Embiotoca jacksoni (black perch): 138215017
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Entry
138215017 CDS
T10523
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138215017 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138215017 (arid1ab)
03021 Transcription machinery [BR:
eja03021
]
138215017 (arid1ab)
03036 Chromosome and associated proteins [BR:
eja03036
]
138215017 (arid1ab)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Helix-turn-helix
ARID
138215017 (arid1ab)
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138215017 (arid1ab)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138215017 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
138215017
NCBI-ProteinID:
XP_069033043
LinkDB
All DBs
Position
Unknown
AA seq
2359 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDTQEESVPGEKQHENKEPGPDGGSPGQKELQDGTDA
GNAGGGGDPDMKNGNGNLPRVNNNSSTQNDAGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGNQQPTSTPTLNQLLTSPSS
ARSYPNYPQGDYNNQEGANKGPGDLGSSQYGGVHPGWQQRTHHQPPMSPGNTGQPPNRNQ
PPSPMDQVGKMRGQPYGGPIPYSQQQQQQQGPPAGPGPQQAGSYAGQGYGPPGPQRYPMG
MQTRTPGAMGGMQYGQQMSTYGQQGPGGYGQQSQGYYGQHGPAPHPGQQQPPYAGQPQGT
SGPPFPQQGHPSQSPGQHGQPGPPYQQSQGPHGPPQGQPPYSQTPQSQPGQPPYVPPQQQ
QQPQQQPQQPQQQQQGTGPQSQQGPQGPQGPQGQSGYPQPAGPGQPPQQQTPQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQGPPQQQQQQQQPGGPSPQAQQPPGHGQQGQPSPY
SQTPPLQQQQQQQPQQQQQQQQQQQQQVSPYQRFPPPPQELSQDSFSSQSSAPPSNQPNK
SGQEDSMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHT
SPHLPGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDSIMHSSMNQSA
MGQDRVYMRNPQMPPYGSPGQPGSALSPRQSSGGQMHGGMGPYPQNNTMGNYGPQGAQYG
PQGRGFDSAHTDTHAAEQKVDTGYPRQPGYTGMPNANYPSGPGMGGSMNPMPGQGSGAPY
GGMPPGRIVPGQMAVRPYGPGMASNMAGMPPQVASGMCPPPGMNRKDGGPSMHHGPTNSI
HNRPPGYPNMSQGMMGTGSPYGPGMNSMHGMMNQGGPGPYPMGASMPNNTPGMAPSSEFG
MEKMTPAPKMNNKVEGTPKPESKKKSSSSTTTNEKITRLYELGPEPERKMWVDRYLAFAE
EKAMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSL
KKQYIQCLYAFECKIERGEDPPPDFFNTDTKKNQPKIQPPSPAGSGSLQGPQTPQSTSSS
MAEGGDLKPPTPASTPHTQMPPMPGVRSSVNLQDPFADGGDPAFSRRNAMTPNSQGFQPG
MGGPEMMGRMGPYEASKDPFGGMRKAGEQFMPPGPNSGMAEQYNRGPPGPMANMQMGQRQ
QYPYGYDRRQEPGMGPDGTMGPGAPQPNMMPSGADTGMYSPSRPPPQQRHDSYPNQYPGQ
GAPPGGPYPNQQPGMFPQQQPNYKRPVEGGYGPPAKRHEGEIYNVPYSGQQQPGPQPSGP
QGQQDMYNQYNAYPGGDRRPPGPQNQFPFPFGRERGPSSAGPNSQSPMPPQMMTSPMPSG
PDGPQGPMWQGRNEMGYPNYPNRQGPPVPGQGPGYHGMNRSEEMMPSDQRMNHEGPWPGH
VNQRQPPFGPAGSGPPMTRPLPSTYQTSQNHIPQVSSPAPMPRPMESRTSPSKSPYMHPG
IKVQKAGPPVPASHIGQAPVQQPMIRRDVAFPPGSLEASQPHLKPRRRLTVKDIGTPEAW
RVMMSLKSGLLAESTWALDTINILLYDDNSITTFNLCQLPGFLELVVEYFRRCLIEIFGI
LKEYEVGDPGQRTLIDPNAAEDSDDEIPIPEGEDMDTDEEDEEDEEVEEAKTNADTSSLV
