaggatgaaacgcaagacacccacgtggctgagaacggc
atcaccaacaacaacaactcctcctctcaacctttccagggaggagggtacatgctcgcg
gcatcctactggccaaaggatcgagtgatcatcaaccgcctggacagcatctgccaagca
gtgctgaagggcaagtggccgggaacacgtcgggtctacgagcctggaggcgccgtgacc
tccttctacaccaccaagctgctggacaacgccaacagcctatgcgaggacccctctgcc
tcgccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaa
ctcaacgatcaggaaggaggtctgaagttgaccttccagaagcagggtctacctctgaag
aggcccctggagacggaggaaggcccccaggcgcagcagcagtacctggcccggctccac
gagctgcagagtgcctcggacacgggcctcgccgacatcaccaagcctcagtgcagcttc
cagactgttccttcaggtctcaccggtcagatgaggttgaacggagcagtggacggccag
ccggtggtgaagaggcgaagagggaggaggaagaacgtggaggggatggacctgctcttc
atgaacaggagtcgagtccctgctgttcccgatcaggtgcctcccgggtgggggggtatc
ggccaggtgggcatggctgcggccgtgccgggcttcagccagggctccggccaggtccct
gcggacaccgagagcagggtccccgttatcaacctcaaagacggcacgcggctcgccggg
gacgacgccccccggaggaaagacctggaacagtggctgaaagagcacccgggcttcgtg
gcagacacgggagccttcatccccggggtaaataagatgcaaatgcagttccacttccag
gacggtcggccgaagcagaagaggcatcgctgcaggaaccccaacaagatcgacgtcaac
agtctgacgggagaggaacgagttcagatcatcaacaggagaaacgcacgcaaggtcggc
ggagctttcgctcctcctctcaaagatctgtgccgcttccttcaggagaaccccgagtac
ggagtcccgcccgaatgggccgacgtggtgaaacagtcgggttacctcccagagagcatg
tttgacaggatcctgacgggacccatcgttcccgaggaagtgagccggcgcggacgtcga
cccaagaaccctctggccaaggcggcggcggcgacggcggcaccgaacccggcggcctcg
gctctgggcctgaaccccctgctggccaacggcctcctctccgggatggacctcaccagt
ctgcaggccttccagcaaaacctgcagagtttacagtccctgcagctcaccgcgggcctg
atggggctgccgtccgacgccggcaacctggccgcgagtaacttggccgccatgtttccc
atgatgctgtccggtatggccggattgccgaacctgctcggcatgagcagcttgctcggg
aagcccgctcaggaaggcgccggcggctccgacgagaagacgaagggagccgccgccgcc
gccgccggcgtcggagcgggagagccgtctgcctctaaagcccccccccacacctcagac
accaaaggagaaaggacagagggctcgaacacgactccttcctccacttccagctccgct
tcctctgccaccgccacacaaagtgcttcagctgcctccgcagcctccggtcacccactg
tctcttaaccccttgttactctccagtatgctttacccagggatgcttctcactccaggc
cttaaccttcctgtgtctgccgcacagccgcagagctcaaacactgaccccgccctcccg
cccgccgctccgcctcctccgcctcctccgcccgcagcctcccggtcatcgccgcagcgg
acggagcagccacaggcggagaaggacggcgaggaggaggaggaggaggacgaggacgag
gaccaggcgttggatgacgaagaggaggaggaggaatccgcagaacaaaaggagaacagt
ggtcctgacggttcagggaaagccgagtcatcttcatcagagtctgggagctcttcctca
tcctcagacgattcagactccagtgacgaggactga
DBGET
integrated database retrieval system
