Embiotoca jacksoni (black perch): 138214435
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Entry
138214435 CDS
T10523
Symbol
skic2
Name
(RefSeq) superkiller complex protein 2 isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
Brite
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138214435 (skic2)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138214435 (skic2)
mRNA degradation factors
3'-5' decay
Ski complex
138214435 (skic2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138214435
NCBI-ProteinID:
XP_069032159
LinkDB
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Position
Unknown
AA seq
1298 aa
AA seq
DB search
MLATSEASTKTTLVATFSFHLQSGGHGQNQDVVCFCLVRSVSFVVLLLLFCCCFFSADVP
PVGPLDLPMSLLEMGCSGRFELITRPLPDQPLAPQSTLPHGLPPTSLTLETEVEKQFLRD
PAWLPIHDTDFAFQKFLKVTERKVNIASLLNCTPSALHSGLSVVRDPTTGMLLDFTEVLL
ENTGMSAKNSLSLQRQPGPPSESLRGSNTNYPFLPGGMEELTLDQIKNKSELETAIDFEN
DLLRVPPGLKAGMDFTDKDAKLAKPEVNLMSLLSTLEDIPDLQPEAEEKEEGKGSEEAPK
LPRTNSLEDLGIKDAVSSSSPPETGKEEKSKPKENPVENKKWAIPVNITSPCDDFYKRIP
NPAFKWPFELDVFQKQAVLRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSP
IKALSNQKFRDFKNTFGDVGLLTGDVQLSPESSCLIMTTEILRSMLYNGSEVIRDLEWVI
FDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKKHIYVISTM
KRPVPLEHYLYTGNSTKTQKEMFLLVDPAGNFMTKGYYTAVDAKKERTSKHAQSFGTKNT
SHSTTASQDRAVWLTLVHFLSRRQQTPVVAFTFSRTRCDDNARSLDSMDLTTSIEKAEIH
SFFQKSLSRLRGGDRQLPQILVMRDLLKRGIAVHHSGILPILKEVIEMLFSRGLVKVLFA
TETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGTVIILCKA
GVHEMAALHVMMLGKPTTLHSQFRLTYTMILNLLRVEALRVTDMMRRSFSESHRDTQAQE
KRISQLKRALSTLPPLDTEGQLSDLMPYYHTVTELRNTTEALQRAMLESVNGLKALSVGR
VVVVNNKQHLNALGVILQVSNDSVNRTFTALIICEKGNEEGEGNNNAAFPHLFNTALFIP
EGPCSHTVQKLKLQDVSGITVKTLKVIPDRIIDNYNKRQQPRFRHDPPGQAISTATQELL
RLAEASPGGKIATLDPVNDLQLKSMDVVEGSMRVRVLQDSLKDFNCIHSPTFAEQFARVK
ERMSVQEELDQLLFLVSDQSLTLLPEYHQRIKVLQSLQYVDSSGAVQLKGRVACQISSHE
LLLTELLFENVLSPLAPEESAALLSCLVFTQNTQVEPHITNTLQEGIKRVLSVAQRIGEL
QRDCGIPQTAEEFVGQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTVVRCIQRLDEVLK
EVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLYTH
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaacttccgaggcgtcaacaaaaactactttggtggcaacttttagctttcat
ttgcaaagtggggggcatggacagaatcaggatgtggtctgtttttgtttagtacgttca
gtctcctttgtggtgttgttgttgttgttttgttgttgttttttttctgcagatgtgccc
cctgtgggccccctggacctgccgatgtccctgctggagatgggatgctctggcagattt
gagctcatcacacgtcccctgccagaccagcctttagctccgcagagcacgcttcctcat
ggccttcctcccaccagcctgaccttggagacagaagtagagaaacagtttttacgggac
cctgcctggcttcctatacacgacacagactttgccttccagaagtttctcaaggtgact
gagaggaaggttaatatcgcctctctgctcaactgcactccgtctgcgcttcactctggt
ctttccgttgtcagagatccaaccacagggatgcttctggacttcacggaggtgttactg
gagaacacaggcatgtcagcaaagaactcgctgtcgttgcagcggcagcctggacctcct
tcagaaagcctccgaggaagcaacaccaactaccccttcctccccggagggatggaggaa
ctcactctggaccaaattaaaaataaatctgagctcgagacggcaatagattttgagaat
gatttactgagagtcccgcctggacttaaagctgggatggattttactgacaaagatgcc
aaattagcaaagccggaggtcaacctcatgtccctcctgtccacactggaagacatccct
gatcttcagcctgaggcagaggagaaggaggaaggcaaaggaagtgaagaagcccccaaa
ctacccagaacaaacagtctcgaagacttgggcatcaaggatgctgtgtcatcctcgtct