QVKVEEESSQKDKSSEDEEEEKERESSTKEANSSTSGSSQDSNLHSEKPKQASKFDKLPI
KVVRKKNPFLLNHLSKLGQRQSFDSGLIHWSIGGGDTTEHIQTHFESRMELLKQRKRPPA
ATESRKKVQAIGTAAENQDKSKSGGEDKARQQPAQSSEPHKSPAEKTPPPPLPIGAPVTA
TIDDVLSARPGSVTEEVVRGCAEEQKENGKYLFSINPELQSRRNIKILEDEPHSKDETPL
STLSDWQDSLARRCICVSNIVRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQA
PVTYEKEEEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDG
LLHWAVCPSAEALDPFPTLGPHSSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKL
YGSLVRLVGERKVAVCREMAVVLLANLAQGDSLAARAIAVQKASVGNLLGFLEDSLAATQ
YQQSQSSLLQMQGGPQFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRLLDISVSPL
MNSLVSQVICDVLFLIGQS
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgcaagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggatcgggacacacaggaggagtcggtaccgggggagaaacagcatgaaaataag
gaaccgggacctgacggcggatctccaggccagaaggagctgcaggacgggaccgatgct
ggaaatgctgggggaggaggggatcctgacatgaagaacggaaacgggaatttaccccgg
gtaaataataatagcagtacccagaatgatgcgggcggacccgaagggaataaccatccc
gggatgggacaccatcacccgggcccctttcctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggctacccgaac
cattacaacaactacagcccgttccagaacaggacttcttatcagggccaagggtacggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcag
cagccagcaggaggaaccacagctatggctgcctcttataataaccagaggtataacatg
ggaaaccaacaaccgacgtctacgccaactttaaaccagctgctgacgtcgcccagctcg
gccaggagctacccgaactacccgcagggagactacaacaatcaggaaggggccaacaag
ggaccgggggatctgggcagcagtcagtacggtggggtccatccgggttggcaacaaagg
acccaccaccagccccccatgagcccgggaaacaccggacaacctccgaacaggaaccag
cctccaagcccgatggaccaggtagggaagatgcgtggccagccatatggaggacccatt
ccctactcccagcagcagcagcagcagcaagggcctcccgccgggcctggaccccagcag
gcgggctcttacgcagggcagggctacggacctccgggccctcagaggtatcctatgggg
atgcagacccgaacacctggcgccatgggcggcatgcagtatggacagcagatgtccacc
tatggacagcagggcccaggaggctacggccagcaaagccagggctactacggtcagcat
ggcccggctcctcaccccggccagcagcagcctccgtacgctggccagccccagggcacc
tccggacctcccttcccccagcagggccacccctcgcagtcccctggccaacacggacaa
ccagggcccccttatcaacaatcacagggtccccacggccctcctcaaggtcagccgccc
tacagccagaccccacagtctcagccaggacagccaccctacgtccctccccagcagcag
cagcagcctcaacagcagccgcagcagccgcagcagcagcagcaaggtactggtcctcaa
agtcagcagggcccccagggtccccagggcccccagggccagtccgggtacccacagcct
gctggaccagggcagccaccacagcagcaaaccccgcagcagcagcagcagcagcagcag
cagcagcaacaacaacaacaacaacaacaacaacagcagcagcaacaacagcagcagcag
caacaacaacaacaacaagggcccccacaacaacaacagcaacagcaacaaccaggagga
ccgtctcctcaagcccagcagcctccaggtcacggccagcagggtcaaccatcaccttac
tcccagacacccccactgcaacagcagcagcagcaacaaccacagcagcaacagcagcaa
caacaacaacaacaacaacaagtgtcaccatatcagaggttcccgcctcctccacaggaa
ctatcccaggactccttcagctcccagtccagcgctcctccttcgaaccagcccaacaag
