Embiotoca jacksoni (black perch): 138214303
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Entry
138214303 CDS
T10523
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eja03041
]
138214303 (ddx27)
03009 Ribosome biogenesis [BR:
eja03009
]
138214303 (ddx27)
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138214303 (ddx27)
Spliceosome [BR:
eja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138214303 (ddx27)
Ribosome biogenesis [BR:
eja03009
]
Eukaryotic type
Pre-60S particles
Helicases
138214303 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
Cas3-like_C_2
FerA
Zip
Motif
Other DBs
NCBI-GeneID:
138214303
NCBI-ProteinID:
XP_069031899
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MLEQLGLIGTIRDEDQSPEEPDSGSDEEEETIILNRKRKLGIHGARDFNCDFDFGERDGP
ARDKDWPMADVLKQLKKKRTVTTLDQKIEKIRKKRKAEEKSSQSDAAEGSSGQSQVEEEE
DDEDVKTSAGQTDECDKDDDEEEEDEAEDDVEFGSSDEEILTKSDTLREKERRGRRRKAE
EEAPESFYEDASQYDDQLTFEDMNLSRPILKAVTALGFKQPTPIQKACVPVGLLGRDLCA
CAATGTGKTAAFMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITT
CLAVGGLDLKSQEAALRAGPDVLIATPGRLIDHLHNTPSFELTHIEILILDEADRMLDEY
FEEQMKEVIRLCSYNRQTMLFSATMTEEVKDLAAVSLKQPIRIFVNSNTDVAPFLRQEFV
RIRPHREGDREAVVAALLTRTFQDHVMVFTQTRKQAHRLHILLGLMGLKVGELHGELSQN
QRLENLRRFKDEQIDILVATDVAARGLDINGVKTVINFTMPSTVRHYVHRVGRTARAGRS
GRSVSLVGESERKTLKEVVKSAKNSVKARVLPPEVVLKFRDLINKLENDVGAVIKLEREE
RELAASEAKLSVAQKRLDGSSGESQRVWFQTQQERKQNRMSKALQDFDLALRGKKKREKF
LNDGRKKKEVTSEERAQFEILKAQMFAERAAKRERRPKRARVMDAEETPTTAANQKPGKG
GKKSVFDKELTNTSSKALKHYRGGPSFADRKRLGLDRKRPGLDRKRPGGSRFKK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacagctgggtctgatcgggacgatccgggacgaggaccagagtccggaagaa
cccgattccgggtccgacgaggaggaggaaacgatcatcctgaacaggaagagaaagttg
gggattcacggggcgagagactttaactgtgactttgacttcggagagagagacggaccg
gcccgggacaaagactggccgatggctgacgtcctgaaacagctaaagaaaaagagaact
gtgacaactttagaccagaaaatagagaaaatcaggaagaaaaggaaagctgaggagaaa
tcatctcagagcgacgctgctgaaggttcttcagggcagagccaggtggaggaagaggag
gacgatgaagatgttaagacttctgcaggacagactgatgagtgtgataaagatgatgat
gaggaggaggaggatgaagctgaagacgatgtggaatttggctccagtgatgaggagatt
ctgactaaatcagacaccctgagagagaaagagcgacgggggagaaggagaaaagcggaa
gaggaggctccagagtcgttctatgaagatgcgtctcagtacgacgaccagctgaccttc
gaggacatgaacctgtccagacccatcctgaaggccgttacagctctgggcttcaagcag
ccaactccgatccagaaggcttgtgttccggtcgggctgctgggtcgggacctgtgcgcc
tgcgctgctactgggacagggaagacggcggccttcatgttacccgtcttggagcgtttg
gtttataaacccaggacgtcccaggtgacccgtgtcttggttctggttcctactcgagag
ttggggatccaggttcactctgtggcccgtcagctggcccagttcacctccatcaccacc
tgcctggctgttggtgggttggacctgaagtctcaggaggcggcgctgagggcggggcca
gacgtcctgatagcaacaccggggaggctgatcgatcacctccacaacacgccgagcttc
gagctaacccacatcgagatcctcatcctggacgaggccgacaggatgctggacgagtac
tttgaagaacagatgaaggaggtgatccggttgtgttcctacaacagacagacgatgctg
ttctccgccaccatgacagaggaggtgaaggacctggccgcggtgtcgttgaagcagcca
atcaggatcttcgttaacagcaacaccgacgtggctccgttcctgcggcaggagttcgtc
cggatccgaccgcaccgtgagggagaccgagaggctgtggtggcagccctgctgacccgg
accttccaggaccacgtcatggtgttcactcagacccggaaacaggctcaccgattgcac
atcctgctgggactgatggggctgaaggtcggagaactgcacggagaactgagccagaac
cagagactagagaacctcaggcgttttaaagacgagcagatcgatatcttggtggcgaca
gatgttgcagctcgaggtcttgacatcaacggagtcaaaacggtgataaacttcaccatg
ccgtccacagtgagacattacgtccaccgagtgggccggacagctcgggccggccgttct
ggccgttctgtgtctctggtcggagagtcggagaggaagacgctgaaggaggtggtgaag
tcggccaagaacagcgtaaaggctcgagtcctgccgccagaagtcgttttgaagttcaga
gatctgatcaacaaactggagaatgacgtcggagcagtgataaagctggagagagaagaa
cgagagctggcagcttcggaggccaagttaagtgtggctcagaagcgcctcgatggctcc
tccggtgaatcacagagagtttggtttcagactcaacaagaaaggaaacagaaccgcatg
tcgaaggctctgcaggacttcgatctcgcgctgagggggaagaagaagagagaaaagttt
ctgaatgacggcaggaagaagaaagaagtgacgtctgaggagcgcgctcagtttgagatc
ctgaaggcccagatgtttgctgagcgggcggccaagagagagagacgaccgaagagagcg
agagtgatggacgccgaggagacgccgaccacagcagccaatcagaaaccaggaaaagga
ggaaagaagtctgtttttgataaagagctgacgaataccagcagcaaggctctgaaacac
tacagaggagggccttcctttgcggacagaaagcgtcttggtctggacaggaagcgtccc
ggtctggacaggaagcgtcccggtggctccaggttcaagaagtga
DBGET
integrated database retrieval system
