Embiotoca jacksoni (black perch): 138214578
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Entry
138214578 CDS
T10523
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eja04131
]
138214578 (vps50)
Membrane trafficking [BR:
eja04131
]
Protein recycling
Others
EARP complex
138214578 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
138214578
NCBI-ProteinID:
XP_069032408
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTGASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETTSTPDE
AAAAESDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSTFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSINYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAVSSTGLAQEELSLFQQYLQEGNPFEMHIEQKEEETED
VLASNGYESDELEKSAYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVSRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLSTAGGRDAGPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMEAVGE
NAGVHGPAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQ
HNVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatggcccgtcagggcctgaaaagcccccaggagagcatg
gcggacctcagtcctgtggagaacctgaggatcccaagcaaggaggagctgcgggagctg
agggagcagcccatcgacccacaggcggagcaggaaatcattgacagcatcgaggaggtc
tacttctcaaacgactccttcgacatggtgcagcatgaactggagaaactcccacctgag
ctgaacctgcaggagctggaggagtacagagacaagctgaagagacaacaggcagcagtt
tcaaaaaaagttgcagatcttattctggaaaaacagcctgcttatgtcaaggagctggaa
agagtgacggccttacagaccaacctgcagctcgcagcagtcatttgcactaatgcaagg
aggcaactgagtgtggcaaaagagggatttaccggggccagcctgggtttattggccaat
caaagaaggcgacaactgctgacaggcctgctcaagtccttgaggaccatcaagaccctg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagattatccaggtgcaatc
cagctctgccttgaatgtcagaaggctgccagcaccttcaaacactacagctgcatcagc
gaattgaattccaaactacaggacactctggagcaaatagaggagcagcttgacgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcgcactacaccaaggtccagctggcatac
acgctcctgggcaaaacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacagtgttccaagtggtactgggatatgttgagctgtgtgccggcaacgcc
gatacaaagttccagaagatgcagtacaaggacctgtgcacgcatatcaccccggacagc
tacattccctgcctgacagatctgtgcaaggccttgtgggaggtgatgctgagctaccat
cgcactatgcagtggcacgaggagcatgacaaacaggagaccacgtccactccagatgag
gctgcagcagcagagtctgatgagctggtggtggaccgcagctatgtaaagaagaagctt
gagcacggactgacacggatctggcaggatgtccagttaaaagtgaaggcctacatcctg
gggaccgacatgtcaaccttcaaatacgacgatttcatagtggtgctcgatgtcatcagc
aggttgatgcaggtgggtgaagagttctgtggcagtaagtccgaggtcctgcaggagtct
atcaaacgccagagtattaactactttaaaaactatcacagggctcgactggaagagctg
aggatgtttctggaaaatgagacgtgggaactgtgtccagtcaagtctaactttaacatc
gctcagctccatgagtttaagttcatgggccagtgccgctctccgtccgtttccccgagc
agacaggccgtgtcctccaccggcctggctcaggaggagctgtctctgttccagcagtac
cttcaggagggaaacccctttgagatgcacattgagcaaaaagaagaagagaccgaggat
gtgctggcatctaacgggtacgagtcagatgagctggagaagagcgcgtatcaggattac
gacagcgacagcgatgtccccgaggagctcaagcaggactacgttgatgagcagacaggt
gatgcccctctaaagagcgtgtcccgagagaccataagaagcaagaagaagtcagactac
aaccttaataagaccaatgcaccaattctcaccaacaccaccctcaacgtcatccggctg
gtcggaaagtacatgcagatgatgaacatcctgaagccgattgccttcgatgtcattcac
tgtgtatcacagctcttcgactactacctgtacgcagtatacaccttctttggacgcaat
gacatgcccgtcccaagcccgtccttgtctactgcgggtggcagagatgcgggccctgcc
agggtggtgggccctgcttgcttgtatgagtcatcaggtctgggccttatcagcagccga
ctgagaaccacactgaaccggatccaggagagcctcattgacatggaggctgtcggggag
aatgcaggagtccatggcccagcggaggacaggaaggagaaggtgcccagcccccatctc
agtcagctggtggtcctcactaacagtgggaccctgtacgggctggcacagagggtggtg
gccacggagtctcttgtgtttctggctgaacaatttgagtccctccagtcccacttggac
acaatgatgcctgctgccaagaagcccttcctgcagcagttttattcccagacggtgtct
acagccagtgaactacgaaaaccgatttactggatcgtggcagccaaggccatcgactat
gaacagatgctgctcatgatggccggagttaaatgggacattagggagataatgtcccag
cacaatgtatatgtggacgtcctattgaaggaatttgagcaatttaacaagcggctgggt
gatgtttccagacatgtgcgcatcccactgcctgtctccaacgtcctgtgggagcactgc
atccgcctggccaacaggactcttgtcgagggctacgctaatgtgaagaaatgcagcaac
gagggccgggccctgatgcagctggactttcaacagttcctgatgaagctggagaagctg
accgacctgcgacctatccctgacaaggagtttgttgaaacctacatcaaggcctattac
ctgactgagaacgatatggagcagttcatcaagaaccacagggagtactccatgaagcag
ctcgccaacttggtgaacgtgtgtctgggctcgcatataaacaaaaaggctcgtcagaaa
ctcctggcggccatcgatgatatcgacagacccaagagataa
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