agcggtcaggaagacagcatgcaggggcggccatccagtctgccggacctgtccggctcc
atcgacgacctgcccaccggtacggagggcgccctgagcccgggcgtcagcacctcgggg
gtgtccagcagtcagggcgagcagagcaacccggcgcagtctcccttctccccgcacact
tcgccccacctgccgggcatccgcgggccctcgccatcacccgtgggctccccggccagc
gtcaccccttcacgcaccggccctctctcccccgctgctgtgccaggtaatcagatgccg
ccgcggccgcccagcgtccagtcggacagcatcatgcactcttccatgaaccagtcagcc
atgggccaggacagggtgtacatgcgtaaccctcagatgcctccttacgggtcccctgga
caacctggctccgccttatctccacgccagtcttcgggaggccagatgcatggtgggatg
ggaccttatccccagaacaataccatgggaaactacggccctcagggggcccagtacggc
ccacaagggcggggctttgactcggctcacactgacacgcacgcagcagaacagaaggtg
gacacaggttatcccaggcagcccggctacacggggatgcccaacgccaactaccccagc
ggccccggcatgggaggctccatgaaccccatgcccggtcagggcagcggggctccgtac
ggaggcatgcctcctggcaggatagttcccgggcagatggctgtccggccctacggcccc
ggcatggcctccaacatggccggcatgcctcctcaggtggcctccggcatgtgcccccct
ccgggcatgaacaggaaggacggtggcccctccatgcaccacggacccacaaactccata
cacaacaggccgcccggctacccgaacatgtcccagggcatgatgggaacaggctctccg
tacggcccaggcatgaacagcatgcacggtatgatgaaccagggagggcccgggccttat
ccgatgggagcgagcatgcccaacaacacccccggaatggctcccagttcggagtttggc
atggagaagatgaccccggccccgaaaatgaacaacaaagtggaagggactcccaagccg
gagtctaaaaagaagtcgagctcttccaccaccactaatgagaagatcactcgtctgtac
gagctcggcccggagccagagaggaagatgtgggtggaccggtacctggccttcgccgag
gagaaggccatgggcatgaacaacctgcccgccgtgggccgcaagcctctcgacctcttc
aggctctacgtgtccgtcaaagagatcggcggcctcacgcaggtgaacaagaacaagaag
tggcgggagctggccaccaacctgaacgtgggcacgtcgagcagcgccgccagctcgctc
aagaaacagtacatccagtgtttgtacgccttcgagtgcaagatcgagcgcggcgaggac
ccgcctccggacttcttcaacacggacaccaaaaagaaccagcccaagatccagccgccg
agcccagctggatccggatccctgcaaggaccccagactccgcagtccaccagtagttcg
atggcagaggggggagacctgaagccccccaccccggcctccaccccgcacacgcaaatg
cctccaatgcccggcgtcaggagtagtgttaatctgcaggaccccttcgccgatggcgga
gacccagccttctccagaaggaacgccatgactcccaactctcagggcttccagcccggg
atgggcggcccggagatgatggggcggatgggtccctacgaggcctccaaggaccccttc
ggaggcatgaggaaagctggagaacagttcatgccgccgggccccaacagtggaatggcg
gagcagtacaacagaggcccaccgggcccaatggccaacatgcagatgggccagaggcaa
cagtacccatatggatatgaccgaagacaggagccaggtatgggccctgacggcaccatg
ggaccaggagctcctcagcccaacatgatgccttctggagcggacacagggatgtactcg
ccgagccgtcctccaccacagcaacggcatgactcttatccaaatcagtaccctggccaa
ggagcgccccctggtggcccgtacccgaatcaacagccaggaatgtttccacagcagcaa
ccgaactacaagcgtcctgtcgagggagggtacggtcctccagccaagcgccatgaggga
gagatttacaacgttccttacagcggtcagcagcagccaggaccgcagccctcggggccc
cagggccagcaggacatgtataaccagtacaatgcgtaccctggaggggaccgcagacca
ccaggcccacagaaccagttccccttccctttcggacgggagcgagggccgtcgtccgcc
ggccccaattcccagtctcctatgcctccccagatgatgaccagccccatgccttcgggt
cccgacggcccccagggcccaatgtggcagggccgcaatgagatgggctatcccaactat
