Embiotoca jacksoni (black perch): 138213497
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Entry
138213497 CDS
T10523
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138213497 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eja04131
]
138213497 (vps8)
Membrane trafficking [BR:
eja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138213497 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
TPR_VPS8_2
Clathrin
zf-RING_Vps41
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf_RING_Vps8_fungal
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
zf-C3H2C3
Xpo1
WDR55
EIF3I
zf-rbx1
PHD_4
Motif
Other DBs
NCBI-GeneID:
138213497
NCBI-ProteinID:
XP_069030752
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MSQSPDARSLMSASSQLNLVEVDSIDDKEFDIPQVDTPPTLESILSELEDEDEPFVLEDT
CVVNTDNMDAHSCDTSSLASSDSGDPAYLKRKRRTVDLNATVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVSGVIVVGTSHGLALVFETNQALRLCLGTKTTGAEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAVLHVKFTDDPTLAVCNDSGGSV
FELAFRRVMGMRSCDSRCLFSGSKGEVCCVEPLRAPPDFRDHPITHYSLLAMASLTKILV
IGLKPTLKVWMTFPYSKSDPSSVPQLSWQFVPVQKAVNPILAFCKGDTVHFLLVKKEETG
TIHVIKQRQLHLSCDIISLSWINSRTLVLVDSHEKLQVVDRPSQDVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIIYLGTKSAHIMALRNWRERIDCFL
KQEHFVEALSLAWSFHEGTAKAVVGLYGDPLKRKAVVSDKMVEILFQFAEFALKKCPEQG
KIQVMEQHFQDVVPVLVDYSLLLQRADLLFNQLYSRLMENMVAKGVFLESLESYIIADRL
GHMTTPIMRDLLAHYHGNGLLDSLERCIVHLDVTSLDIHQVVQVCWENQLYDAMIYVFNS
GMNDYITPMEKLFAVIGPTLREGRSLTDEDVVMGNKLLVYISCCLAGRAYPRGNIPEDLV
VQVKHQVFEFLIRLHSADSSEEEEVFPFIHTLLHFDTREFLNVLAMTFEDFKNDKQALEY
QQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDD
DSRHTERQQVLLELLQVGGVVQFNEGRLLTLAEKAKFYQICEFLYEKKHLYDRIIDCYLK
DPLRKLEIFCYIDSLLSMPGYSSEEKQTVKNKVLQNIQELVTLDPSKSADLVVFHFTEEV
QQIISELQDDQLLFRFLSCLLEPRESYSDSILPLERDLHELLLDLLCRFSPHQLLSFLHT
SQHYRLEEAIQVTEKYRCNEARAFLLEKKGDVQGAFVVLLETLKDKLCLLTAESDGGQDG
GHDGGQDGGQDGGQDGGQDGGHDGGQDGGQDGGHDGGQDGGQDEEESTLTRVKDSLNDIL
AFCHRSCQNLSQEQRESLWFPLLDTMMASQKQVKGLKAKRISEVLKELTMKVLNCMSSFI
SLPAIIQQILQDPVYGKGKLAEIQGLILGMLDTFNYEQTLLETTTSLLNHDLHWSLAHLR
AAVTRGVHPRQDYCNICLQHYKRRQDSAEEIIVFSCGHLYHLQCLQQKDCGWGAASEVQQ
WWRCYKCSFSHGGMGGASTKPTRGRCTSLAQTHVTTVHHDTGAAAHRKKVFVETTLDLQQ
EQSWDQIRCLYRGPSRLSILSELSHCHSNEKTGFLIPAQPGTESFQLKLSPPPLLEE
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtctccggacgcccgcagcctgatgtccgcctcgtcgcagctcaacctggtg
gaagtggactcgatcgatgataaagagtttgatattcctcaagtggatacaccgcccaca
ctggagagcatcctgagtgagttggaggatgaagacgaaccgtttgtgctggaggacacc
tgcgtggtcaacacagacaacatggatgctcactcctgtgacacctcgtctctggccagc
tcagacagtggagacccagcatacctgaaacgaaagaggaggacagtagatctgaatgca
acagttcacgggtctgtccttcgacacagcctgctgaagggcatctctgcacagatcgtc
tctgctgctgacaaagtggatgctggactgccaactgctatcacggtgtcgggggtgatc
gtggtgggaacgtctcacggtctggctctggtctttgagaccaaccaggctctgcgactc
tgtctgggcacgaagaccaccggagcggagttcggagccgtctctgccctgagcatcaac
catgactgctcgcgacttctctgcgggttcgccaaaggacagattacaatgtgggatcta
gccaatgggaagcttctgagaacgatcactgatgctcatcctccagggacagctgtactg
catgtgaagttcacagatgacccgactcttgcagtttgcaatgacagtggaggatccgtt
tttgaactggctttcaggagggtgatgggaatgcggtcatgtgactctcggtgtctcttc
agtggttctaaaggggaggtctgctgtgtcgaacctctgcgtgctcctccggacttcaga
gaccatcccatcacacactactctctgctggctatggcctctctcactaaaattctagtc
atcggactaaagcccactctgaaagtctggatgaccttcccttacagcaagtccgatccg
tccagtgtccctcagctgtcctggcagtttgttcctgttcagaaggcggtcaatcccatc
ctggctttttgcaaaggagatacagttcacttcctcctggtgaagaaggaggagacgggg
