Embiotoca jacksoni (black perch): 138215534
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Entry
138215534 CDS
T10523
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03083
Polycomb repressive complex
eja04980
Cobalamin transport and metabolism
eja05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138215534 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
138215534 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138215534 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eja01009
]
138215534 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eja03036
]
138215534 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
eja03029
]
138215534 (hcfc1b)
Protein phosphatases and associated proteins [BR:
eja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138215534 (hcfc1b)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
138215534 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
138215534 (hcfc1b)
MLL-HCF complex
138215534 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
138215534 (hcfc1b)
Mitochondrial biogenesis [BR:
eja03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
138215534 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
138215534
NCBI-ProteinID:
XP_069033856
LinkDB
All DBs
Position
Unknown
AA seq
1634 aa
AA seq
DB search
MASEPAVLQPRWKRVLGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATN
QWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNELYELQASRWEWKRLKAKA
PKNGPPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSVVGW
EIPATSGQAPPPRESHTAVVTSGRGTNRLIIYGGMSGCRLGDLWVLDIDSLVWSKPSLNG
IAPLPRSLHSATTINNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMCWETV
LMDSVEENIPRARAGHCSAAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETERPCAPSR
VQLVRANTASLEVSWGPSQTADTYLLQLQRYDIPATPATASPASSPAPNPVPTALAPGAS
SPKSPAPVAATPVNQQVPLSGITLVPSPTASLPGSPLAAGVKVPAVLKVGAAALGTAGGA
AVVTVRQAAPKPPVAVTTLPAGLRMVVPAQPGQTAIGSSPQMSGMAALAAAAAATQKIPP
STATMLNVPAGATIVKTVAVSPGSSSLPAKVVAPVTVVSNPATRMLKTAAAHVGGASVVS
TPGTPGRPIITVHKSGTVTVSQQAQVVTTMVGGVTKTLTLVNSPLGMGGGGALIGNLGNL
GKVVSLVQNKALQSGSMTGQIGSSSMAQILQTKGALPPGTILKLVTSADGKQTTILSTTQ
SGATATKPTILGVAPSTSKPGTTIIKTIPMSALQGGTGGNSPITYLTTKMVTPGTAGKII
TTVPKISAGGQQGVTQVVLKGAPGTPGTILRTVPMSGVRLVSPGIAGSKPTVMVVKATTG
KHGVSSLGTVTGTVSNMVAGGAGAAVNASLATPTTTLATIATLASPVTTVTASGPKQVTL
ITTPSGAEAQPLVQDLPVSIMASPTSEEPGSTTSTTTTTTAEGEGTGTTVMLVCSNPPCE
THETGTTNTATVATATMGGGDRVCSNPPCETHETGTTNTATVATATMGGGDRVCSNPPCE
THETGTTNTATVATATMGGGDRVCSNPPCETHETGTTNTATTAGAGGVRQVCSNPPCETH
ETGTTNTATTATAQQGGDNLPGDSTDSSSSDPAPSTTANQSRAVTTVTQATPTPGPSIPE
ISSLIGEDRAESSEAVALVTAAAAEEEEPMQTDSQSEAVMSSAAAVLQVHVEGSEAAAQM
ASSDSGLPQELMSSEGDGTEMVSGTTATLMVTAGLTPDQLAVAMATEEAAQQAAIQAAQQ
AAQQAAQQAAIQAVLQAVGHIGDPEASLDRTIPIILTQQELAALVLQQQQLQDIHNQLEP
