KEGG   Embiotoca jacksoni (black perch): 138213497
Entry
138213497         CDS       T10523                                 
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
eja  Embiotoca jacksoni (black perch)
Pathway
eja04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:eja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    138213497 (vps8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eja04131]
    138213497 (vps8)
Membrane trafficking [BR:eja04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    138213497 (vps8)
SSDB
Motif
Pfam: Beta-prop_VPS8 TPR_Vps8 zf_RING_Vps8 VPS8_N TPR_Vps41 TPR_VPS8_2 WD40_CDC20-Fz Clathrin zf-RING_Vps41 zf-RING_UBOX zf-RING_5 zf-RING_11 zf_RING_Vps8_fungal zf-RING_2 zf-C3H2C3 Xpo1 WDR55 zf-rbx1 EIF3I PHD_4
Other DBs
NCBI-GeneID: 138213497
NCBI-ProteinID: XP_069030752
LinkDB
Position
Unknown
AA seq 1437 aa
MSQSPDARSLMSASSQLNLVEVDSIDDKEFDIPQVDTPPTLESILSELEDEDEPFVLEDT
CVVNTDNMDAHSCDTSSLASSDSGDPAYLKRKRRTVDLNATVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVSGVIVVGTSHGLALVFETNQALRLCLGTKTTGAEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAVLHVKFTDDPTLAVCNDSGGSV
FELAFRRVMGMRSCDSRCLFSGSKGEVCCVEPLRAPPDFRDHPITHYSLLAMASLTKILV
IGLKPTLKVWMTFPYSKSDPSSVPQLSWQFVPVQKAVNPILAFCKGDTVHFLLVKKEETG
TIHVIKQRQLHLSCDIISLSWINSRTLVLVDSHEKLQVVDRPSQDVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIIYLGTKSAHIMALRNWRERIDCFL
KQEHFVEALSLAWSFHEGTAKAVVGLYGDPLKRKAVVSDKMVEILFQFAEFALKKCPEQG
KIQVMEQHFQDVVPVLVDYSLLLQRADLLFNQLYSRLMENMVAKGVFLESLESYIIADRL
GHMTTPIMRDLLAHYHGNGLLDSLERCIVHLDVTSLDIHQVVQVCWENQLYDAMIYVFNS
GMNDYITPMEKLFAVIGPTLREGRSLTDEDVVMGNKLLVYISCCLAGRAYPRGNIPEDLV
VQVKHQVFEFLIRLHSADSSEEEEVFPFIHTLLHFDTREFLNVLAMTFEDFKNDKQALEY
QQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDD
DSRHTERQQVLLELLQVGGVVQFNEGRLLTLAEKAKFYQICEFLYEKKHLYDRIIDCYLK
DPLRKLEIFCYIDSLLSMPGYSSEEKQTVKNKVLQNIQELVTLDPSKSADLVVFHFTEEV
QQIISELQDDQLLFRFLSCLLEPRESYSDSILPLERDLHELLLDLLCRFSPHQLLSFLHT
SQHYRLEEAIQVTEKYRCNEARAFLLEKKGDVQGAFVVLLETLKDKLCLLTAESDGGQDG
GHDGGQDGGQDGGQDGGQDGGHDGGQDGGQDGGHDGGQDGGQDEEESTLTRVKDSLNDIL
AFCHRSCQNLSQEQRESLWFPLLDTMMASQKQVKGLKAKRISEVLKELTMKVLNCMSSFI
SLPAIIQQILQDPVYGKGKLAEIQGLILGMLDTFNYEQTLLETTTSLLNHDLHWSLAHLR
AAVTRGVHPRQDYCNICLQHYKRRQDSAEEIIVFSCGHLYHLQCLQQKDCGWGAASEVQQ
WWRCYKCSFSHGGMGGASTKPTRGRCTSLAQTHVTTVHHDTGAAAHRKKVFVETTLDLQQ
EQSWDQIRCLYRGPSRLSILSELSHCHSNEKTGFLIPAQPGTESFQLKLSPPPLLEE
NT seq 4314 nt   +upstreamnt  +downstreamnt
atgtcgcagtctccggacgcccgcagcctgatgtccgcctcgtcgcagctcaacctggtg
gaagtggactcgatcgatgataaagagtttgatattcctcaagtggatacaccgcccaca
ctggagagcatcctgagtgagttggaggatgaagacgaaccgtttgtgctggaggacacc
tgcgtggtcaacacagacaacatggatgctcactcctgtgacacctcgtctctggccagc
tcagacagtggagacccagcatacctgaaacgaaagaggaggacagtagatctgaatgca
acagttcacgggtctgtccttcgacacagcctgctgaagggcatctctgcacagatcgtc
tctgctgctgacaaagtggatgctggactgccaactgctatcacggtgtcgggggtgatc
gtggtgggaacgtctcacggtctggctctggtctttgagaccaaccaggctctgcgactc
tgtctgggcacgaagaccaccggagcggagttcggagccgtctctgccctgagcatcaac
catgactgctcgcgacttctctgcgggttcgccaaaggacagattacaatgtgggatcta
gccaatgggaagcttctgagaacgatcactgatgctcatcctccagggacagctgtactg
catgtgaagttcacagatgacccgactcttgcagtttgcaatgacagtggaggatccgtt
tttgaactggctttcaggagggtgatgggaatgcggtcatgtgactctcggtgtctcttc
agtggttctaaaggggaggtctgctgtgtcgaacctctgcgtgctcctccggacttcaga
gaccatcccatcacacactactctctgctggctatggcctctctcactaaaattctagtc
atcggactaaagcccactctgaaagtctggatgaccttcccttacagcaagtccgatccg
tccagtgtccctcagctgtcctggcagtttgttcctgttcagaaggcggtcaatcccatc
