Embiotoca jacksoni (black perch): 138213460
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Entry
138213460 CDS
T10523
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03015
mRNA surveillance pathway
eja03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138213460
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138213460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138213460
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
138213460
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
138213460
NCBI-ProteinID:
XP_069030698
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MASAGPAAGPSSSAEDLLDMYSDLNQNDEDLDRIAEANELFDAVLTGSVNQDKNIAAAAV
APVKKLPAEEEAKSTEVKTPKEGNSMRRLSLYVGNFPWWTSDKDLTCMAQKLGVKDIAEI
KFAENRVNGQSRGYAEVVVTSEGSLKILLEKIPLCELHGERLDCRFATRQNLTVFEDTAN
KRIPLRVNSKDSKESESSDKIPSLLSQEPSPPPIPPLFPSHPLANRFPSLPSPFLGQAPP
PFPYMTPPMAPLMQPHMFPSHPVHVSSQPSPSLHINPAFFPPVQDGHSSKAYSQQKHTPQ
TTDGDFEELMNRNRAIASSAITKAVSGATAGDMRVAMETLLTAIAVIKQSRVFGDERCQA
LVTSLKDTLVSIQGNYGSSRSSSRSRDKERDRDRGRDRDRHRERQRDREDSSGWESAGMS
RRHRERSWSGERDKERSRERDRYRDHRDRYR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcaggacctgcagccggaccgagcagctctgcggaggatctcctcgatatg
tacagtgacctcaatcaaaacgatgaggatttggacagaattgctgaagcaaatgaactt
tttgatgcggttctaactggttctgttaatcaagacaagaacatcgctgctgctgctgtg
gcccccgtgaagaagttgccagctgaagaagaggctaaatcaacagaagtgaaaacccca
aaagaaggaaactcaatgaggagactgtctttatatgttggaaatttcccctggtggaca
tctgacaaggacctgacatgcatggctcaaaagttgggtgtgaaggacatcgcagagatc
aaatttgctgagaacagagttaacggccagtcaagaggctacgcagaagtggtggtaacc
tcagaagggtccctcaaaatattgttggaaaaaatccccctgtgtgaactccatggggaa
aggctagactgtcgctttgccactcgccagaacctcactgtgtttgaggacacagcaaat
aaacgtataccactgcgtgttaattccaaagattccaaggagtctgaatcttcagataag
attccctcattattatcacaggagcccagccctccccccataccgccactgtttccatcg
catccacttgcaaacaggtttccttcattacccagcccttttcttggccaggcgcctccg
ccgttcccatatatgacaccaccaatggctccgctcatgcagccccacatgttcccttct
catcccgtccacgtgtcgagccaaccgtctcccagtctgcatataaatccggctttcttc
ccaccggtgcaagacggccacagcagcaaagcttacagccaacaaaaacacactcctcaa
actacagacggggactttgaggagctaatgaacagaaatagagcgattgccagcagtgcc
atcaccaaggctgtgtctggagcaacagctggagacatgagggtagccatggaaacactg
ttaactgccattgccgtcattaagcagtccagagtgttcggagatgaacgctgccaagcc
ctggtcacctcacttaaagacactctggtctccatccagggcaactatggttccagcagg
agtagcagtcgttctagggacaaagaaagagaccgggacaggggtcgagacagagaccga
catcgcgaaagacaacgtgacagagaggattcttctggctgggaaagcgcgggaatgtct
cgaagacaccgagagcgttcctggagtggagagagggacaaggagcgctcacgggaacgg
gacagatacagagatcacagagaccgataccgctaa
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