EPEPEPEPQHSSVPTEGLAPADSLNDPTAESNGHELTSSAVTSAVARLASTFGPAPTMTA
GQVKVQAALTEATNGVAATAAKQNFAVKSAVKESRWFDVGIVKVTNMVVTHFYIPDDDNM
ADDDSGVMPDYSQMRKAELQPGTAYKFRVAGINICGRGTFSEVSAFKTCLPGFPGAPCAI
KISKNLDGAQLTWEPPAVTSGQITEYSVYLAIQSSQATSASGSGPAQLAFMRVYCGRNPS
CLVQASSLANAHIDYTTKPAIIFRIAARNQKGYGPATQVRWLQETSKDAKPAVKRPGASP
DFKPAGPKKFRTDQ
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgaacccgcggtgctgcagccccgctggaagcgcgtcttgggctggaccggg
ccggtgccgcggccccggcacggacaccgagccgtggccatcaaggagctgatggtggtg
ttcggcggggggaacgagggcatcgtggacgagctgcacgtctacaacacggccaccaac
cagtggttcatcccggcggtccgcggtgacgtcccacccggctgcgccgcctacggcttt
gtgtgcgacgggacgcggctgctggtgttcggggggatggtggagtacggcaaatacagc
aacgagctgtacgagctgcaggcgagtcgttgggagtggaaacgactgaaagccaaggcc
ccgaagaacggcccgcccccatgcccccgcctcggacacagcttctccctgattggcagc
cgctgctacctgttcggaggactggccaatgacagcgaagatcccaagaacaacatcccc
aggtacctgaacgacctgtactgcctggagctgcggccgggctccagcgtggtcggctgg
gagatcccggcgacgtccggccaggcgccaccaccccgagagagtcacacagcggtggtg
acgagcggccgtggcaccaaccggctgatcatctacggcgggatgagcggctgccggctg
ggagacctctgggtcctcgacatcgactcgctggtgtggagcaaaccgtctctcaacggg
atcgcccccctcccccgcagcctgcactccgccaccaccatcaacaacaagatgtacgtg
ttcggtggttgggttcctctggtgatggacgacgtgaaagtggcgactcacgagaaggag
tggaagtgtaccaacacactggcctgcctcaacctggactccatgtgctgggagacggtg
ctgatggacagcgtggaggagaacatcccccgagctcgagcgggtcactgcagcgccgcc
atcaactcccgactttacatctggagcggccgcgacggctacaggaaggcctggaacaac
caggtgtgctgcaaggacctgtggtacctggagacagagcgtccgtgcgccccgtcccgg
gtgcagctggtccgggccaacacggcgtccctggaggtgagctggggaccgtctcagacc
gccgacacctacctgctgcagctgcagaggtacgacatccccgccacacctgcgaccgcc
tcgcccgcctccagccccgcccccaaccccgtcccgaccgccctcgcacccggggccagc
tcccccaagagccccgcccccgtcgccgcaacaccagtcaaccagcaggtcccgctgtcc
ggcatcacgctggtcccctcccccaccgcctctttacccggaagcccattggctgctggg
gtcaaagtgccagctgtcctgaaggtgggagcagcagctctggggacagcgggcggagcc
gcggtcgtcaccgtgaggcaggccgcgcccaagccgccggttgccgtgacgacacttccc
gccggcctccgtatggtggtacccgcccagcccggtcagacggcaatcggcagcagtccc
cagatgagcggcatggcggcgctggcggccgcggcggcggcgactcaaaagattcctccg
tccacagcgacgatgctgaatgtccccgccggagcaacgatcgtgaagacggtcgccgtc
agtccagggtccagcagtctgccggctaaagtggtcgccccggttaccgtggtgagtaac
ccggccactcgaatgttgaagacggccgccgctcacgtgggcggggcctctgtagtctcc
acccccggcaccccgggccgaccgatcatcacggtccacaagtcgggcacggtgacggtc
tcccagcaggctcaggtggtcaccacgatggtgggcggagtcacgaagaccctcacgctc
gtcaacagtccactgggcatgggaggaggcggggctctgatcggtaacctcggtaacctg
gggaaggtggtgtcgctggtccagaacaaagcgcttcagagcggatcgatgacgggtcag
attgggagcagctcaatggcccagatcctccagacgaagggcgccctaccgccgggaacc
atcctgaagctggtgacgtcagcagacgggaagcagaccaccatcctcagcaccacgcag
tcgggagccacggcaaccaaacccaccatcctgggcgtcgccccgtcaacctccaaaccc
ggaaccaccatcatcaagaccatcccgatgtcggccctacagggggggacaggagggaac