ctggctttttgcaaaggagatacagttcacttcctcctggtgaagaaggaggagacgggg
accatccatgtcatcaaacaaagacagctccacctcagctgtgacatcatcagcctcagt
tggatcaacagtcggactctggtcctggtggacagccatgagaagctgcaggttgtggac
cggcccagtcaggatgttctggagactctggacctggagcaggtgcagctggtctacaac
agccgacatttcaaatcgctggccaccggagggaatgtgtcccaggctttggctttagtc
ggagagaaagcctgctaccagtccgtctccagctacgcaggacagattatctatctgggc
accaagtcggctcacatcatggctctaaggaactggagagagcgtatcgactgcttcctg
aagcaggagcactttgtggaggctctctctctggcctggtccttccacgagggaactgct
aaggcggtggttggcctgtatggagatccgctgaagaggaaggccgtggtcagtgacaag
atggtcgagatcctcttccagttcgcagagtttgctctgaagaaatgtccagaacaaggc
aagatccaagtgatggagcagcacttccaggatgtggttccagtgctggtggactacagc
ctgctgctccagagggctgacctgctgttcaaccagctgtattcccggctgatggagaac
atggttgctaagggagtcttcctggagtcgttggagtcgtacatcattgctgaccgcctc
ggtcacatgaccactcccatcatgagggacctcctggcccattaccatggcaacggtctg
ttggacagcctggaaagatgtattgtccatctggatgtcaccagcctggacatccatcag
gtggttcaggtgtgttgggagaaccagctctatgatgcgatgatctacgtgttcaacagt
ggcatgaatgactacattactccgatggagaaactctttgcagtgattggcccaacactt
agggaggggaggagcctaacagatgaggacgtggtgatgggaaacaaacttctggtgtac
atcagctgctgtcttgcaggaagggcatatccccgaggaaacatccctgaagacctggtg
gtccaagtgaagcatcaggtgtttgagttcctgatccgtctccactcagctgattcttcg
gaggaggaggaagttttcccgtttattcacaccctccttcactttgacacgcgggagttt
ctgaacgtcctcgccatgacgtttgaagactttaagaacgacaagcaggcgctcgagtat
cagcagaggatagtggacatcttactgcaggtgatggtggacaacccagactttactccc
tcccaggtgggcgggctcttcacctttttggctcgccagttggccaagcccgacaacacc
ctttttgtaaacaggaagctgtttgatcaggttctggagtttctgtgttgcccagatgat
gattcccgacacactgagaggcagcaggttctgctggagctgctgcaggtcgggggtgtg
gtccagttcaatgaaggaaggctgctgactttggcagagaaggcaaagttctaccaaatc
tgtgaatttctttatgagaagaaacatctgtatgacaggatcatcgactgctacctgaaa
gaccccctcaggaagttggagattttctgctacatcgacagcctgctgtccatgccgggt
tacagctctgaggagaagcaaacagtgaagaacaaagtcctgcaaaatatacaggagctg
gtgacccttgaccccagcaaatcagctgatctagtggtgtttcatttcacagaggaggtg
cagcaaattatctctgagcttcaggatgaccagctcctcttcagattcctcagctgcctc
ttggagccacgagaaagttactcagactccatcctgcctctggaacgggacctccacgag
cttcttctggacttgctgtgccgtttttccccccatcagctcctcagcttcctccacacc
tcccagcactacagactggaggaggccatacaagtgacggagaagtaccgctgtaacgag
gccagagccttcctgctggagaagaagggagacgttcaaggagcgttcgttgttctgtta
gagacgctgaaggacaaactctgtctcctcactgctgagagcgatggaggacaggatgga
ggacatgatggaggacaggatggaggacaggatggaggacaggatggaggacaggatgga
ggacatgatggaggacaggatggaggacaggatggaggacatgatggaggacaggatgga
ggacaggatgaggaggagtcaacactaaccagagtcaaggattcactgaatgacatcctc
gctttctgtcatcgaagctgtcagaacctttcccaggaacaaagagagagtctgtggttt
cctcttctggacacaatgatggcttctcagaaacaagtgaagggactcaaagccaaacgg
atctctgaagtgctgaaggagctgacgatgaaggttctcaactgtatgagcagcttcatt
tctctgccggccatcattcaacaaatactgcaggacccagtttatgggaaaggaaaactg
gcggagattcaaggcctcattctggggatgttggacacttttaactacgaacagactttg
cttgaaacaaccaccagtctgttgaaccatgacctccactggtccctggctcacctgcgc
gctgctgtcacacggggagtccacccccgtcaggactactgtaacatctgtctgcagcac
tacaagaggaggcaggactcagcagaggaaatcatcgtgttcagctgtggccacctgtac
catctgcagtgtctgcagcagaaggactgtgggtggggcgctgcttcagaggtacagcag
tggtggagatgctacaagtgttccttcagtcatggaggaatgggcggggcttccaccaaa
ccaacaagaggccgctgcacgtctctggcacagactcatgttactacagtgcatcatgac
acgggagcagccgctcacaggaagaaggtgtttgttgagacgacgctggaccttcagcag
gaacagtcctgggatcagatacgctgtctgtaccgaggaccatccaggttgtccatcctt
tcagaactctcccactgccatagcaatgagaagacgggctttctaatcccagcccaacca
ggaacagagagtttccaactcaagctctctcctccacctctgttggaagaataa

DBGET integrated database retrieval system