Embiotoca jacksoni (black perch): 138214529
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Entry
138214529 CDS
T10523
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
Brite
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138214529
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138214529
mRNA degradation factors
5'-3' decay
Decapping complex
138214529
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138214529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138214529
NCBI-ProteinID:
XP_069032330
LinkDB
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Position
Unknown
AA seq
489 aa
AA seq
DB search
MATARTENVGPVVMGLNKQNGQLRGQTKPASVQPAPTTQGKTLGALQKAGGAPQDGGGIK
FGDDWKKSLKLPPKDNRVKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESI
PIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAMVMVPTRELALQVSQISIQI
SKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDRVQMMVMDE
ADKLLSQDFVVLIEDIISFLAKNRQILLYSATFPISVQKFMAKHLQKPYEINLMEELTLK
GITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAK
MMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGR
FGHLGLAINLITSEDRFNLKAIEDQLVTDIKPIPSSIDKSLYVAECHSGSADCDVEEVEE
KPGRQQDSA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgccagaacggaaaacgttggcccggtcgtcatgggactgaacaagcagaac
gggcagctcagaggacagaccaaaccagcttcagtccagccagcacccacaactcaagga
aagactttgggtgctctgcagaaagccggcggcgcccctcaggacggaggagggatcaag
tttggagatgactggaaaaagagcctgaagctccctcccaaagacaacagggtcaaaacc
tcagatgtgacgtccactaaggggaatgagtttgaagattactgtctcaaaagagaactg
ctgatgggcatctttgagatgggttgggagaaaccttcccctatccaggaggagagtatt
cccatcgccctgtctggacgggacatcctggcccgggctaagaatggaacggggaaaagt
ggagcctatctcatcccactgctggagaggatagacctgaaaaaggaccacatacaggcg
atggtcatggtgcccactcgtgagctggcgctgcaggtgagccagatcagcatccagatc
agcaaacacctgggaggggtcaaagtcatggccaccacggggggcaccaacctgcgagat
gacatcatgcgcctggatgagaccgtgcacgtggtcatcgccacgcccggtcggatcctg
gacttaataaagaagggagtggcaaaggtggaccgggtccagatgatggtgatggacgag
gcggataagctgctgtctcaggacttcgtggtgctcatcgaggatatcatcagcttcctg
gccaagaacaggcagatcctgctctactctgcaaccttccccatcagcgtgcagaagttc
atggcgaagcaccttcagaaaccctacgagataaacctgatggaggagctgactctgaag
ggcattactcagtactacgcctacgtcaccgagaggcagaaagtccactgcctcaacacg
ctgttctccaggctccagatcaaccagtcaatcatcttctgtaactccactcagcgggtg
gagctgttggccaagaagatcactcagctgggctactcctgcttctacatccacgccaag
atgatgcaggaatacagaaaccgcgtgttccacgacttcagaaacggactgtgcagaaac
ttggtctgcaccgatctcttcaccagaggaatcgacatccaggcggtcaacgtggtcatc
aacttcgacttccccaagaacgctgagacgtacctgcatcgtatcggaagatcagggagg
ttcggtcacctgggcctggccataaacctgatcacgtccgaggaccgcttcaacctgaag
gccatcgaagaccagctggtgaccgacatcaagcccatccccagcagcatcgacaagagc
ctctacgtggccgagtgccactcaggcagcgccgactgcgacgtggaggaggtcgaggag
aaacccggccgccagcaggacagcgcctag
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