agtccaatcacctacctcactaccaagatggtaactccaggaaccgccggaaagatcatc
accaccgttccaaaaatctctgcagggggccagcagggggtcacacaggtggtgttgaaa
ggagctccaggtacgccgggtacgatcctcagaaccgtcccgatgagcggagtccgactg
gtgtcaccgggaattgccggctccaaacccaccgtcatggtcgtcaaggcaaccacaggt
aaacacggtgtctccagcctcgggacggtaaccggtactgtctccaacatggtggcgggc
ggagccggcgctgcggtcaacgcctccctggccacgcccaccaccaccctggcgaccatc
gccaccctggccagcccggtcaccacggtaactgcctcaggaccgaaacaggtgactctg
atcacgaccccgagcggcgccgaggctcagccgctagtccaggatctgcccgtctccatc
atggcttctccgacctccgaggaaccaggaagtactacgagtactacgaccactactacc
gcggagggggaggggacaggtactacagtgatgctggtgtgctccaacccgccgtgcgag
acccacgagacggggacgaccaatactgccacagtcgccacagcaaccatgggtggaggc
gacagagtgtgctccaacccgccctgcgagacccacgagacggggacgaccaacacggcc
acggtcgccacggcaaccatgggcggaggcgacagagtgtgctccaacccgccctgcgag
acccacgagacggggacgaccaacacggccacggtcgccacggcaaccatgggcggaggc
gacagagtgtgctccaacccgccctgcgagacccacgagaccggaaccaccaacaccgcc
accacggctggagccggaggggtccgacaggtttgctccaacccgccgtgcgagacccac
gagaccggaaccaccaacaccgccaccacggcgacagctcagcagggcggagacaacctg
ccgggagactccacagactcctcctcctctgatcctgccccctccaccacagccaatcag
agcagagcggttaccacagttacgcaggccacgcccacacctggaccatccatacctgag
atctcctcgttgatcggagaggacagggcagagtcctcagaggccgtcgccttggtgacg
gcggcagcagctgaggaggaggagcctatgcagacggacagccaatcagaggctgtgatg
tcatcggcagctgcagtgctgcaggttcatgtggagggcagcgaggcggcggcacagatg
gcgtcctcagacagcggtcttcctcaggagctgatgtcatcagaaggggacggcaccgag
atggtctcggggacgacggcaaccctgatggtgacggcgggactgaccccggatcagctg
gcggtcgccatggcaacagaggaggcggctcagcaggcggcgatacaggcggctcagcag
gcagctcagcaggcggctcagcaggcggcgatacaggcggtcctgcaggcagtgggacac
atcggcgaccccgaggcgtccctggatcggaccatccccatcattctgacccagcaggag
ctggcagcgttggttctacagcagcagcagctgcaggacatccacaaccaactggaacca
gaaccagaaccagaaccagaaccgcagcacagcagcgtccccacagagggccttgctcca
gccgacagcctcaacgacccgacggcggagagcaacggacacgagctcacgtcgtcagcg
gtaacgagcgccgtcgcccgattggccagcacgtttggccccgccccaaccatgacggcg
ggtcaggtgaaggttcaggcggcgctgacggaggcgaccaatggcgtcgcagcgacggcg
gcgaagcagaacttcgcggtgaagtcggccgtgaaggaaagtcgctggttcgacgtcggc
atcgttaaagtcaccaacatggtcgtcacgcatttctacatccccgacgacgacaacatg
gccgacgacgactccggcgtgatgccagactacagtcagatgaggaaggcggagcttcag
ccggggaccgcctacaagttccgcgtcgccgggatcaacatctgcggccgcggcacgttc
tccgaggtgtctgcgttcaagacgtgtctgcccgggttccccggagcgccgtgcgccatc
aagatcagcaagaacctggacggagcccagctcacctgggagccgcccgccgtcacgtcg
gggcagatcaccgagtactcggtgtacctggccatccagtccagccaggccacctccgcc
tcgggttccggcccggcccagctggccttcatgagggtgtactgcggccgcaacccgtcc
tgcctggtccaggcgtcgagcctcgccaacgcccacatcgactacaccaccaagcccgcc
atcatcttccgcatcgccgcgcgcaaccagaagggctacgggcccgccacgcaggtccgg
tggctgcaagaaaccagtaaagatgccaaaccggcggtgaagcgacccggagcgtcgcct
gactttaaacctgccggaccaaagaagttcagaaccgaccaatag
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