cccaaccgacagggacctcctgtaccgggccagggtcccggctaccacggcatgaaccgc
tcagaggagatgatgccatcagaccagcgcatgaaccacgaggggccgtggcccggacac
gtcaaccagcggcagccgccgttcggtcccgccgggtccggaccgcccatgaccagaccc
ctgccctccacctaccagacttcccagaaccacattcctcaggtgtcgagcccagcgccc
atgccgcgtcccatggaaagcaggacgtcgcccagcaagtcgccctacatgcatcctggc
atcaaggtgcagaaagcgggccctccagtgcccgcctcccacatcggccaggcccccgtg
cagcaacccatgatccggcgagatgtggccttcccgccgggctccctggaggcgtcccaa
ccccacctcaaaccccgcaggcggctcaccgtcaaagacatcggtactcctgaggcttgg
agagtaatgatgtcactaaagtcaggcctgttagctgaaagcacctgggccttggacacc
attaacattttactgtacgacgacaatagcattactactttcaacctgtgccagctacct
ggtttcttggagctggtggtggagtacttcagacgctgcctcatcgagatcttcggcatc
ttgaaggagtacgaagtaggagaccccggccagcgcaccctaatagaccccaacgcagcg
gaggactcggatgacgaaatccccattcctgagggcgaggacatggacacggacgaggag
gacgaggaggacgaagaggtagaggaagccaagaccaatgccgacacctcctcgctggtc
caggtgaaagtggaggaggagagctcccagaaagataagtcttcagaggatgaggaagag
gagaaggaaagggagtcctctaccaaggaagccaatagctctacctcagggtcctcccag
gactccaacctccactcggaaaagcccaagcaggctagcaagtttgataaacttcccatc
aaggtggtgcggaagaagaaccccttcctgttgaaccacttgtccaagctcgggcagcgg
cagagcttcgacagcggcctgatacactggagcatcggtggtggcgacactactgagcac
atccagacccacttcgagagccggatggagcttctcaagcagcggaaacgcccgccagca
gccaccgagagccgcaagaaggtccaggcgatcgggacggccgcagaaaaccaagacaaa
tccaagtccggcggggaggacaaggcccgacagcagccggcccagtcctctgaacctcac
aagtctccggcggagaagaccccacctcctcctcttcccattggcgcgccggtcactgcc
accatcgacgatgtactatctgcccgcccggggtcggtcacagaggaagtggttcgcgga
tgtgctgaggagcagaaggagaacggcaagtacctgttcagcatcaacccggagctccag
agccgccgcaacatcaagatcctggaagacgagcctcacagcaaggacgagacgccgctc
agcaccctgtcggactggcaggactctctagcccggcgctgcatctgcgtttccaacatc
gtgcggagcctctccttcgtccccggcaacgacctggagatgtcgaaacacccgggcctc
ctgctgctgctgggccgcctggtgctgctccaccacaggcaccccgaacgcaaacaggcg
ccggtcacctacgagaaggaggaggaggaagacgagggcgtgagctgcgagagagacgag
tggtggtgggactgcctcgaggtgttgagggagaactgcttggtcactctggccaacatc
tcgggccagctggacctttctatctacccggagagtatatgcctgccgctgctggacggc
ctgctccactgggccgtgtgcccttcggcggaggccctggaccccttccccacgctgggg
ccgcacagctccctttcgccccagagactggtcctcgagaccctcagcaagctcagcatc
caggacaacaatgtcgacctcattctggcaacgccgcccttcagccgtctggagaagctc
tacggctcgctggtgcgcctcgtcggcgagcgcaaggtggccgtgtgccgggaaatggcg
gtcgtcctgctggctaacttggcccagggcgacagcctggcggcgcgggccatcgccgtg
cagaaagccagcgtggggaacctactgggcttcctggaggacagcttagcggccacgcag
taccagcagagccagagctccctgctacaaatgcagggcgggccccagtttgagcccacg
agcgtggacatgatgcggcgggcggcgcgcgccctgcacgccctggcgaaggtagaagaa
aaccactcggagttcacgttgtacgagtcgcggctactggacatctcggtgtccccgctt
atgaactctctggtgtcccaagtaatctgtgacgtactgtttctgattggccagtcatga
DBGET
integrated database retrieval system