accatccatgtcatcaaacaaagacagctccacctcagctgtgacatcatcagcctcagt
tggatcaacagtcggactctggtcctggtggacagccatgagaagctgcaggttgtggac
cggcccagtcaggatgttctggagactctggacctggagcaggtgcagctggtctacaac
agccgacatttcaaatcgctggccaccggagggaatgtgtcccaggctttggctttagtc
ggagagaaagcctgctaccagtccgtctccagctacgcaggacagattatctatctgggc
accaagtcggctcacatcatggctctaaggaactggagagagcgtatcgactgcttcctg
aagcaggagcactttgtggaggctctctctctggcctggtccttccacgagggaactgct
aaggcggtggttggcctgtatggagatccgctgaagaggaaggccgtggtcagtgacaag
atggtcgagatcctcttccagttcgcagagtttgctctgaagaaatgtccagaacaaggc
aagatccaagtgatggagcagcacttccaggatgtggttccagtgctggtggactacagc
ctgctgctccagagggctgacctgctgttcaaccagctgtattcccggctgatggagaac
atggttgctaagggagtcttcctggagtcgttggagtcgtacatcattgctgaccgcctc
ggtcacatgaccactcccatcatgagggacctcctggcccattaccatggcaacggtctg
ttggacagcctggaaagatgtattgtccatctggatgtcaccagcctggacatccatcag
gtggttcaggtgtgttgggagaaccagctctatgatgcgatgatctacgtgttcaacagt
ggcatgaatgactacattactccgatggagaaactctttgcagtgattggcccaacactt
agggaggggaggagcctaacagatgaggacgtggtgatgggaaacaaacttctggtgtac
atcagctgctgtcttgcaggaagggcatatccccgaggaaacatccctgaagacctggtg
gtccaagtgaagcatcaggtgtttgagttcctgatccgtctccactcagctgattcttcg
gaggaggaggaagttttcccgtttattcacaccctccttcactttgacacgcgggagttt
ctgaacgtcctcgccatgacgtttgaagactttaagaacgacaagcaggcgctcgagtat
cagcagaggatagtggacatcttactgcaggtgatggtggacaacccagactttactccc
tcccaggtgggcgggctcttcacctttttggctcgccagttggccaagcccgacaacacc
ctttttgtaaacaggaagctgtttgatcaggttctggagtttctgtgttgcccagatgat
gattcccgacacactgagaggcagcaggttctgctggagctgctgcaggtcgggggtgtg
gtccagttcaatgaaggaaggctgctgactttggcagagaaggcaaagttctaccaaatc
tgtgaatttctttatgagaagaaacatctgtatgacaggatcatcgactgctacctgaaa
gaccccctcaggaagttggagattttctgctacatcgacagcctgctgtccatgccgggt
tacagctctgaggagaagcaaacagtgaagaacaaagtcctgcaaaatatacaggagctg
gtgacccttgaccccagcaaatcagctgatctagtggtgtttcatttcacagaggaggtg
cagcaaattatctctgagcttcaggatgaccagctcctcttcagattcctcagctgcctc
ttggagccacgagaaagttactcagactccatcctgcctctggaacgggacctccacgag
cttcttctggacttgctgtgccgtttttccccccatcagctcctcagcttcctccacacc
tcccagcactacagactggaggaggccatacaagtgacggagaagtaccgctgtaacgag
gccagagccttcctgctggagaagaagggagacgttcaaggagcgttcgttgttctgtta
gagacgctgaaggacaaactctgtctcctcactgctgagagcgatggaggacaggatgga
ggacatgatggaggacaggatggaggacaggatggaggacaggatggaggacaggatgga
ggacatgatggaggacaggatggaggacaggatggaggacatgatggaggacaggatgga
ggacaggatgaggaggagtcaacactaaccagagtcaaggattcactgaatgacatcctc
gctttctgtcatcgaagctgtcagaacctttcccaggaacaaagagagagtctgtggttt
cctcttctggacacaatgatggcttctcagaaacaagtgaagggactcaaagccaaacgg
atctctgaagtgctgaaggagctgacgatgaaggttctcaactgtatgagcagcttcatt
tctctgccggccatcattcaacaaatactgcaggacccagtttatgggaaaggaaaactg
gcggagattcaaggcctcattctggggatgttggacacttttaactacgaacagactttg
cttgaaacaaccaccagtctgttgaaccatgacctccactggtccctggctcacctgcgc
gctgctgtcacacggggagtccacccccgtcaggactactgtaacatctgtctgcagcac
tacaagaggaggcaggactcagcagaggaaatcatcgtgttcagctgtggccacctgtac
catctgcagtgtctgcagcagaaggactgtgggtggggcgctgcttcagaggtacagcag
tggtggagatgctacaagtgttccttcagtcatggaggaatgggcggggcttccaccaaa
ccaacaagaggccgctgcacgtctctggcacagactcatgttactacagtgcatcatgac
acgggagcagccgctcacaggaagaaggtgtttgttgagacgacgctggaccttcagcag
gaacagtcctgggatcagatacgctgtctgtaccgaggaccatccaggttgtccatcctt
tcagaactctcccactgccatagcaatgagaagacgggctttctaatcccagcccaacca
ggaacagagagtttccaactcaagctctctcctccacctctgttggaagaataa
DBGET
integrated database retrieval system
