Entry |
|
Name |
(RefSeq) probable histone deacetylase 1-B
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KO |
|
Organism |
eja Embiotoca jacksoni (black perch)
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Pathway |
eja03082 | ATP-dependent chromatin remodeling |
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Brite |
KEGG Orthology (KO) [BR:eja00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138214619
03083 Polycomb repressive complex
138214619
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138214619
04350 TGF-beta signaling pathway
138214619
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138214619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:eja03036]
138214619
Enzymes [BR:eja01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
138214619
Chromosome and associated proteins [BR:eja03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
138214619
HDAC complexes
Sin3A-HDAC complex
138214619
BRAF-HDAC complex
138214619
REST complex
138214619
SHIP complex
138214619
MiDAC complex
138214619
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
138214619
Heterochromatin formation proteins
Other heterochromatin formation proteins
138214619
Chromatin remodeling factors
NuRD complex
138214619
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
482 aa
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTYETAVALDCSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSADEDEEDPDKRISIRAHDKRIACEEEF
SDSEDEAEGHGGGRRNAANHKKVKRVKKEEEKEGEEKKEVKEEEKEEEKMDTTGPKEEVK
TT |
NT seq |
1449 nt +upstreamnt +downstreamnt
atggcgctgtctcaaggaacaaagaaaaaagtttgctactactatgacggggacgtgggg
aactactactacggccagggccatcccatgaaaccacacaggatccgcatgacgcacaac
ctcctcctcaactacggcctgtacaggaagatggagatctatagaccgcacaaagccagc
ggtgaagagatgaccaaataccacagtgacgactacattaagttcctgaggtccatccgg
ccggacaacatgtccgagtacagcaaacagatgcagagattcaacgtcggggaggactgt
ccagtgtttgatgggctctttgagttttgccagctgtcaacaggcggctccgtggctgga
gccgtgaagctgaacaagcagcagacagacatcgccatcaactgggccggcggactccat
cacgccaagaagtccgaggcgtccggtttctgctacgtcaacgacatcgtccttgccatc
ctcgagctgctcaaataccaccagagggtgttgtacatagatattgacatccaccacggt
gacggagtggaggaggcgttttacaccacagacagggtcatgacggtctctttccacaag
tatggagagtacttccccggcaccggagacctgagggacattggagcaggaaagggcaag
tactacgcagtaaactaccctctccgagacggcatcgatgacgagtcctacgaagccatc
ttcaagcctatcatggctaaagtcatggagatgtaccagccgagtgccgtggttctccag
tgtggagccgattctctgtctggagaccggctgggctgcttcaacctcaccatcaaaggc
cacgccaagtgcgtggagtacatcaaaagcttcaacctgcctctgctgatgctcggcggc
ggaggctacaccatccgcaacgtggcccgctgctggacctacgagaccgccgtggccttg
gactgctccatccccaacgagctgccctacaacgactactttgagtacttcgggcccgat
ttcaagctgcacatcagcccctccaacatgaccaaccagaacaccaacgagtacctggag
aagatcaaacagcggctgtttgaaaacctgcgcatgctgcctcacgcccccggagtccag
atgcaggccatccccgaggacgctcctcacccggacagcgcggacgaggacgaggaagac
cccgacaaacgcatctcgatccgggcccacgacaagaggatagcctgcgaggaagagttc
tccgactccgaggacgaggcggagggacacgggggcggccgcaggaacgcagccaatcac
aagaaggtgaaacgagtgaagaaggaggaagagaaggagggagaggagaagaaagaagtg
aaagaggaagagaaggaagaagagaagatggacacaaccggaccaaaagaggaggtgaag
acgacttga |