KEGG   Embiotoca jacksoni (black perch): 138214616
Entry
138214616         CDS       T10523                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
eja  Embiotoca jacksoni (black perch)
Pathway
eja03082  ATP-dependent chromatin remodeling
eja03083  Polycomb repressive complex
eja04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:eja00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    138214616 (rbbp4)
   03083 Polycomb repressive complex
    138214616 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    138214616 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:eja03036]
    138214616 (rbbp4)
Chromosome and associated proteins [BR:eja03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     138214616 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     138214616 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     138214616 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     138214616 (rbbp4)
    PRC2.2
     138214616 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     138214616 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    138214616 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    138214616 (rbbp4)
   NuRF complex
    138214616 (rbbp4)
   NuRF complex (fruit fly)
    138214616 (rbbp4)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 CAF1C_H4-bd Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st DSE1_N Beta-prop_Aladin Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd EIF3I WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A Beta-prop_NOL10_N ASA1 CFAP251_N PAC11 MIOS_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 138214616
NCBI-ProteinID: XP_069032469
LinkDB
Position
Unknown
AA seq 424 aa
MADKEAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSQPASGECRPDLRLRGHQKEG
YGLSWNPNLSGSLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQRLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSTDP
EATA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcggacaaggaagctggtgcgtttgacgacgcagtggaggagagggtgatcaacgag
gagtacaagatctggaagaagaacactcccttcctgtacgacctggtgatgacccacgcc
ctggagtggcccagcctcaccgctcagtggctgcccgacgtctccaggccggaggggaaa
gattacagcgtgcacagactggtgttgggcacccacacgtctgatgagcagaaccacctg
gtcatcgccagcgtccagctgcccaacgacgacgcccagtttgacgcgtcgcactacgac
agcgaaaaaggagagtttggaggctttggctctgtgagcggcaagatcgagatagaaatc
aagatcaaccatgaaggagaggtgaaccgtgcccgctacatgccccagaacccctgcatc
atcgccacgaagacccccacctcagacgtgctggtgtttgactacaccaagcatccctcc
cagccagcttctggagagtgtcgtcctgatctgcgtctcagaggccatcagaaagaaggc
tatggtctgtcctggaatccaaatctgtccggctcgctccttagtgcctcagatgaccat
acaatctgtctgtgggacataagtgctgtgccaaaggagggcaagatagtggatgcaaag
acgatcttcacgggtcataccgccgtggtggaggacgtatcttggcacctgcttcacgag
tccctctttggatctgtagccgatgaccagagacttatgatttgggacactcgttcaaac
aatacctccaaacccagtcacgctgttgatgcccacacagccgaggtcaactgtttgtca
tttaacccttacagcgagttcatccttgcctccggctcagcagacaagactgtggctctt
tgggatttgagaaacctgaaactgaagctgcattcctttgagtcacacaaggatgagatc
tttcaggttcagtggtcccctcataatgaaacaatactggcatccagtggaacagaccgt
cgcctcaacgtctgggacctcagtaaaattggagaggagcagtcaccagaggatgctgag
gatggcccgcctgagctactgttcatccatggaggccacacagccaagatctctgacttt
tcttggaaccccaacgagccgtgggtcatctgctccgtgtctgaagacaacatcatgcaa
gtctggcaaatggctgagaacatctacaacgatgaagatcctgagggttcaacagaccct
gaagccacagcgtaa

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