Embiotoca jacksoni (black perch): 138214638
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Entry
138214638 CDS
T10523
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04080
Neuroactive ligand-receptor interaction
eja04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138214638 (thrb)
04081 Hormone signaling
138214638 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138214638 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eja03310
]
138214638 (thrb)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138214638 (thrb)
Nuclear receptors [BR:
eja03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
138214638 (thrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
138214638
NCBI-ProteinID:
XP_069032496
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Position
Unknown
AA seq
415 aa
AA seq
DB search
MSEPAEKCSPRWKDEAIQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRKEELQKTVWDRLEPTQEEWDLIRMVTDAHMTTNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFYTSDQSAAGVKETKPEDIGQASMVNTPEGNKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLSSVERIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHLKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagcagaaaaatgctccccccgctggaaagatgaggccattcaaaatggg
tacataccgagttacctggacaaggatgagctatgtgtagtgtgcggggacaaggccaca
ggctatcactatcgctgcattacctgtgaaggttgcaagggattcttcaggcggacgatc
cagaagaacctgaacccaacctacgcctgtaagtatgaggggaaatgcgtcatcgacaaa
gtgaccagaaaccagtgccaggaatgtcgcttcaagaagtgcattgcggtgggaatggca
accgacttggtgctggacgacagcaagaggctggccaagcggaagctaatcgaggagaac
cgggagcgccgtcggaaggaggaactacagaagacggtgtgggaccgactggagccgacc
caggaggagtgggacctcatccgtatggtgacggacgcccatatgaccacgaacgcccag
ggcaaccactggaagcagaagcggaaattcctggtcgaggaagcaatgcttcttaatgaa
ataacatgtaatttattctatacttctgaccagagtgcagcgggggtgaaggaaactaag
ccagaggatattggtcaagcgtccatggttaatacacctgagggaaacaaagtggatata
gaagccttcagtcagtttacaaaaattatcacccctgccataacccgagtggtggacttt
gccaaaaaactgccaatgttttgtgagctgccttgtgaagaccagatcatcctgttgaaa
ggctgttgcatggagatcatgtcgctgcgagctgccgttcgttacgacccggagagcgag
accctcaccctcaacggcgagatggcggtcacgcggggtcagctcaagaacggaggcctg
ggcgtcgtctcggatgccatctttgacctcggcgtgtcgctgtcctcctttaacttggat
gactccgaggtggctcttctacaagctgtcatcctgctttcatccgatcgtccgggcctg
agtagcgtggagcgaatcgagcgctgccaagaggagttcctgctggcctttgaacattac
atcaactaccgcaaacacaaagtggcacatttctggcccaagctgctaatgaaggtgacg
gacctgcggatgattggcgcttgccacgccagccgattcctccacctgaaagtggagtgt
cccaccgagctattccctcctctcttcctggaggtcttcgaggactga
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