cccccggagacaggaaaagaggagaaatcaaagccaaaagagaatccggtggaaaacaag
aaatgggcaattcctgtcaacataacatcaccttgtgatgatttttataaacgcatcccc
aacccagcttttaagtggccgtttgagctggacgttttccagaaacaggctgtgctgagg
ctggaggctcacgactctgtgtttgtagctgcgcacacctccgctggcaaaacagtggtg
gccgagtacgccatcgctctctcacagaaacacatgacaaggaccatctacacgtctcct
atcaaggctctgtcaaaccagaagttcagagactttaaaaacacgtttggagatgttggc
ctcctgacgggcgacgtgcagctcagtcccgagtcttcctgtctcatcatgaccacagag
atcctcaggtctatgctttacaacggctcggaggtcatcagagacttggagtgggtgatc
ttcgatgaagtccactacattaacgacgccgagagaggagttgtgtgggaggaggttttg
attatgcttcctgatcacgtcagcatcattctccttagcgccacagtgccaaatgctctg
gagtttagcgagtggatcggtcgtattaagaaaaagcacatttatgtgatcagcacgatg
aagagaccagtgcctttggagcattatctgtacactggaaacagcaccaagactcagaaa
gagatgttcctgctcgtggacccagcaggaaacttcatgactaaagggtattacaccgcc
gtcgatgccaaaaaggagcgcaccagcaaacatgcccaatcatttggcacgaaaaacact
tctcacagcaccacagccagtcaggaccgagcagtgtggctcaccctcgtgcacttcctg
tctcgacggcagcagacgccggtggtcgcgttcaccttttcccggacgcggtgcgacgat
aatgcccgctcgctggactccatggacctgaccacctccatcgagaaggccgagatccac
tctttcttccagaagagcctgagtcgcctccgaggaggagaccggcagctgccgcagatc
ttggtcatgagggacctgttgaagagaggaatcgcagtccatcacagcgggatcctgccg
atcctgaaggaggtcattgagatgcttttctcacgaggtctcgtaaaggtgctgtttgcc
actgagacatttgcgatgggagtgaacatgcccgccaggaccgtggtgttcgacagcatc
aggaaacacgacgggaccggcttcagaaatctgctgccaggggaatacattcagatggcg
ggcagagcgggccggagaggcctggacgccaccggcactgtcatcatcctgtgcaaagcc
ggcgttcacgagatggcagctctgcatgtcatgatgctgggtaaacccaccaccctccac
tcccagttcagactgacctacactatgatcctcaacctgctgcgagtggaagccctccga
gtgaccgacatgatgaggaggagcttctctgaaagccacagggacactcaggcccaggag
aagaggatcagccagctgaagcgggcgttgtccactctgcctccgctggacacggagggc
cagctgtccgacctgatgccttactaccacaccgtgacggagctgcgaaacaccacagaa
gccctccaacgcgctatgctggagtctgtgaacggactgaaagctctgtcggtgggccga
gttgtggtggttaacaacaaacagcatctcaacgccctgggagtcattctgcaggtatct
aatgactcggtgaatcgcaccttcacggctctcattatctgcgagaagggcaacgaggaa
ggagaaggcaacaacaacgctgctttccctcacctcttcaacacggctctcttcatacct
gaaggcccttgcagccacacggttcagaagctgaagcttcaggacgtctcgggcatcacg
gtgaaaaccctcaaagtgattccagacaggatcattgataactacaacaagagacagcaa
ccgcggttcaggcatgaccctcccggccaagccatctccacagcaacgcaggagctcctg
cgattggccgaagccagccccggcggcaagatagcgaccctcgaccccgtgaacgacctg
cagctgaagagcatggatgtggtggagggctccatgagggtccgtgtgctgcaagacagc
ctcaaggatttcaactgcatccactcgcccacattcgcagagcagtttgctcgtgttaag
gagaggatgagtgtgcaggaggagctggaccagctgctgttcctggtgtcggaccagtct
ctgactctgctgcctgaataccaccagaggatcaaggtccttcagtccctccagtacgtc
gacagcagcggggcggtgcagctcaaaggccgcgtcgcttgtcagatcagcagccacgag
ctgctgctgaccgagctgctgttcgagaacgtcctgagcccgctggcgcccgaggagagc
gccgccctgctgtcctgtctggtcttcacgcagaacacgcaggtggagccgcacattacc
aacacgctgcaggagggcatcaagcgggtgctgtcagtggctcagcgtatcggagagctg
cagagggactgtgggataccgcagacagccgaggagtttgtaggccagttcaagtttggc
ctgacagaggtggtgtactgctgggccagaggcatgcccttcgccgagatcgcccagctg
actgacgtccaggagggcacggtggtccgctgcatccagcgcctggacgaggtgctgaag
gaggtgcgacaggccgcccgcatcgtgggagactccgtcctgggcagcaagatggagagg
gcgtccctggcaatccgcagggacatcgtcttcaccgcctccctctacacccactga
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